RNA–Protein interactions for RNA: ENST00000513471.5

C1QTNF3-206, Transcript of C1q and TNF related 3, humanhuman

TSL 1 (best)

Gene C1QTNF3, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-206ENST00000513471 ST18O60284 1047 aa13.7□□□□□ -0.22
C1QTNF3-206ENST00000513471 NBR1Q14596 966 aa13.69□□□□□ -0.22
C1QTNF3-206ENST00000513471 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
C1QTNF3-206ENST00000513471 SOGA1O94964 1423 aa13.66□□□□□ -0.22
C1QTNF3-206ENST00000513471 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
C1QTNF3-206ENST00000513471 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
C1QTNF3-206ENST00000513471 NUBP1P53384 320 aa13.65□□□□□ -0.22
C1QTNF3-206ENST00000513471 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
C1QTNF3-206ENST00000513471 RIOK3O14730 519 aaKnown RBP13.64□□□□□ -0.23
C1QTNF3-206ENST00000513471 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
C1QTNF3-206ENST00000513471 ERCC6Q03468 1493 aa13.63□□□□□ -0.23
C1QTNF3-206ENST00000513471 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
C1QTNF3-206ENST00000513471 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
C1QTNF3-206ENST00000513471 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
C1QTNF3-206ENST00000513471 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
C1QTNF3-206ENST00000513471 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
C1QTNF3-206ENST00000513471 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
C1QTNF3-206ENST00000513471 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
C1QTNF3-206ENST00000513471 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
C1QTNF3-206ENST00000513471 TIE1P35590 1138 aa13.59□□□□□ -0.23
C1QTNF3-206ENST00000513471 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
C1QTNF3-206ENST00000513471 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
C1QTNF3-206ENST00000513471 SEC24BO95487 1268 aa13.58□□□□□ -0.24
C1QTNF3-206ENST00000513471 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
C1QTNF3-206ENST00000513471 CUX2O14529 1486 aa13.56□□□□□ -0.24
C1QTNF3-206ENST00000513471 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
C1QTNF3-206ENST00000513471 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
C1QTNF3-206ENST00000513471 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
C1QTNF3-206ENST00000513471 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
C1QTNF3-206ENST00000513471 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
C1QTNF3-206ENST00000513471 STK25O00506 426 aa13.54□□□□□ -0.24
C1QTNF3-206ENST00000513471 KIF21BO75037 1637 aa13.53□□□□□ -0.24
C1QTNF3-206ENST00000513471 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
C1QTNF3-206ENST00000513471 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
C1QTNF3-206ENST00000513471 WDR62O43379 1518 aa13.52□□□□□ -0.25
C1QTNF3-206ENST00000513471 RYDENQ9NUL5 291 aaKnown RBP13.5□□□□□ -0.25
C1QTNF3-206ENST00000513471 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
C1QTNF3-206ENST00000513471 TNIKQ9UKE5 1360 aa13.49□□□□□ -0.25
C1QTNF3-206ENST00000513471 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
C1QTNF3-206ENST00000513471 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
C1QTNF3-206ENST00000513471 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
C1QTNF3-206ENST00000513471 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
C1QTNF3-206ENST00000513471 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
C1QTNF3-206ENST00000513471 MAP3K13O43283 966 aa13.46□□□□□ -0.25
C1QTNF3-206ENST00000513471 IER5LQ5T953 404 aa13.46□□□□□ -0.25
C1QTNF3-206ENST00000513471 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
C1QTNF3-206ENST00000513471 PRXQ9BXM0 1461 aa13.46□□□□□ -0.26
C1QTNF3-206ENST00000513471 IGF1RP08069 1367 aa13.45□□□□□ -0.26
C1QTNF3-206ENST00000513471 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
C1QTNF3-206ENST00000513471 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
C1QTNF3-206ENST00000513471 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
C1QTNF3-206ENST00000513471 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
C1QTNF3-206ENST00000513471 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
C1QTNF3-206ENST00000513471 CUL7Q14999 1698 aa13.41□□□□□ -0.26
C1QTNF3-206ENST00000513471 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
C1QTNF3-206ENST00000513471 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
C1QTNF3-206ENST00000513471 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
C1QTNF3-206ENST00000513471 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
C1QTNF3-206ENST00000513471 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
C1QTNF3-206ENST00000513471 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
C1QTNF3-206ENST00000513471 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
C1QTNF3-206ENST00000513471 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
C1QTNF3-206ENST00000513471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
C1QTNF3-206ENST00000513471 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
C1QTNF3-206ENST00000513471 CEP162Q5TB80 1403 aa13.37□□□□□ -0.27
C1QTNF3-206ENST00000513471 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
C1QTNF3-206ENST00000513471 MARVELD3Q96A59 401 aa13.33□□□□□ -0.27
C1QTNF3-206ENST00000513471 PYGBP11216 843 aa13.32□□□□□ -0.28
C1QTNF3-206ENST00000513471 CLIP1P30622 1438 aa13.32□□□□□ -0.28
C1QTNF3-206ENST00000513471 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
C1QTNF3-206ENST00000513471 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
C1QTNF3-206ENST00000513471 AQRO60306 1485 aaKnown RBP eCLIP13.31□□□□□ -0.28
C1QTNF3-206ENST00000513471 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
C1QTNF3-206ENST00000513471 SNPHO15079 494 aa13.29□□□□□ -0.28
C1QTNF3-206ENST00000513471 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
C1QTNF3-206ENST00000513471 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
C1QTNF3-206ENST00000513471 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
C1QTNF3-206ENST00000513471 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
C1QTNF3-206ENST00000513471 KRTAP3-3Q9BYR6 98 aa13.24□□□□□ -0.29
C1QTNF3-206ENST00000513471 KRTAP3-2Q9BYR7 98 aa13.24□□□□□ -0.29
C1QTNF3-206ENST00000513471 PLCG2P16885 1265 aa13.23□□□□□ -0.29
C1QTNF3-206ENST00000513471 ZNF467Q7Z7K2 595 aaPredicted RBP13.23□□□□□ -0.29
C1QTNF3-206ENST00000513471 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
C1QTNF3-206ENST00000513471 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.29
C1QTNF3-206ENST00000513471 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.3
C1QTNF3-206ENST00000513471 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
C1QTNF3-206ENST00000513471 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
C1QTNF3-206ENST00000513471 VPS8Q8N3P4 1428 aa13.19□□□□□ -0.3
C1QTNF3-206ENST00000513471 SYNJ2O15056 1496 aa13.19□□□□□ -0.3
C1QTNF3-206ENST00000513471 EFCAB5A4FU69 1503 aa13.18□□□□□ -0.3
C1QTNF3-206ENST00000513471 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
C1QTNF3-206ENST00000513471 PCDHB13Q9Y5F0 798 aa13.17□□□□□ -0.3
C1QTNF3-206ENST00000513471 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
C1QTNF3-206ENST00000513471 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
C1QTNF3-206ENST00000513471 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
C1QTNF3-206ENST00000513471 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
C1QTNF3-206ENST00000513471 EMP3P54852 163 aa13.14□□□□□ -0.31
C1QTNF3-206ENST00000513471 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
C1QTNF3-206ENST00000513471 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
C1QTNF3-206ENST00000513471 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms