RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 URB2Q14146 1524 aaKnown RBP6.06□□□□□ -1.44
CLTC-209ENST00000498711 PDAP1Q13442 181 aaKnown RBP6.05□□□□□ -1.44
CLTC-209ENST00000498711 REM2Q8IYK8 340 aaPredicted RBP6.05□□□□□ -1.44
CLTC-209ENST00000498711 PELP1Q8IZL8 1130 aaKnown RBP6.05□□□□□ -1.44
CLTC-209ENST00000498711 TARBP1Q13395 1621 aaKnown RBP6.04□□□□□ -1.44
CLTC-209ENST00000498711 NEUROD2Q15784 382 aa6.04□□□□□ -1.44
CLTC-209ENST00000498711 MFRPQ9BY79 579 aa6.04□□□□□ -1.44
CLTC-209ENST00000498711 TOPBP1Q92547 1522 aa6.04□□□□□ -1.44
CLTC-209ENST00000498711 E2F4Q16254 413 aa6.03□□□□□ -1.44
CLTC-209ENST00000498711 EEA1Q15075 1411 aa6.03□□□□□ -1.44
CLTC-209ENST00000498711 BIVM-ERCC5R4GMW8 1640 aa6.02□□□□□ -1.45
CLTC-209ENST00000498711 SLC24A3Q9HC58 644 aa6.02□□□□□ -1.45
CLTC-209ENST00000498711 TESPA1A2RU30 521 aaPredicted RBP6.02□□□□□ -1.45
CLTC-209ENST00000498711 FXR2P51116 673 aaKnown RBP eCLIP6.01□□□□□ -1.452e-11■■□□□ 13.9
CLTC-209ENST00000498711 TNIKQ9UKE5 1360 aa6.01□□□□□ -1.45
CLTC-209ENST00000498711 EIF4G3O43432 1585 aaKnown RBP6.01□□□□□ -1.45
CLTC-209ENST00000498711 SEMA3EO15041 775 aa6□□□□□ -1.45
CLTC-209ENST00000498711 TSPYL2Q9H2G4 693 aaPredicted RBP6□□□□□ -1.45
CLTC-209ENST00000498711 PCDHB8Q9UN66 801 aa6□□□□□ -1.45
CLTC-209ENST00000498711 PCDHB13Q9Y5F0 798 aa6□□□□□ -1.45
CLTC-209ENST00000498711 PSEN1P49768 467 aa5.99□□□□□ -1.45
CLTC-209ENST00000498711 ABCA5Q8WWZ7 1642 aa5.98□□□□□ -1.45
CLTC-209ENST00000498711 ZMYND10O75800 440 aa5.98□□□□□ -1.45
CLTC-209ENST00000498711 SMYD5Q6GMV2 418 aa5.98□□□□□ -1.45
CLTC-209ENST00000498711 ZNF579Q8NAF0 562 aaKnown RBP5.98□□□□□ -1.45
CLTC-209ENST00000498711 MAGI1Q96QZ7 1491 aaPredicted RBP5.97□□□□□ -1.45
CLTC-209ENST00000498711 PITPNM1O00562 1244 aa5.97□□□□□ -1.45
CLTC-209ENST00000498711 PPP1R37O75864 691 aa5.97□□□□□ -1.45
CLTC-209ENST00000498711 PBRM1Q86U86 1689 aa5.97□□□□□ -1.45
CLTC-209ENST00000498711 NLRP6P59044 892 aa5.96□□□□□ -1.45
CLTC-209ENST00000498711 TOP2BQ02880 1626 aa5.96□□□□□ -1.46
CLTC-209ENST00000498711 FBXO22Q8NEZ5 403 aa5.96□□□□□ -1.46
CLTC-209ENST00000498711 POLA1P09884 1462 aaPredicted RBP5.95□□□□□ -1.46
CLTC-209ENST00000498711 CEP162Q5TB80 1403 aa5.95□□□□□ -1.46
CLTC-209ENST00000498711 ABCA10Q8WWZ4 1543 aa5.95□□□□□ -1.46
CLTC-209ENST00000498711 CLASP1Q7Z460 1538 aa5.95□□□□□ -1.46
CLTC-209ENST00000498711 KIF21BO75037 1637 aa5.95□□□□□ -1.46
CLTC-209ENST00000498711 SOX12O15370 315 aa5.95□□□□□ -1.46
CLTC-209ENST00000498711 FAM9AQ8IZU1 332 aaPredicted RBP5.95□□□□□ -1.46
CLTC-209ENST00000498711 CCDC61Q9Y6R9 512 aa5.95□□□□□ -1.46
CLTC-209ENST00000498711 CHD1O14646 1710 aa5.94□□□□□ -1.46
CLTC-209ENST00000498711 CLCN6P51797 869 aa5.94□□□□□ -1.46
CLTC-209ENST00000498711 EFCAB3Q8N7B9 438 aa5.94□□□□□ -1.46
CLTC-209ENST00000498711 CUX1P39880 1505 aa5.94□□□□□ -1.46
CLTC-209ENST00000498711 SYNJ1O43426 1573 aa5.94□□□□□ -1.46
CLTC-209ENST00000498711 NCKAP5LQ9HCH0 1330 aa5.93□□□□□ -1.46
CLTC-209ENST00000498711 SOGA1O94964 1423 aa5.93□□□□□ -1.46
CLTC-209ENST00000498711 PIP4P2Q8N4L2 257 aa5.93□□□□□ -1.46
CLTC-209ENST00000498711 ACIN1Q9UKV3 1341 aaKnown RBP5.93□□□□□ -1.46
CLTC-209ENST00000498711 CABP2Q9NPB3 220 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 PHF8Q9UPP1 1060 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 FARP1Q9Y4F1 1045 aaPredicted RBP5.92□□□□□ -1.46
CLTC-209ENST00000498711 ERICH3Q5RHP9 1530 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 CHADLQ6NUI6 762 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 BARGINQ6ZT62 677 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 ARIH1Q9Y4X5 557 aaPredicted RBP5.92□□□□□ -1.46
CLTC-209ENST00000498711 GOLGA3Q08378 1498 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 GRIN2BQ13224 1484 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 PDE4AP27815 886 aa5.92□□□□□ -1.46
CLTC-209ENST00000498711 LARP6Q9BRS8 491 aaKnown RBP5.92□□□□□ -1.46
CLTC-209ENST00000498711 ADAMTS12P58397 1594 aa5.91□□□□□ -1.46
CLTC-209ENST00000498711 FGD5Q6ZNL6 1462 aa5.91□□□□□ -1.46
CLTC-209ENST00000498711 MFSD10Q14728 455 aa5.91□□□□□ -1.46
CLTC-209ENST00000498711 RUSC2Q8N2Y8 1516 aa5.9□□□□□ -1.46
CLTC-209ENST00000498711 SHROOM2Q13796 1616 aa5.9□□□□□ -1.46
CLTC-209ENST00000498711 IFNL1Q8IU54 200 aa5.9□□□□□ -1.46
CLTC-209ENST00000498711 DDX27Q96GQ7 796 aaKnown RBP5.9□□□□□ -1.47
CLTC-209ENST00000498711 SYNJ2O15056 1496 aa5.9□□□□□ -1.47
CLTC-209ENST00000498711 CUL7Q14999 1698 aa5.9□□□□□ -1.47
CLTC-209ENST00000498711 AK7Q96M32 723 aa5.89□□□□□ -1.47
CLTC-209ENST00000498711 RIMBP3CA6NJZ7 1639 aa5.89□□□□□ -1.47
CLTC-209ENST00000498711 RIMBP3BA6NNM3 1639 aa5.89□□□□□ -1.47
CLTC-209ENST00000498711 RIMBP3Q9UFD9 1639 aa5.89□□□□□ -1.47
CLTC-209ENST00000498711 CRISPLD2Q9H0B8 497 aa5.88□□□□□ -1.47
CLTC-209ENST00000498711 GPIHBP1Q8IV16 184 aa5.88□□□□□ -1.47
CLTC-209ENST00000498711 ZNF608Q9ULD9 1512 aaPredicted RBP5.88□□□□□ -1.47
CLTC-209ENST00000498711 PAK3O75914 559 aaPredicted RBP5.88□□□□□ -1.47
CLTC-209ENST00000498711 CAMK2BQ13554 666 aa5.87□□□□□ -1.47
CLTC-209ENST00000498711 GPBP1L1Q9HC44 474 aaPredicted RBP5.87□□□□□ -1.47
CLTC-209ENST00000498711 NEUROD1Q13562 356 aa5.87□□□□□ -1.47
CLTC-209ENST00000498711 CCER1Q8TC90 406 aaPredicted RBP5.86□□□□□ -1.47
CLTC-209ENST00000498711 ARHGEF11O15085 1522 aa5.86□□□□□ -1.47
CLTC-209ENST00000498711 MAP3K13O43283 966 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 DIEXFQ68CQ4 756 aaKnown RBP5.85□□□□□ -1.47
CLTC-209ENST00000498711 KRI1Q8N9T8 703 aaKnown RBP5.85□□□□□ -1.47
CLTC-209ENST00000498711 SNAPC4Q5SXM2 1469 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 NUP160Q12769 1436 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 VPS8Q8N3P4 1428 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 RBM26Q5T8P6 1007 aaKnown RBP5.85□□□□□ -1.47
CLTC-209ENST00000498711 MS4A4AQ96JQ5 239 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 KDM4CQ9H3R0 1056 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 GAPVD1Q14C86 1478 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 ZNF316A6NFI3 1004 aaPredicted RBP5.85□□□□□ -1.47
CLTC-209ENST00000498711 IL27Q8NEV9 243 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 ZMYND15Q9H091 742 aa5.85□□□□□ -1.47
CLTC-209ENST00000498711 SP7Q8TDD2 431 aaPredicted RBP5.84□□□□□ -1.47
CLTC-209ENST00000498711 KIF12Q96FN5 646 aa5.84□□□□□ -1.47
CLTC-209ENST00000498711 FHAD1B1AJZ9 1412 aa5.83□□□□□ -1.48
CLTC-209ENST00000498711 MLLT3P42568 568 aaPredicted RBP5.83□□□□□ -1.48
CLTC-209ENST00000498711 CLIP1P30622 1438 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms