RNA–Protein interactions for RNA: ENST00000514393.5

ATR-207, Transcript of ATR serine/threonine kinase, humanhuman

TSL 4

Gene ATR, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-207ENST00000514393 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
ATR-207ENST00000514393 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
ATR-207ENST00000514393 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
ATR-207ENST00000514393 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
ATR-207ENST00000514393 FOXD1Q16676 465 aa17.4■□□□□ 0.38
ATR-207ENST00000514393 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
ATR-207ENST00000514393 MSH5O43196 834 aa16.51■□□□□ 0.23
ATR-207ENST00000514393 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
ATR-207ENST00000514393 PIAS4Q8N2W9 510 aaPredicted RBP16.22■□□□□ 0.19
ATR-207ENST00000514393 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
ATR-207ENST00000514393 ADRA2BP18089 450 aa15.95■□□□□ 0.14
ATR-207ENST00000514393 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
ATR-207ENST00000514393 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
ATR-207ENST00000514393 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
ATR-207ENST00000514393 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
ATR-207ENST00000514393 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
ATR-207ENST00000514393 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
ATR-207ENST00000514393 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
ATR-207ENST00000514393 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
ATR-207ENST00000514393 RNF39Q9H2S5 420 aa14□□□□□ -0.17
ATR-207ENST00000514393 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
ATR-207ENST00000514393 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
ATR-207ENST00000514393 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
ATR-207ENST00000514393 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
ATR-207ENST00000514393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATR-207ENST00000514393 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
ATR-207ENST00000514393 NISCHQ9Y2I1 1504 aa13.11□□□□□ -0.31
ATR-207ENST00000514393 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
ATR-207ENST00000514393 CAPN15O75808 1086 aa13.01□□□□□ -0.33
ATR-207ENST00000514393 DSG3P32926 999 aa12.99□□□□□ -0.33
ATR-207ENST00000514393 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
ATR-207ENST00000514393 POTEHQ6S545 545 aa12.92□□□□□ -0.34
ATR-207ENST00000514393 APLP2Q06481 763 aa12.86□□□□□ -0.35
ATR-207ENST00000514393 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
ATR-207ENST00000514393 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
ATR-207ENST00000514393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
ATR-207ENST00000514393 KCNA4P22459 653 aa12.75□□□□□ -0.37
ATR-207ENST00000514393 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
ATR-207ENST00000514393 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
ATR-207ENST00000514393 ABCB7O75027 752 aa12.63□□□□□ -0.39
ATR-207ENST00000514393 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
ATR-207ENST00000514393 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
ATR-207ENST00000514393 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
ATR-207ENST00000514393 POLA2Q14181 598 aa12.32□□□□□ -0.44
ATR-207ENST00000514393 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
ATR-207ENST00000514393 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
ATR-207ENST00000514393 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
ATR-207ENST00000514393 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
ATR-207ENST00000514393 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
ATR-207ENST00000514393 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
ATR-207ENST00000514393 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
ATR-207ENST00000514393 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
ATR-207ENST00000514393 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
ATR-207ENST00000514393 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
ATR-207ENST00000514393 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
ATR-207ENST00000514393 HAX1O00165 279 aa11.8□□□□□ -0.52
ATR-207ENST00000514393 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
ATR-207ENST00000514393 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
ATR-207ENST00000514393 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
ATR-207ENST00000514393 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
ATR-207ENST00000514393 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
ATR-207ENST00000514393 FBLN2P98095 1184 aa11.7□□□□□ -0.54
ATR-207ENST00000514393 ZBTB22O15209 634 aa11.67□□□□□ -0.54
ATR-207ENST00000514393 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
ATR-207ENST00000514393 PRKAR2AP13861 404 aaKnown RBP11.53□□□□□ -0.56
ATR-207ENST00000514393 EVX2Q03828 476 aa11.52□□□□□ -0.57
ATR-207ENST00000514393 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
ATR-207ENST00000514393 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
ATR-207ENST00000514393 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
ATR-207ENST00000514393 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
ATR-207ENST00000514393 C19orf67A6NJJ6 358 aa11.43□□□□□ -0.58
ATR-207ENST00000514393 GABBR2O75899 941 aa11.32□□□□□ -0.6
ATR-207ENST00000514393 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
ATR-207ENST00000514393 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
ATR-207ENST00000514393 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
ATR-207ENST00000514393 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATR-207ENST00000514393 LHX8Q68G74 356 aa11.23□□□□□ -0.61
ATR-207ENST00000514393 CLCN6P51797 869 aa11.2□□□□□ -0.62
ATR-207ENST00000514393 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
ATR-207ENST00000514393 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
ATR-207ENST00000514393 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
ATR-207ENST00000514393 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
ATR-207ENST00000514393 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
ATR-207ENST00000514393 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
ATR-207ENST00000514393 ZNF579Q8NAF0 562 aaKnown RBP10.98□□□□□ -0.65
ATR-207ENST00000514393 DCAF1Q9Y4B6 1507 aa10.94□□□□□ -0.66
ATR-207ENST00000514393 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
ATR-207ENST00000514393 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
ATR-207ENST00000514393 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
ATR-207ENST00000514393 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
ATR-207ENST00000514393 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
ATR-207ENST00000514393 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
ATR-207ENST00000514393 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
ATR-207ENST00000514393 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
ATR-207ENST00000514393 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
ATR-207ENST00000514393 PLSCR2Q9NRY7 297 aa10.73□□□□□ -0.69
ATR-207ENST00000514393 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
ATR-207ENST00000514393 OTUD5Q96G74 571 aa10.71□□□□□ -0.69
ATR-207ENST00000514393 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
ATR-207ENST00000514393 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms