RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
CAST-240ENST00000514055 RANGAP1P46060 587 aaPredicted RBP14.57□□□□□ -0.08
CAST-240ENST00000514055 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
CAST-240ENST00000514055 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
CAST-240ENST00000514055 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
CAST-240ENST00000514055 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
CAST-240ENST00000514055 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
CAST-240ENST00000514055 SCAPERQ9BY12 1400 aa14.54□□□□□ -0.08
CAST-240ENST00000514055 LTBP4Q8N2S1 1624 aa14.53□□□□□ -0.08
CAST-240ENST00000514055 CFAP74Q9C0B2 1584 aa14.52□□□□□ -0.08
CAST-240ENST00000514055 ATP10AO60312 1499 aa14.52□□□□□ -0.08
CAST-240ENST00000514055 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.08
CAST-240ENST00000514055 PTPRTO14522 1441 aa14.5□□□□□ -0.09
CAST-240ENST00000514055 C9orf84Q5VXU9 1444 aa14.5□□□□□ -0.09
CAST-240ENST00000514055 PLCH2O75038 1416 aa14.46□□□□□ -0.09
CAST-240ENST00000514055 EEA1Q15075 1411 aa14.45□□□□□ -0.1
CAST-240ENST00000514055 CDK13Q14004 1512 aaKnown RBP14.45□□□□□ -0.1
CAST-240ENST00000514055 SETD1BQ9UPS6 1966 aaKnown RBP14.44□□□□□ -0.1
CAST-240ENST00000514055 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
CAST-240ENST00000514055 NCOA1Q15788 1441 aa14.42□□□□□ -0.1
CAST-240ENST00000514055 UBAP1LF5GYI3 381 aa14.42□□□□□ -0.1
CAST-240ENST00000514055 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
CAST-240ENST00000514055 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
CAST-240ENST00000514055 C3P01024 1663 aa14.41□□□□□ -0.1
CAST-240ENST00000514055 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
CAST-240ENST00000514055 EFCAB2Q5VUJ9 269 aa14.4□□□□□ -0.1
CAST-240ENST00000514055 MYT1LQ9UL68 1186 aa14.4□□□□□ -0.1
CAST-240ENST00000514055 NCKAP5LQ9HCH0 1330 aa14.39□□□□□ -0.11
CAST-240ENST00000514055 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
CAST-240ENST00000514055 TRAPPC8Q9Y2L5 1435 aa14.38□□□□□ -0.11
CAST-240ENST00000514055 ZNF518AQ6AHZ1 1483 aa14.36□□□□□ -0.11
CAST-240ENST00000514055 KDM5CP41229 1560 aa14.35□□□□□ -0.11
CAST-240ENST00000514055 CAMSAP1Q5T5Y3 1602 aa14.35□□□□□ -0.11
CAST-240ENST00000514055 ABCA6Q8N139 1617 aa14.34□□□□□ -0.11
CAST-240ENST00000514055 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
CAST-240ENST00000514055 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
CAST-240ENST00000514055 KIF14Q15058 1648 aa14.33□□□□□ -0.11
CAST-240ENST00000514055 MYO5CQ9NQX4 1742 aa14.33□□□□□ -0.12
CAST-240ENST00000514055 HSPA1LP34931 641 aa14.33□□□□□ -0.12
CAST-240ENST00000514055 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
CAST-240ENST00000514055 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
CAST-240ENST00000514055 REREQ9P2R6 1566 aa14.31□□□□□ -0.12
CAST-240ENST00000514055 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
CAST-240ENST00000514055 MLH3Q9UHC1 1453 aa14.29□□□□□ -0.12
CAST-240ENST00000514055 AGLP35573 1532 aa14.29□□□□□ -0.12
CAST-240ENST00000514055 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
CAST-240ENST00000514055 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
CAST-240ENST00000514055 ZMYM3Q14202 1370 aa14.25□□□□□ -0.13
CAST-240ENST00000514055 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
CAST-240ENST00000514055 NPATQ14207 1427 aa14.24□□□□□ -0.13
CAST-240ENST00000514055 PKD2Q13563 968 aa14.23□□□□□ -0.13
CAST-240ENST00000514055 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
CAST-240ENST00000514055 CDK11AQ9UQ88 783 aaPredicted RBP14.23□□□□□ -0.13
CAST-240ENST00000514055 CDC42BPBQ9Y5S2 1711 aa14.23□□□□□ -0.13
CAST-240ENST00000514055 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
CAST-240ENST00000514055 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
CAST-240ENST00000514055 ABCC1P33527 1531 aa14.22□□□□□ -0.13
CAST-240ENST00000514055 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
CAST-240ENST00000514055 PLA2R1Q13018 1463 aa14.21□□□□□ -0.13
CAST-240ENST00000514055 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
CAST-240ENST00000514055 SENP3Q9H4L4 574 aaPredicted RBP14.2□□□□□ -0.14
CAST-240ENST00000514055 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
CAST-240ENST00000514055 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
CAST-240ENST00000514055 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
CAST-240ENST00000514055 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
CAST-240ENST00000514055 MROH2AA6NES4 1674 aa14.18□□□□□ -0.14
CAST-240ENST00000514055 ZNF142P52746 1687 aaPredicted RBP14.17□□□□□ -0.14
CAST-240ENST00000514055 CLIP1P30622 1438 aa14.17□□□□□ -0.14
CAST-240ENST00000514055 FMN1Q68DA7 1419 aa14.17□□□□□ -0.14
CAST-240ENST00000514055 TOM1O60784 492 aa14.17□□□□□ -0.14
CAST-240ENST00000514055 ARHGAP35Q9NRY4 1499 aa14.17□□□□□ -0.14
CAST-240ENST00000514055 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
CAST-240ENST00000514055 LRRIQ1Q96JM4 1722 aa14.16□□□□□ -0.14
CAST-240ENST00000514055 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
CAST-240ENST00000514055 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
CAST-240ENST00000514055 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
CAST-240ENST00000514055 ALKQ9UM73 1620 aa14.15□□□□□ -0.14
CAST-240ENST00000514055 UBTFP17480 764 aaKnown RBP14.14□□□□□ -0.15
CAST-240ENST00000514055 GGT6Q6P531 493 aa14.14□□□□□ -0.15
CAST-240ENST00000514055 ZNF777Q9ULD5 760 aaPredicted RBP14.14□□□□□ -0.15
CAST-240ENST00000514055 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
CAST-240ENST00000514055 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
CAST-240ENST00000514055 HNRNPMP52272 730 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAST-240ENST00000514055 RGS17Q9UGC6 210 aaPredicted RBP14.12□□□□□ -0.15
CAST-240ENST00000514055 NEURL4Q96JN8 1562 aa14.11□□□□□ -0.15
CAST-240ENST00000514055 DNMT1P26358 1616 aaKnown RBP14.11□□□□□ -0.15
CAST-240ENST00000514055 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
CAST-240ENST00000514055 CPS1P31327 1500 aa14.1□□□□□ -0.15
CAST-240ENST00000514055 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
CAST-240ENST00000514055 CDC42BPAQ5VT25 1732 aa14.09□□□□□ -0.15
CAST-240ENST00000514055 PLXNC1O60486 1568 aa14.09□□□□□ -0.15
CAST-240ENST00000514055 A2MP01023 1474 aa14.08□□□□□ -0.16
CAST-240ENST00000514055 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.16
CAST-240ENST00000514055 ATP7AQ04656 1500 aa14.07□□□□□ -0.16
CAST-240ENST00000514055 VWDEQ8N2E2 1590 aa14.07□□□□□ -0.16
CAST-240ENST00000514055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAST-240ENST00000514055 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
CAST-240ENST00000514055 GPATCH8Q9UKJ3 1502 aaKnown RBP14.04□□□□□ -0.16
CAST-240ENST00000514055 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
CAST-240ENST00000514055 TNRQ92752 1358 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms