RNA–Protein interactions for RNA: ENST00000493418.1

HMGN2-209, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 1,496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-209ENST00000493418 CFTRP13569 1480 aa10.51□□□□□ -0.73
HMGN2-209ENST00000493418 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
HMGN2-209ENST00000493418 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
HMGN2-209ENST00000493418 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
HMGN2-209ENST00000493418 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
HMGN2-209ENST00000493418 L3MBTL3Q96JM7 780 aaPredicted RBP10.49□□□□□ -0.73
HMGN2-209ENST00000493418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
HMGN2-209ENST00000493418 ST18O60284 1047 aa10.47□□□□□ -0.73
HMGN2-209ENST00000493418 SNPHO15079 494 aa10.45□□□□□ -0.74
HMGN2-209ENST00000493418 KIF21BO75037 1637 aa10.44□□□□□ -0.74
HMGN2-209ENST00000493418 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
HMGN2-209ENST00000493418 CUX1P39880 1505 aa10.43□□□□□ -0.74
HMGN2-209ENST00000493418 TNIKQ9UKE5 1360 aa10.43□□□□□ -0.74
HMGN2-209ENST00000493418 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
HMGN2-209ENST00000493418 PCGF6Q9BYE7 350 aa10.42□□□□□ -0.74
HMGN2-209ENST00000493418 CADPSQ9ULU8 1353 aa10.41□□□□□ -0.74
HMGN2-209ENST00000493418 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
HMGN2-209ENST00000493418 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
HMGN2-209ENST00000493418 GOLGA3Q08378 1498 aa10.4□□□□□ -0.74
HMGN2-209ENST00000493418 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
HMGN2-209ENST00000493418 CEP164Q9UPV0 1460 aa10.39□□□□□ -0.75
HMGN2-209ENST00000493418 TMEM121BQ9BXQ6 578 aaPredicted RBP10.38□□□□□ -0.75
HMGN2-209ENST00000493418 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
HMGN2-209ENST00000493418 CEP162Q5TB80 1403 aa10.36□□□□□ -0.75
HMGN2-209ENST00000493418 G3V3G9 751 aa10.34□□□□□ -0.75
HMGN2-209ENST00000493418 HRCP23327 699 aa10.34□□□□□ -0.75
HMGN2-209ENST00000493418 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
HMGN2-209ENST00000493418 ERICH3Q5RHP9 1530 aa10.32□□□□□ -0.76
HMGN2-209ENST00000493418 PRXQ9BXM0 1461 aa10.3□□□□□ -0.76
HMGN2-209ENST00000493418 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
HMGN2-209ENST00000493418 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
HMGN2-209ENST00000493418 EFCAB3Q8N7B9 438 aa10.3□□□□□ -0.76
HMGN2-209ENST00000493418 FANCD2Q9BXW9 1451 aa10.29□□□□□ -0.76
HMGN2-209ENST00000493418 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
HMGN2-209ENST00000493418 UBTFP17480 764 aaKnown RBP10.29□□□□□ -0.76
HMGN2-209ENST00000493418 MARVELD3Q96A59 401 aa10.29□□□□□ -0.76
HMGN2-209ENST00000493418 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
HMGN2-209ENST00000493418 NESP48681 1621 aa10.27□□□□□ -0.77
HMGN2-209ENST00000493418 DNMBPQ6XZF7 1577 aa10.27□□□□□ -0.77
HMGN2-209ENST00000493418 FGD5Q6ZNL6 1462 aa10.26□□□□□ -0.77
HMGN2-209ENST00000493418 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
HMGN2-209ENST00000493418 CLIP1P30622 1438 aa10.23□□□□□ -0.77
HMGN2-209ENST00000493418 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
HMGN2-209ENST00000493418 SOX12O15370 315 aa10.23□□□□□ -0.77
HMGN2-209ENST00000493418 EMP3P54852 163 aa10.23□□□□□ -0.77
HMGN2-209ENST00000493418 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
HMGN2-209ENST00000493418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
HMGN2-209ENST00000493418 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
HMGN2-209ENST00000493418 CUX2O14529 1486 aa10.21□□□□□ -0.78
HMGN2-209ENST00000493418 IGF1RP08069 1367 aa10.2□□□□□ -0.78
HMGN2-209ENST00000493418 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
HMGN2-209ENST00000493418 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
HMGN2-209ENST00000493418 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
HMGN2-209ENST00000493418 KIF21AQ7Z4S6 1674 aa10.19□□□□□ -0.78
HMGN2-209ENST00000493418 POLA1P09884 1462 aaPredicted RBP10.18□□□□□ -0.78
HMGN2-209ENST00000493418 URB2Q14146 1524 aaKnown RBP10.18□□□□□ -0.78
HMGN2-209ENST00000493418 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
HMGN2-209ENST00000493418 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
HMGN2-209ENST00000493418 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
HMGN2-209ENST00000493418 FAM205CA6NFA0 338 aa10.16□□□□□ -0.78
HMGN2-209ENST00000493418 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
HMGN2-209ENST00000493418 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
HMGN2-209ENST00000493418 DOK7Q18PE1 504 aa10.15□□□□□ -0.78
HMGN2-209ENST00000493418 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
HMGN2-209ENST00000493418 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
HMGN2-209ENST00000493418 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
HMGN2-209ENST00000493418 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.78
HMGN2-209ENST00000493418 ARAP1Q96P48 1450 aa10.15□□□□□ -0.79
HMGN2-209ENST00000493418 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
HMGN2-209ENST00000493418 CARMIL1Q5VZK9 1371 aa10.13□□□□□ -0.79
HMGN2-209ENST00000493418 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
HMGN2-209ENST00000493418 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
HMGN2-209ENST00000493418 MS4A4AQ96JQ5 239 aa10.13□□□□□ -0.79
HMGN2-209ENST00000493418 CUL7Q14999 1698 aa10.13□□□□□ -0.79
HMGN2-209ENST00000493418 HOXB1P14653 301 aaPredicted RBP10.11□□□□□ -0.79
HMGN2-209ENST00000493418 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
HMGN2-209ENST00000493418 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
HMGN2-209ENST00000493418 BCL11BQ9C0K0 894 aaPredicted RBP10.1□□□□□ -0.79
HMGN2-209ENST00000493418 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
HMGN2-209ENST00000493418 TARBP1Q13395 1621 aaKnown RBP10.1□□□□□ -0.79
HMGN2-209ENST00000493418 RIMBP2O15034 1052 aa10.1□□□□□ -0.79
HMGN2-209ENST00000493418 NLRP6P59044 892 aa10.1□□□□□ -0.79
HMGN2-209ENST00000493418 ZEB1P37275 1124 aaPredicted RBP10.09□□□□□ -0.79
HMGN2-209ENST00000493418 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
HMGN2-209ENST00000493418 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
HMGN2-209ENST00000493418 STK24Q9Y6E0 443 aa10.08□□□□□ -0.8
HMGN2-209ENST00000493418 CTTNBP2Q8WZ74 1663 aa10.07□□□□□ -0.8
HMGN2-209ENST00000493418 PLCB2Q00722 1185 aa10.06□□□□□ -0.8
HMGN2-209ENST00000493418 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
HMGN2-209ENST00000493418 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
HMGN2-209ENST00000493418 ERBB3P21860 1342 aa10.06□□□□□ -0.8
HMGN2-209ENST00000493418 MRC2Q9UBG0 1479 aa10.05□□□□□ -0.8
HMGN2-209ENST00000493418 STK25O00506 426 aa10.04□□□□□ -0.8
HMGN2-209ENST00000493418 FBXO22Q8NEZ5 403 aa10.04□□□□□ -0.8
HMGN2-209ENST00000493418 ZSWIM6Q9HCJ5 1215 aa10.04□□□□□ -0.8
HMGN2-209ENST00000493418 GAPVD1Q14C86 1478 aa10.03□□□□□ -0.8
HMGN2-209ENST00000493418 PBRM1Q86U86 1689 aa10.02□□□□□ -0.81
HMGN2-209ENST00000493418 RANGAP1P46060 587 aaPredicted RBP10.02□□□□□ -0.81
HMGN2-209ENST00000493418 MAP3K1Q13233 1512 aa10.02□□□□□ -0.81
HMGN2-209ENST00000493418 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms