RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 RGL2O15211 777 aa7.23□□□□□ -1.25
MATR3-219ENST00000512040 ARAP1Q96P48 1450 aa7.23□□□□□ -1.25
MATR3-219ENST00000512040 TOPBP1Q92547 1522 aa7.22□□□□□ -1.25
MATR3-219ENST00000512040 TMEM121BQ9BXQ6 578 aaPredicted RBP7.21□□□□□ -1.26
MATR3-219ENST00000512040 CCDC88BA6NC98 1476 aa7.19□□□□□ -1.26
MATR3-219ENST00000512040 IFT140Q96RY7 1462 aa7.19□□□□□ -1.26
MATR3-219ENST00000512040 PYGBP11216 843 aa7.19□□□□□ -1.26
MATR3-219ENST00000512040 DNMBPQ6XZF7 1577 aa7.18□□□□□ -1.26
MATR3-219ENST00000512040 PODXL2Q9NZ53 605 aa7.18□□□□□ -1.26
MATR3-219ENST00000512040 PAK3O75914 559 aaPredicted RBP7.17□□□□□ -1.26
MATR3-219ENST00000512040 CLASP1Q7Z460 1538 aa7.17□□□□□ -1.26
MATR3-219ENST00000512040 TPRNQ4KMQ1 711 aa7.16□□□□□ -1.26
MATR3-219ENST00000512040 RNF25Q96BH1 459 aaPredicted RBP7.16□□□□□ -1.26
MATR3-219ENST00000512040 PHF12Q96QT6 1004 aa7.15□□□□□ -1.26
MATR3-219ENST00000512040 GTF3C3Q9Y5Q9 886 aa7.15□□□□□ -1.26
MATR3-219ENST00000512040 AQRO60306 1485 aaKnown RBP eCLIP7.15□□□□□ -1.273e-13■□□□□ 8.9
MATR3-219ENST00000512040 POLA1P09884 1462 aaPredicted RBP7.15□□□□□ -1.27
MATR3-219ENST00000512040 WDR97A6NE52 1622 aa7.15□□□□□ -1.27
MATR3-219ENST00000512040 POTEFA5A3E0 1075 aa7.13□□□□□ -1.27
MATR3-219ENST00000512040 RIOK3O14730 519 aaKnown RBP7.13□□□□□ -1.27
MATR3-219ENST00000512040 CHRM1P11229 460 aaPredicted RBP7.13□□□□□ -1.27
MATR3-219ENST00000512040 PLCB2Q00722 1185 aa7.13□□□□□ -1.27
MATR3-219ENST00000512040 CCDC61Q9Y6R9 512 aa7.13□□□□□ -1.27
MATR3-219ENST00000512040 RAD54L2Q9Y4B4 1467 aa7.12□□□□□ -1.27
MATR3-219ENST00000512040 CHGAP10645 457 aaKnown RBP7.11□□□□□ -1.27
MATR3-219ENST00000512040 CYB5RLQ6IPT4 315 aa7.1□□□□□ -1.27
MATR3-219ENST00000512040 SNAPC4Q5SXM2 1469 aa7.1□□□□□ -1.27
MATR3-219ENST00000512040 PBRM1Q86U86 1689 aa7.09□□□□□ -1.27
MATR3-219ENST00000512040 ERCC6L2Q5T890 1561 aa7.09□□□□□ -1.27
MATR3-219ENST00000512040 CUX1P39880 1505 aa7.08□□□□□ -1.28
MATR3-219ENST00000512040 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
MATR3-219ENST00000512040 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
MATR3-219ENST00000512040 PCDHB8Q9UN66 801 aa7.08□□□□□ -1.28
MATR3-219ENST00000512040 PCDHB13Q9Y5F0 798 aa7.08□□□□□ -1.28
MATR3-219ENST00000512040 FGD5Q6ZNL6 1462 aa7.07□□□□□ -1.28
MATR3-219ENST00000512040 VGFO15240 615 aaPredicted RBP7.07□□□□□ -1.28
MATR3-219ENST00000512040 MAP3K13O43283 966 aa7.07□□□□□ -1.28
MATR3-219ENST00000512040 NPM2Q86SE8 214 aaKnown RBP7.07□□□□□ -1.28
MATR3-219ENST00000512040 SLAIN1Q8ND83 568 aa7.07□□□□□ -1.28
MATR3-219ENST00000512040 ZNF467Q7Z7K2 595 aaPredicted RBP7.06□□□□□ -1.28
MATR3-219ENST00000512040 KIF12Q96FN5 646 aa7.06□□□□□ -1.28
MATR3-219ENST00000512040 ABCC8Q09428 1581 aa7.06□□□□□ -1.28
MATR3-219ENST00000512040 ABCA5Q8WWZ7 1642 aa7.05□□□□□ -1.28
MATR3-219ENST00000512040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.05□□□□□ -1.28
MATR3-219ENST00000512040 STK25O00506 426 aa7.05□□□□□ -1.28
MATR3-219ENST00000512040 HS6ST3Q8IZP7 471 aa7.05□□□□□ -1.28
MATR3-219ENST00000512040 BBXQ8WY36 941 aaPredicted RBP7.05□□□□□ -1.28
MATR3-219ENST00000512040 ZFP91Q96JP5 570 aaPredicted RBP7.05□□□□□ -1.28
MATR3-219ENST00000512040 TDRD9Q8NDG6 1382 aaKnown RBP7.05□□□□□ -1.28
MATR3-219ENST00000512040 SYNJ1O43426 1573 aa7.04□□□□□ -1.28
MATR3-219ENST00000512040 ATN1P54259 1190 aaPredicted RBP7.04□□□□□ -1.28
MATR3-219ENST00000512040 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
MATR3-219ENST00000512040 MARVELD3Q96A59 401 aa7.03□□□□□ -1.28
MATR3-219ENST00000512040 MS4A3Q96HJ5 214 aa7.03□□□□□ -1.28
MATR3-219ENST00000512040 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.03□□□□□ -1.28
MATR3-219ENST00000512040 STK24Q9Y6E0 443 aa7.03□□□□□ -1.28
MATR3-219ENST00000512040 KIF13AQ9H1H9 1805 aa7.03□□□□□ -1.28
MATR3-219ENST00000512040 BCL11BQ9C0K0 894 aaPredicted RBP7.02□□□□□ -1.29
MATR3-219ENST00000512040 MAGI1Q96QZ7 1491 aaPredicted RBP7.02□□□□□ -1.29
MATR3-219ENST00000512040 SOGA1O94964 1423 aa7.01□□□□□ -1.29
MATR3-219ENST00000512040 CEP170Q5SW79 1584 aa7.01□□□□□ -1.29
MATR3-219ENST00000512040 PDAP1Q13442 181 aaKnown RBP7.01□□□□□ -1.29
MATR3-219ENST00000512040 TMEM132AQ24JP5 1023 aa7.01□□□□□ -1.29
MATR3-219ENST00000512040 RNF166Q96A37 237 aaPredicted RBP7.01□□□□□ -1.29
MATR3-219ENST00000512040 SGIP1Q9BQI5 828 aa7.01□□□□□ -1.29
MATR3-219ENST00000512040 SYNJ2O15056 1496 aa7□□□□□ -1.29
MATR3-219ENST00000512040 GAPVD1Q14C86 1478 aa7□□□□□ -1.29
MATR3-219ENST00000512040 PSEN1P49768 467 aa7□□□□□ -1.29
MATR3-219ENST00000512040 PAXIP1Q6ZW49 1069 aaPredicted RBP7□□□□□ -1.29
MATR3-219ENST00000512040 CFAP44Q96MT7 982 aa7□□□□□ -1.29
MATR3-219ENST00000512040 ADAMTS12P58397 1594 aa6.99□□□□□ -1.29
MATR3-219ENST00000512040 GRIN2BQ13224 1484 aa6.99□□□□□ -1.29
MATR3-219ENST00000512040 SHROOM2Q13796 1616 aa6.99□□□□□ -1.29
MATR3-219ENST00000512040 SNPHO15079 494 aa6.98□□□□□ -1.29
MATR3-219ENST00000512040 VSIG10Q8N0Z9 540 aa6.98□□□□□ -1.29
MATR3-219ENST00000512040 HAP1P54257 671 aaPredicted RBP6.96□□□□□ -1.3
MATR3-219ENST00000512040 NKX1-1Q15270 411 aaPredicted RBP6.96□□□□□ -1.3
MATR3-219ENST00000512040 TRPC6Q9Y210 931 aa6.96□□□□□ -1.3
MATR3-219ENST00000512040 ABCA10Q8WWZ4 1543 aa6.96□□□□□ -1.3
MATR3-219ENST00000512040 SPRYD3Q8NCJ5 442 aa6.95□□□□□ -1.3
MATR3-219ENST00000512040 GRIN2AQ12879 1464 aa6.95□□□□□ -1.3
MATR3-219ENST00000512040 BIVM-ERCC5R4GMW8 1640 aa6.94□□□□□ -1.3
MATR3-219ENST00000512040 SEC24BO95487 1268 aa6.94□□□□□ -1.3
MATR3-219ENST00000512040 NUP160Q12769 1436 aa6.93□□□□□ -1.3
MATR3-219ENST00000512040 C14orf37Q86TY3 774 aa6.93□□□□□ -1.3
MATR3-219ENST00000512040 TMEM106CQ9BVX2 250 aa6.93□□□□□ -1.3
MATR3-219ENST00000512040 CABP2Q9NPB3 220 aa6.93□□□□□ -1.3
MATR3-219ENST00000512040 COLQQ9Y215 455 aaPredicted RBP6.93□□□□□ -1.3
MATR3-219ENST00000512040 RUSC2Q8N2Y8 1516 aa6.92□□□□□ -1.3
MATR3-219ENST00000512040 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
MATR3-219ENST00000512040 HS3ST6Q96QI5 342 aa6.91□□□□□ -1.3
MATR3-219ENST00000512040 DIP2BQ9P265 1576 aa6.91□□□□□ -1.3
MATR3-219ENST00000512040 GTPBP6O43824 516 aaPredicted RBP6.9□□□□□ -1.3
MATR3-219ENST00000512040 EMP3P54852 163 aa6.9□□□□□ -1.3
MATR3-219ENST00000512040 EFCAB3Q8N7B9 438 aa6.9□□□□□ -1.3
MATR3-219ENST00000512040 BCL11AQ9H165 835 aa6.9□□□□□ -1.3
MATR3-219ENST00000512040 TOP2BQ02880 1626 aa6.9□□□□□ -1.31
MATR3-219ENST00000512040 ADCY10Q96PN6 1610 aa6.9□□□□□ -1.31
MATR3-219ENST00000512040 POTEB3A0JP26 581 aa6.89□□□□□ -1.31
MATR3-219ENST00000512040 GOLGA2Q08379 1002 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms