RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
MATR3-219ENST00000512040 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
MATR3-219ENST00000512040 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
MATR3-219ENST00000512040 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
MATR3-219ENST00000512040 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
MATR3-219ENST00000512040 FOXD1Q16676 465 aa12.6□□□□□ -0.39
MATR3-219ENST00000512040 MSH5O43196 834 aa12.36□□□□□ -0.43
MATR3-219ENST00000512040 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
MATR3-219ENST00000512040 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
MATR3-219ENST00000512040 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
MATR3-219ENST00000512040 POTEHQ6S545 545 aa10.84□□□□□ -0.67
MATR3-219ENST00000512040 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
MATR3-219ENST00000512040 ADRA2BP18089 450 aa10.67□□□□□ -0.7
MATR3-219ENST00000512040 DMRT2Q9Y5R5 561 aa10.43□□□□□ -0.74
MATR3-219ENST00000512040 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
MATR3-219ENST00000512040 C1QBPQ07021 282 aaKnown RBP10.21□□□□□ -0.77
MATR3-219ENST00000512040 MAPK8IP2Q13387 824 aaPredicted RBP10.17□□□□□ -0.78
MATR3-219ENST00000512040 DCAF8L1A6NGE4 600 aa9.99□□□□□ -0.81
MATR3-219ENST00000512040 SCAF1Q9H7N4 1312 aaKnown RBP9.87□□□□□ -0.83
MATR3-219ENST00000512040 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
MATR3-219ENST00000512040 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
MATR3-219ENST00000512040 KCNA4P22459 653 aa9.69□□□□□ -0.86
MATR3-219ENST00000512040 SP7Q8TDD2 431 aaPredicted RBP9.58□□□□□ -0.88
MATR3-219ENST00000512040 HOXD11P31277 338 aaPredicted RBP9.57□□□□□ -0.88
MATR3-219ENST00000512040 DNAJC5BQ9UF47 199 aa9.57□□□□□ -0.88
MATR3-219ENST00000512040 NCBP3Q53F19 620 aaKnown RBP9.53□□□□□ -0.88
MATR3-219ENST00000512040 CNKSR2Q8WXI2 1034 aa9.45□□□□□ -0.9
MATR3-219ENST00000512040 PLSCR2Q9NRY7 297 aa9.42□□□□□ -0.9
MATR3-219ENST00000512040 NPM3O75607 178 aaKnown RBP9.4□□□□□ -0.9
MATR3-219ENST00000512040 DSG3P32926 999 aa9.29□□□□□ -0.92
MATR3-219ENST00000512040 SLC4A1APQ9BWU0 796 aaKnown RBP9.25□□□□□ -0.93
MATR3-219ENST00000512040 RNF216Q9NWF9 866 aaPredicted RBP9.22□□□□□ -0.93
MATR3-219ENST00000512040 CHRDL2Q6WN34 429 aa9.21□□□□□ -0.94
MATR3-219ENST00000512040 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
MATR3-219ENST00000512040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.08□□□□□ -0.964e-7■■■■□ 22.6
MATR3-219ENST00000512040 CAPN15O75808 1086 aa9.02□□□□□ -0.97
MATR3-219ENST00000512040 LHX8Q68G74 356 aa8.96□□□□□ -0.98
MATR3-219ENST00000512040 RBM42Q9BTD8 480 aaKnown RBP8.95□□□□□ -0.98
MATR3-219ENST00000512040 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
MATR3-219ENST00000512040 CSRNP3Q8WYN3 585 aa8.94□□□□□ -0.98
MATR3-219ENST00000512040 ABCC9O60706 1549 aa8.94□□□□□ -0.98
MATR3-219ENST00000512040 ZBTB22O15209 634 aa8.92□□□□□ -0.98
MATR3-219ENST00000512040 HAX1O00165 279 aa8.89□□□□□ -0.99
MATR3-219ENST00000512040 SLC24A1O60721 1099 aa8.88□□□□□ -0.99
MATR3-219ENST00000512040 FOXD4L1Q9NU39 408 aa8.86□□□□□ -0.99
MATR3-219ENST00000512040 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
MATR3-219ENST00000512040 CCDC180Q9P1Z9 1646 aa8.83□□□□□ -1
MATR3-219ENST00000512040 U3KPZ7 1027 aaPredicted RBP8.73□□□□□ -1.01
MATR3-219ENST00000512040 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
MATR3-219ENST00000512040 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
MATR3-219ENST00000512040 ABCB7O75027 752 aa8.66□□□□□ -1.02
MATR3-219ENST00000512040 EVX2Q03828 476 aa8.65□□□□□ -1.02
MATR3-219ENST00000512040 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
MATR3-219ENST00000512040 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
MATR3-219ENST00000512040 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
MATR3-219ENST00000512040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.52□□□□□ -1.05
MATR3-219ENST00000512040 HNRNPUL2Q1KMD3 747 aaKnown RBP8.52□□□□□ -1.05
MATR3-219ENST00000512040 ATXN8OSP0DMR3 200 aa8.51□□□□□ -1.05
MATR3-219ENST00000512040 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
MATR3-219ENST00000512040 POTEMA6NI47 508 aa8.5□□□□□ -1.05
MATR3-219ENST00000512040 FXR2P51116 673 aaKnown RBP eCLIP8.48□□□□□ -1.052e-13■□□□□ 9.9
MATR3-219ENST00000512040 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
MATR3-219ENST00000512040 AKT1S1Q96B36 256 aa8.46□□□□□ -1.06
MATR3-219ENST00000512040 APLP2Q06481 763 aa8.45□□□□□ -1.06
MATR3-219ENST00000512040 GABBR2O75899 941 aa8.42□□□□□ -1.06
MATR3-219ENST00000512040 POTEGQ6S5H5 508 aa8.42□□□□□ -1.06
MATR3-219ENST00000512040 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
MATR3-219ENST00000512040 RB1CC1Q8TDY2 1594 aa8.4□□□□□ -1.06
MATR3-219ENST00000512040 REM2Q8IYK8 340 aaPredicted RBP8.35□□□□□ -1.07
MATR3-219ENST00000512040 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
MATR3-219ENST00000512040 NACADO15069 1562 aa8.3□□□□□ -1.08
MATR3-219ENST00000512040 C19orf67A6NJJ6 358 aa8.25□□□□□ -1.09
MATR3-219ENST00000512040 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
MATR3-219ENST00000512040 PABPN1Q86U42 306 aaKnown RBP eCLIP8.23□□□□□ -1.09
MATR3-219ENST00000512040 DAXXQ9UER7 740 aaPredicted RBP8.22□□□□□ -1.09
MATR3-219ENST00000512040 TTBK1Q5TCY1 1321 aaPredicted RBP8.22□□□□□ -1.09
MATR3-219ENST00000512040 POTEIP0CG38 1075 aa8.21□□□□□ -1.1
MATR3-219ENST00000512040 POLA2Q14181 598 aa8.2□□□□□ -1.1
MATR3-219ENST00000512040 MYT1Q01538 1121 aa8.19□□□□□ -1.1
MATR3-219ENST00000512040 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
MATR3-219ENST00000512040 MYO15BQ96JP2 1530 aa8.13□□□□□ -1.11
MATR3-219ENST00000512040 FKBP8Q14318 412 aa8.11□□□□□ -1.11
MATR3-219ENST00000512040 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
MATR3-219ENST00000512040 FBLN2P98095 1184 aa8.09□□□□□ -1.11
MATR3-219ENST00000512040 MKRN4PQ13434 485 aaPredicted RBP8.08□□□□□ -1.12
MATR3-219ENST00000512040 DCAF8L2P0C7V8 631 aa8.06□□□□□ -1.12
MATR3-219ENST00000512040 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
MATR3-219ENST00000512040 SCRIBQ14160 1630 aa8.05□□□□□ -1.12
MATR3-219ENST00000512040 EIF4G1Q04637 1599 aaKnown RBP8.05□□□□□ -1.12
MATR3-219ENST00000512040 ZBTB12Q9Y330 459 aaPredicted RBP8.04□□□□□ -1.12
MATR3-219ENST00000512040 CECR2Q9BXF3 1484 aa8.03□□□□□ -1.12
MATR3-219ENST00000512040 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
MATR3-219ENST00000512040 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
MATR3-219ENST00000512040 DCAF1Q9Y4B6 1507 aa7.99□□□□□ -1.13
MATR3-219ENST00000512040 PELP1Q8IZL8 1130 aaKnown RBP7.99□□□□□ -1.13
MATR3-219ENST00000512040 CLCN6P51797 869 aa7.98□□□□□ -1.13
MATR3-219ENST00000512040 SPDYE4A6NLX3 237 aa7.97□□□□□ -1.13
MATR3-219ENST00000512040 DCBLD2Q96PD2 775 aa7.94□□□□□ -1.14
MATR3-219ENST00000512040 OSCARQ8IYS5 282 aa7.93□□□□□ -1.14
MATR3-219ENST00000512040 POTEB2H3BUK9 544 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms