RNA–Protein interactions for RNA: ENST00000496477.1

ITGAV-207, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 437 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-207ENST00000496477 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
ITGAV-207ENST00000496477 SNPHO15079 494 aa13.24□□□□□ -0.29
ITGAV-207ENST00000496477 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
ITGAV-207ENST00000496477 WDR62O43379 1518 aa13.19□□□□□ -0.3
ITGAV-207ENST00000496477 G3V3G9 751 aa13.19□□□□□ -0.3
ITGAV-207ENST00000496477 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
ITGAV-207ENST00000496477 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
ITGAV-207ENST00000496477 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
ITGAV-207ENST00000496477 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
ITGAV-207ENST00000496477 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
ITGAV-207ENST00000496477 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
ITGAV-207ENST00000496477 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
ITGAV-207ENST00000496477 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
ITGAV-207ENST00000496477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
ITGAV-207ENST00000496477 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
ITGAV-207ENST00000496477 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
ITGAV-207ENST00000496477 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
ITGAV-207ENST00000496477 CFTRP13569 1480 aa13.08□□□□□ -0.32
ITGAV-207ENST00000496477 WIZO95785 1651 aa13.06□□□□□ -0.32
ITGAV-207ENST00000496477 SOX12O15370 315 aa13.05□□□□□ -0.32
ITGAV-207ENST00000496477 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
ITGAV-207ENST00000496477 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
ITGAV-207ENST00000496477 EMP3P54852 163 aa13□□□□□ -0.33
ITGAV-207ENST00000496477 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
ITGAV-207ENST00000496477 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
ITGAV-207ENST00000496477 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
ITGAV-207ENST00000496477 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
ITGAV-207ENST00000496477 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
ITGAV-207ENST00000496477 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
ITGAV-207ENST00000496477 STK24Q9Y6E0 443 aa12.95□□□□□ -0.34
ITGAV-207ENST00000496477 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
ITGAV-207ENST00000496477 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
ITGAV-207ENST00000496477 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
ITGAV-207ENST00000496477 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
ITGAV-207ENST00000496477 NLRP6P59044 892 aa12.92□□□□□ -0.34
ITGAV-207ENST00000496477 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
ITGAV-207ENST00000496477 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
ITGAV-207ENST00000496477 TOP2AP11388 1531 aaKnown RBP12.92□□□□□ -0.34
ITGAV-207ENST00000496477 STK25O00506 426 aa12.91□□□□□ -0.34
ITGAV-207ENST00000496477 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
ITGAV-207ENST00000496477 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
ITGAV-207ENST00000496477 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
ITGAV-207ENST00000496477 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
ITGAV-207ENST00000496477 PKD2Q13563 968 aa12.9□□□□□ -0.34
ITGAV-207ENST00000496477 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
ITGAV-207ENST00000496477 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
ITGAV-207ENST00000496477 POTEB3A0JP26 581 aa12.88□□□□□ -0.35
ITGAV-207ENST00000496477 POTEBQ6S5H4 581 aa12.88□□□□□ -0.35
ITGAV-207ENST00000496477 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
ITGAV-207ENST00000496477 RGL2O15211 777 aa12.87□□□□□ -0.35
ITGAV-207ENST00000496477 FBXO22Q8NEZ5 403 aa12.87□□□□□ -0.35
ITGAV-207ENST00000496477 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
ITGAV-207ENST00000496477 HOXB1P14653 301 aaPredicted RBP12.86□□□□□ -0.35
ITGAV-207ENST00000496477 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
ITGAV-207ENST00000496477 SPNS2Q8IVW8 549 aa12.84□□□□□ -0.35
ITGAV-207ENST00000496477 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
ITGAV-207ENST00000496477 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
ITGAV-207ENST00000496477 CCDC88BA6NC98 1476 aa12.81□□□□□ -0.36
ITGAV-207ENST00000496477 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
ITGAV-207ENST00000496477 ERBB3P21860 1342 aa12.79□□□□□ -0.36
ITGAV-207ENST00000496477 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
ITGAV-207ENST00000496477 KRTAP3-3Q9BYR6 98 aa12.78□□□□□ -0.36
ITGAV-207ENST00000496477 KRTAP3-2Q9BYR7 98 aa12.78□□□□□ -0.36
ITGAV-207ENST00000496477 AQRO60306 1485 aaKnown RBP eCLIP12.77□□□□□ -0.37
ITGAV-207ENST00000496477 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
ITGAV-207ENST00000496477 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
ITGAV-207ENST00000496477 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
ITGAV-207ENST00000496477 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
ITGAV-207ENST00000496477 ARAP1Q96P48 1450 aa12.72□□□□□ -0.37
ITGAV-207ENST00000496477 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
ITGAV-207ENST00000496477 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
ITGAV-207ENST00000496477 SOGA1O94964 1423 aa12.69□□□□□ -0.38
ITGAV-207ENST00000496477 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
ITGAV-207ENST00000496477 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
ITGAV-207ENST00000496477 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
ITGAV-207ENST00000496477 C2orf72A6NCS6 295 aa12.67□□□□□ -0.38
ITGAV-207ENST00000496477 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
ITGAV-207ENST00000496477 CHD1O14646 1710 aa12.67□□□□□ -0.38
ITGAV-207ENST00000496477 KIF3CO14782 793 aa12.65□□□□□ -0.38
ITGAV-207ENST00000496477 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
ITGAV-207ENST00000496477 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
ITGAV-207ENST00000496477 PPP1R37O75864 691 aa12.62□□□□□ -0.39
ITGAV-207ENST00000496477 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
ITGAV-207ENST00000496477 TMC2Q8TDI7 906 aa12.61□□□□□ -0.39
ITGAV-207ENST00000496477 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
ITGAV-207ENST00000496477 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
ITGAV-207ENST00000496477 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
ITGAV-207ENST00000496477 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
ITGAV-207ENST00000496477 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
ITGAV-207ENST00000496477 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
ITGAV-207ENST00000496477 GRIN2BQ13224 1484 aa12.58□□□□□ -0.4
ITGAV-207ENST00000496477 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
ITGAV-207ENST00000496477 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
ITGAV-207ENST00000496477 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
ITGAV-207ENST00000496477 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
ITGAV-207ENST00000496477 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
ITGAV-207ENST00000496477 NUDT7P0C024 238 aa12.53□□□□□ -0.4
ITGAV-207ENST00000496477 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
ITGAV-207ENST00000496477 SLC34A2O95436 690 aa12.51□□□□□ -0.41
ITGAV-207ENST00000496477 PCDHGA4Q9Y5G9 962 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms