RNA–Protein interactions for RNA: ENST00000513471.5

C1QTNF3-206, Transcript of C1q and TNF related 3, humanhuman

TSL 1 (best)

Gene C1QTNF3, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-206ENST00000513471 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
C1QTNF3-206ENST00000513471 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
C1QTNF3-206ENST00000513471 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
C1QTNF3-206ENST00000513471 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
C1QTNF3-206ENST00000513471 POTEDQ86YR6 584 aa23.8■■□□□ 1.4
C1QTNF3-206ENST00000513471 FOXD1Q16676 465 aa23.67■■□□□ 1.38
C1QTNF3-206ENST00000513471 MSH5O43196 834 aa22.53■■□□□ 1.2
C1QTNF3-206ENST00000513471 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
C1QTNF3-206ENST00000513471 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
C1QTNF3-206ENST00000513471 ADRA2BP18089 450 aa21.19■□□□□ 0.98
C1QTNF3-206ENST00000513471 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
C1QTNF3-206ENST00000513471 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.79
C1QTNF3-206ENST00000513471 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
C1QTNF3-206ENST00000513471 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
C1QTNF3-206ENST00000513471 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
C1QTNF3-206ENST00000513471 RNF39Q9H2S5 420 aa19.16■□□□□ 0.66
C1QTNF3-206ENST00000513471 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
C1QTNF3-206ENST00000513471 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
C1QTNF3-206ENST00000513471 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
C1QTNF3-206ENST00000513471 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
C1QTNF3-206ENST00000513471 POTEHQ6S545 545 aa18.42■□□□□ 0.54
C1QTNF3-206ENST00000513471 KCNA4P22459 653 aa18.36■□□□□ 0.53
C1QTNF3-206ENST00000513471 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
C1QTNF3-206ENST00000513471 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
C1QTNF3-206ENST00000513471 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
C1QTNF3-206ENST00000513471 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
C1QTNF3-206ENST00000513471 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
C1QTNF3-206ENST00000513471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
C1QTNF3-206ENST00000513471 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
C1QTNF3-206ENST00000513471 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
C1QTNF3-206ENST00000513471 DSG3P32926 999 aa17.58■□□□□ 0.4
C1QTNF3-206ENST00000513471 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
C1QTNF3-206ENST00000513471 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
C1QTNF3-206ENST00000513471 CAPN15O75808 1086 aa17.38■□□□□ 0.37
C1QTNF3-206ENST00000513471 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
C1QTNF3-206ENST00000513471 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
C1QTNF3-206ENST00000513471 ABCB7O75027 752 aa16.89■□□□□ 0.3
C1QTNF3-206ENST00000513471 ZBTB22O15209 634 aa16.88■□□□□ 0.29
C1QTNF3-206ENST00000513471 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
C1QTNF3-206ENST00000513471 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
C1QTNF3-206ENST00000513471 SP7Q8TDD2 431 aaPredicted RBP16.78■□□□□ 0.28
C1QTNF3-206ENST00000513471 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
C1QTNF3-206ENST00000513471 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.27
C1QTNF3-206ENST00000513471 FOXD4L1Q9NU39 408 aa16.73■□□□□ 0.27
C1QTNF3-206ENST00000513471 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
C1QTNF3-206ENST00000513471 APLP2Q06481 763 aa16.69■□□□□ 0.26
C1QTNF3-206ENST00000513471 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
C1QTNF3-206ENST00000513471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
C1QTNF3-206ENST00000513471 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
C1QTNF3-206ENST00000513471 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
C1QTNF3-206ENST00000513471 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
C1QTNF3-206ENST00000513471 POLA2Q14181 598 aa16.18■□□□□ 0.18
C1QTNF3-206ENST00000513471 HAX1O00165 279 aa16.17■□□□□ 0.18
C1QTNF3-206ENST00000513471 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
C1QTNF3-206ENST00000513471 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
C1QTNF3-206ENST00000513471 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
C1QTNF3-206ENST00000513471 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
C1QTNF3-206ENST00000513471 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
C1QTNF3-206ENST00000513471 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
C1QTNF3-206ENST00000513471 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
C1QTNF3-206ENST00000513471 EVX2Q03828 476 aa15.95■□□□□ 0.14
C1QTNF3-206ENST00000513471 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
C1QTNF3-206ENST00000513471 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
C1QTNF3-206ENST00000513471 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
C1QTNF3-206ENST00000513471 FKBP8Q14318 412 aa15.83■□□□□ 0.12
C1QTNF3-206ENST00000513471 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
C1QTNF3-206ENST00000513471 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
C1QTNF3-206ENST00000513471 ABCC9O60706 1549 aa15.77■□□□□ 0.11
C1QTNF3-206ENST00000513471 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
C1QTNF3-206ENST00000513471 LHX8Q68G74 356 aa15.73■□□□□ 0.11
C1QTNF3-206ENST00000513471 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
C1QTNF3-206ENST00000513471 MYO15BQ96JP2 1530 aa15.69■□□□□ 0.1
C1QTNF3-206ENST00000513471 NACADO15069 1562 aa15.61■□□□□ 0.09
C1QTNF3-206ENST00000513471 PLSCR2Q9NRY7 297 aa15.55■□□□□ 0.08
C1QTNF3-206ENST00000513471 GABBR2O75899 941 aa15.51■□□□□ 0.07
C1QTNF3-206ENST00000513471 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
C1QTNF3-206ENST00000513471 C19orf67A6NJJ6 358 aa15.49■□□□□ 0.07
C1QTNF3-206ENST00000513471 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
C1QTNF3-206ENST00000513471 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
C1QTNF3-206ENST00000513471 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
C1QTNF3-206ENST00000513471 SCRIBQ14160 1630 aa15.27■□□□□ 0.04
C1QTNF3-206ENST00000513471 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.02
C1QTNF3-206ENST00000513471 POTEIP0CG38 1075 aa15.21■□□□□ 0.02
C1QTNF3-206ENST00000513471 SPDYE6P0CI01 402 aa15.21■□□□□ 0.02
C1QTNF3-206ENST00000513471 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.02
C1QTNF3-206ENST00000513471 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
C1QTNF3-206ENST00000513471 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
C1QTNF3-206ENST00000513471 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
C1QTNF3-206ENST00000513471 CHADLQ6NUI6 762 aa15.03■□□□□ -0
C1QTNF3-206ENST00000513471 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
C1QTNF3-206ENST00000513471 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
C1QTNF3-206ENST00000513471 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
C1QTNF3-206ENST00000513471 FBLN2P98095 1184 aa14.91□□□□□ -0.02
C1QTNF3-206ENST00000513471 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
C1QTNF3-206ENST00000513471 CLCN6P51797 869 aa14.9□□□□□ -0.02
C1QTNF3-206ENST00000513471 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
C1QTNF3-206ENST00000513471 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
C1QTNF3-206ENST00000513471 POTEMA6NI47 508 aa14.85□□□□□ -0.03
C1QTNF3-206ENST00000513471 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
C1QTNF3-206ENST00000513471 PROM2Q8N271 834 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms