RNA–Protein interactions for RNA: ENST00000496477.1

ITGAV-207, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 437 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-207ENST00000496477 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
ITGAV-207ENST00000496477 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
ITGAV-207ENST00000496477 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
ITGAV-207ENST00000496477 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
ITGAV-207ENST00000496477 FOXD1Q16676 465 aa22.99■■□□□ 1.27
ITGAV-207ENST00000496477 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
ITGAV-207ENST00000496477 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
ITGAV-207ENST00000496477 PIAS4Q8N2W9 510 aaPredicted RBP21.51■■□□□ 1.03
ITGAV-207ENST00000496477 MSH5O43196 834 aa21.49■■□□□ 1.03
ITGAV-207ENST00000496477 ADRA2BP18089 450 aa21.48■■□□□ 1.03
ITGAV-207ENST00000496477 POTEDQ86YR6 584 aa20.88■□□□□ 0.93
ITGAV-207ENST00000496477 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
ITGAV-207ENST00000496477 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
ITGAV-207ENST00000496477 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
ITGAV-207ENST00000496477 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
ITGAV-207ENST00000496477 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
ITGAV-207ENST00000496477 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
ITGAV-207ENST00000496477 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
ITGAV-207ENST00000496477 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
ITGAV-207ENST00000496477 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
ITGAV-207ENST00000496477 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
ITGAV-207ENST00000496477 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
ITGAV-207ENST00000496477 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
ITGAV-207ENST00000496477 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
ITGAV-207ENST00000496477 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
ITGAV-207ENST00000496477 KCNA4P22459 653 aa18.02■□□□□ 0.48
ITGAV-207ENST00000496477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.47
ITGAV-207ENST00000496477 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
ITGAV-207ENST00000496477 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
ITGAV-207ENST00000496477 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
ITGAV-207ENST00000496477 CAPN15O75808 1086 aa17.34■□□□□ 0.37
ITGAV-207ENST00000496477 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
ITGAV-207ENST00000496477 DSG3P32926 999 aa17.19■□□□□ 0.34
ITGAV-207ENST00000496477 APLP2Q06481 763 aa17.15■□□□□ 0.34
ITGAV-207ENST00000496477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
ITGAV-207ENST00000496477 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
ITGAV-207ENST00000496477 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
ITGAV-207ENST00000496477 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
ITGAV-207ENST00000496477 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
ITGAV-207ENST00000496477 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
ITGAV-207ENST00000496477 ABCB7O75027 752 aa16.95■□□□□ 0.3
ITGAV-207ENST00000496477 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
ITGAV-207ENST00000496477 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
ITGAV-207ENST00000496477 POLA2Q14181 598 aa16.62■□□□□ 0.25
ITGAV-207ENST00000496477 ZBTB22O15209 634 aa16.55■□□□□ 0.24
ITGAV-207ENST00000496477 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
ITGAV-207ENST00000496477 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
ITGAV-207ENST00000496477 POTEHQ6S545 545 aa16.38■□□□□ 0.21
ITGAV-207ENST00000496477 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
ITGAV-207ENST00000496477 ATXN8OSP0DMR3 200 aa16.26■□□□□ 0.19
ITGAV-207ENST00000496477 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
ITGAV-207ENST00000496477 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
ITGAV-207ENST00000496477 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
ITGAV-207ENST00000496477 FBLN2P98095 1184 aa15.92■□□□□ 0.14
ITGAV-207ENST00000496477 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
ITGAV-207ENST00000496477 ABCC9O60706 1549 aa15.85■□□□□ 0.13
ITGAV-207ENST00000496477 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
ITGAV-207ENST00000496477 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
ITGAV-207ENST00000496477 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
ITGAV-207ENST00000496477 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
ITGAV-207ENST00000496477 SPDYE2Q495Y8 402 aa15.77■□□□□ 0.12
ITGAV-207ENST00000496477 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
ITGAV-207ENST00000496477 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.11
ITGAV-207ENST00000496477 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
ITGAV-207ENST00000496477 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
ITGAV-207ENST00000496477 FXR2P51116 673 aaKnown RBP eCLIP15.57■□□□□ 0.08
ITGAV-207ENST00000496477 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
ITGAV-207ENST00000496477 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
ITGAV-207ENST00000496477 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
ITGAV-207ENST00000496477 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
ITGAV-207ENST00000496477 HAX1O00165 279 aa15.4■□□□□ 0.06
ITGAV-207ENST00000496477 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
ITGAV-207ENST00000496477 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
ITGAV-207ENST00000496477 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
ITGAV-207ENST00000496477 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
ITGAV-207ENST00000496477 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
ITGAV-207ENST00000496477 EVX2Q03828 476 aa15.18■□□□□ 0.02
ITGAV-207ENST00000496477 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
ITGAV-207ENST00000496477 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
ITGAV-207ENST00000496477 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
ITGAV-207ENST00000496477 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
ITGAV-207ENST00000496477 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
ITGAV-207ENST00000496477 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
ITGAV-207ENST00000496477 GABBR2O75899 941 aa14.85□□□□□ -0.03
ITGAV-207ENST00000496477 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
ITGAV-207ENST00000496477 NACADO15069 1562 aa14.85□□□□□ -0.03
ITGAV-207ENST00000496477 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
ITGAV-207ENST00000496477 PROM2Q8N271 834 aa14.68□□□□□ -0.06
ITGAV-207ENST00000496477 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
ITGAV-207ENST00000496477 CLCN6P51797 869 aa14.61□□□□□ -0.07
ITGAV-207ENST00000496477 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
ITGAV-207ENST00000496477 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
ITGAV-207ENST00000496477 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
ITGAV-207ENST00000496477 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
ITGAV-207ENST00000496477 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
ITGAV-207ENST00000496477 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
ITGAV-207ENST00000496477 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
ITGAV-207ENST00000496477 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
ITGAV-207ENST00000496477 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
ITGAV-207ENST00000496477 PHF12Q96QT6 1004 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms