RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 POLA1P09884 1462 aaPredicted RBP6.98□□□□□ -1.29
USP46-205ENST00000504078 RAD54L2Q9Y4B4 1467 aa6.98□□□□□ -1.29
USP46-205ENST00000504078 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.3
USP46-205ENST00000504078 TMEM106CQ9BVX2 250 aa6.96□□□□□ -1.3
USP46-205ENST00000504078 OCEL1Q9H607 264 aa6.95□□□□□ -1.3
USP46-205ENST00000504078 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.95□□□□□ -1.3
USP46-205ENST00000504078 IFNL1Q8IU54 200 aa6.94□□□□□ -1.3
USP46-205ENST00000504078 SYNJ1O43426 1573 aa6.94□□□□□ -1.3
USP46-205ENST00000504078 TDRD9Q8NDG6 1382 aaKnown RBP6.94□□□□□ -1.3
USP46-205ENST00000504078 MARVELD3Q96A59 401 aa6.93□□□□□ -1.3
USP46-205ENST00000504078 ZBTB47Q9UFB7 747 aaPredicted RBP6.93□□□□□ -1.3
USP46-205ENST00000504078 PBRM1Q86U86 1689 aa6.93□□□□□ -1.3
USP46-205ENST00000504078 FGD5Q6ZNL6 1462 aa6.92□□□□□ -1.3
USP46-205ENST00000504078 ERCC6L2Q5T890 1561 aa6.92□□□□□ -1.3
USP46-205ENST00000504078 WDR97A6NE52 1622 aa6.91□□□□□ -1.3
USP46-205ENST00000504078 ABCC8Q09428 1581 aa6.91□□□□□ -1.3
USP46-205ENST00000504078 GAPVD1Q14C86 1478 aa6.9□□□□□ -1.31
USP46-205ENST00000504078 CUX1P39880 1505 aa6.89□□□□□ -1.31
USP46-205ENST00000504078 MAGI1Q96QZ7 1491 aaPredicted RBP6.88□□□□□ -1.31
USP46-205ENST00000504078 SOGA1O94964 1423 aa6.88□□□□□ -1.31
USP46-205ENST00000504078 NUBP1P53384 320 aa6.88□□□□□ -1.31
USP46-205ENST00000504078 EMP3P54852 163 aa6.88□□□□□ -1.31
USP46-205ENST00000504078 PLCD3Q8N3E9 789 aa6.88□□□□□ -1.31
USP46-205ENST00000504078 FAM212AQ96EL1 285 aa6.87□□□□□ -1.31
USP46-205ENST00000504078 SYNJ2O15056 1496 aa6.86□□□□□ -1.31
USP46-205ENST00000504078 GRIN2BQ13224 1484 aa6.86□□□□□ -1.31
USP46-205ENST00000504078 CHMP7Q8WUX9 453 aaPredicted RBP6.86□□□□□ -1.31
USP46-205ENST00000504078 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
USP46-205ENST00000504078 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
USP46-205ENST00000504078 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
USP46-205ENST00000504078 ABCA5Q8WWZ7 1642 aa6.85□□□□□ -1.31
USP46-205ENST00000504078 CEP170Q5SW79 1584 aa6.84□□□□□ -1.31
USP46-205ENST00000504078 L3MBTL3Q96JM7 780 aaPredicted RBP6.84□□□□□ -1.31
USP46-205ENST00000504078 KIF13AQ9H1H9 1805 aa6.84□□□□□ -1.31
USP46-205ENST00000504078 ADAMTS12P58397 1594 aa6.83□□□□□ -1.32
USP46-205ENST00000504078 FAM205CA6NFA0 338 aa6.82□□□□□ -1.32
USP46-205ENST00000504078 C3orf67Q6ZVT6 689 aa6.82□□□□□ -1.32
USP46-205ENST00000504078 POTEB3A0JP26 581 aa6.81□□□□□ -1.32
USP46-205ENST00000504078 POTEBQ6S5H4 581 aa6.81□□□□□ -1.32
USP46-205ENST00000504078 GRIN2AQ12879 1464 aa6.8□□□□□ -1.32
USP46-205ENST00000504078 PDCD7Q8N8D1 485 aaKnown RBP6.78□□□□□ -1.32
USP46-205ENST00000504078 SHROOM2Q13796 1616 aa6.78□□□□□ -1.32
USP46-205ENST00000504078 ABCA10Q8WWZ4 1543 aa6.77□□□□□ -1.33
USP46-205ENST00000504078 KDM6BO15054 1643 aa6.76□□□□□ -1.33
USP46-205ENST00000504078 DIP2BQ9P265 1576 aa6.76□□□□□ -1.33
USP46-205ENST00000504078 RUSC2Q8N2Y8 1516 aa6.76□□□□□ -1.33
USP46-205ENST00000504078 NUP160Q12769 1436 aa6.76□□□□□ -1.33
USP46-205ENST00000504078 TSPOAP1O95153 1857 aa6.75□□□□□ -1.33
USP46-205ENST00000504078 MKRN3Q13064 507 aaKnown RBP6.75□□□□□ -1.33
USP46-205ENST00000504078 DCAF8Q5TAQ9 597 aa6.75□□□□□ -1.33
USP46-205ENST00000504078 PYGBP11216 843 aa6.74□□□□□ -1.33
USP46-205ENST00000504078 GOLGA2Q08379 1002 aa6.74□□□□□ -1.33
USP46-205ENST00000504078 ILDR1Q86SU0 546 aaPredicted RBP6.74□□□□□ -1.33
USP46-205ENST00000504078 ADCY10Q96PN6 1610 aa6.74□□□□□ -1.33
USP46-205ENST00000504078 RNF166Q96A37 237 aaPredicted RBP6.73□□□□□ -1.33
USP46-205ENST00000504078 PCDHB8Q9UN66 801 aa6.73□□□□□ -1.33
USP46-205ENST00000504078 PRG4Q92954 1404 aaPredicted RBP6.73□□□□□ -1.33
USP46-205ENST00000504078 BIVM-ERCC5R4GMW8 1640 aa6.71□□□□□ -1.34
USP46-205ENST00000504078 ABCC10Q5T3U5 1492 aa6.71□□□□□ -1.34
USP46-205ENST00000504078 FHAD1B1AJZ9 1412 aa6.7□□□□□ -1.34
USP46-205ENST00000504078 KDM4FA0A1W2PPD8 638 aa6.7□□□□□ -1.34
USP46-205ENST00000504078 HOXB1P14653 301 aaPredicted RBP6.7□□□□□ -1.34
USP46-205ENST00000504078 FAM69CQ0P6D2 419 aa6.7□□□□□ -1.34
USP46-205ENST00000504078 ZNF467Q7Z7K2 595 aaPredicted RBP6.7□□□□□ -1.34
USP46-205ENST00000504078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP46-205ENST00000504078 MAPKBP1O60336 1514 aa6.7□□□□□ -1.34
USP46-205ENST00000504078 TTBK1Q5TCY1 1321 aaPredicted RBP6.69□□□□□ -1.34
USP46-205ENST00000504078 TOP2BQ02880 1626 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 ADGRL1O94910 1474 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 ERICH3Q5RHP9 1530 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 HOXB3P14651 431 aaPredicted RBP6.68□□□□□ -1.34
USP46-205ENST00000504078 ZNF710Q8N1W2 664 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 MYT1LQ9UL68 1186 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 HECW2Q9P2P5 1572 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 ERBB3P21860 1342 aa6.68□□□□□ -1.34
USP46-205ENST00000504078 WRNQ14191 1432 aaPredicted RBP eCLIP6.67□□□□□ -1.34
USP46-205ENST00000504078 PPRC1Q5VV67 1664 aaKnown RBP6.67□□□□□ -1.34
USP46-205ENST00000504078 G3V3G9 751 aa6.66□□□□□ -1.34
USP46-205ENST00000504078 DOK7Q18PE1 504 aa6.66□□□□□ -1.34
USP46-205ENST00000504078 PTGER2P43116 358 aa6.65□□□□□ -1.34
USP46-205ENST00000504078 CUL7Q14999 1698 aa6.65□□□□□ -1.35
USP46-205ENST00000504078 CHRM1P11229 460 aaPredicted RBP6.64□□□□□ -1.35
USP46-205ENST00000504078 GSE1Q14687 1217 aa6.63□□□□□ -1.35
USP46-205ENST00000504078 BOLA1Q9Y3E2 137 aa6.63□□□□□ -1.35
USP46-205ENST00000504078 RIMBP2O15034 1052 aa6.62□□□□□ -1.35
USP46-205ENST00000504078 PSEN1P49768 467 aa6.62□□□□□ -1.35
USP46-205ENST00000504078 JPH4Q96JJ6 628 aa6.62□□□□□ -1.35
USP46-205ENST00000504078 ABCC2Q92887 1545 aa6.61□□□□□ -1.35
USP46-205ENST00000504078 SUPT5HO00267 1087 aaKnown RBP6.61□□□□□ -1.35
USP46-205ENST00000504078 ZNF687Q8N1G0 1237 aa6.61□□□□□ -1.35
USP46-205ENST00000504078 ZSWIM6Q9HCJ5 1215 aa6.6□□□□□ -1.35
USP46-205ENST00000504078 ASXL2Q76L83 1435 aa6.59□□□□□ -1.35
USP46-205ENST00000504078 VARS2Q5ST30 1063 aaKnown RBP6.59□□□□□ -1.35
USP46-205ENST00000504078 DPY19L2Q6NUT2 758 aa6.59□□□□□ -1.35
USP46-205ENST00000504078 COL17A1Q9UMD9 1497 aaPredicted RBP6.59□□□□□ -1.36
USP46-205ENST00000504078 KIF21BO75037 1637 aa6.58□□□□□ -1.36
USP46-205ENST00000504078 ZCCHC11Q5TAX3 1644 aaKnown RBP6.58□□□□□ -1.36
USP46-205ENST00000504078 MAP3K4Q9Y6R4 1608 aa6.58□□□□□ -1.36
USP46-205ENST00000504078 PDAP1Q13442 181 aaKnown RBP6.57□□□□□ -1.36
USP46-205ENST00000504078 KIAA0586Q9BVV6 1533 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms