RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 MAP3K1Q13233 1512 aa20.57■□□□□ 0.88
TNFRSF1B-203ENST00000492361 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
TNFRSF1B-203ENST00000492361 NUP155O75694 1391 aa20.56■□□□□ 0.88
TNFRSF1B-203ENST00000492361 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
TNFRSF1B-203ENST00000492361 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
TNFRSF1B-203ENST00000492361 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
TNFRSF1B-203ENST00000492361 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF1B-203ENST00000492361 MSH5O43196 834 aa20.51■□□□□ 0.87
TNFRSF1B-203ENST00000492361 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
TNFRSF1B-203ENST00000492361 PTPN23Q9H3S7 1636 aa20.51■□□□□ 0.87
TNFRSF1B-203ENST00000492361 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
TNFRSF1B-203ENST00000492361 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
TNFRSF1B-203ENST00000492361 EPRSP07814 1512 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-203ENST00000492361 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1B-203ENST00000492361 USP47Q96K76 1375 aa20.45■□□□□ 0.86
TNFRSF1B-203ENST00000492361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.45■□□□□ 0.862e-7■■■□□ 18.1
TNFRSF1B-203ENST00000492361 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
TNFRSF1B-203ENST00000492361 MAGI3Q5TCQ9 1506 aa20.44■□□□□ 0.86
TNFRSF1B-203ENST00000492361 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
TNFRSF1B-203ENST00000492361 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
TNFRSF1B-203ENST00000492361 CFAP43Q8NDM7 1665 aa20.41■□□□□ 0.86
TNFRSF1B-203ENST00000492361 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1B-203ENST00000492361 PLIN1O60240 522 aa20.4■□□□□ 0.86
TNFRSF1B-203ENST00000492361 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1B-203ENST00000492361 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.86
TNFRSF1B-203ENST00000492361 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-203ENST00000492361 ANKRD30BQ9BXX2 1392 aa20.38■□□□□ 0.85
TNFRSF1B-203ENST00000492361 NBPF1Q3BBV0 1214 aa20.38■□□□□ 0.85
TNFRSF1B-203ENST00000492361 KDM6BO15054 1643 aa20.38■□□□□ 0.85
TNFRSF1B-203ENST00000492361 DAPK1P53355 1430 aa20.37■□□□□ 0.85
TNFRSF1B-203ENST00000492361 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
TNFRSF1B-203ENST00000492361 ABCC5O15440 1437 aa20.37■□□□□ 0.85
TNFRSF1B-203ENST00000492361 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
TNFRSF1B-203ENST00000492361 PLB1Q6P1J6 1458 aa20.36■□□□□ 0.85
TNFRSF1B-203ENST00000492361 CUL7Q14999 1698 aa20.35■□□□□ 0.85
TNFRSF1B-203ENST00000492361 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
TNFRSF1B-203ENST00000492361 SKAP1Q86WV1 359 aa20.35■□□□□ 0.85
TNFRSF1B-203ENST00000492361 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
TNFRSF1B-203ENST00000492361 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
TNFRSF1B-203ENST00000492361 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
TNFRSF1B-203ENST00000492361 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
TNFRSF1B-203ENST00000492361 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
TNFRSF1B-203ENST00000492361 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
TNFRSF1B-203ENST00000492361 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
TNFRSF1B-203ENST00000492361 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF1B-203ENST00000492361 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1B-203ENST00000492361 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF1B-203ENST00000492361 IQGAP2Q13576 1575 aa20.28■□□□□ 0.84
TNFRSF1B-203ENST00000492361 ZBTB47Q9UFB7 747 aaPredicted RBP20.28■□□□□ 0.84
TNFRSF1B-203ENST00000492361 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
TNFRSF1B-203ENST00000492361 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1B-203ENST00000492361 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
TNFRSF1B-203ENST00000492361 NCOA1Q15788 1441 aa20.25■□□□□ 0.83
TNFRSF1B-203ENST00000492361 MIA2Q96PC5 1412 aa20.25■□□□□ 0.83
TNFRSF1B-203ENST00000492361 PANK3Q9H999 370 aa20.24■□□□□ 0.83
TNFRSF1B-203ENST00000492361 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1B-203ENST00000492361 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
TNFRSF1B-203ENST00000492361 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1B-203ENST00000492361 RCAN3Q9UKA8 241 aa20.23■□□□□ 0.83
TNFRSF1B-203ENST00000492361 HECW1Q76N89 1606 aa20.23■□□□□ 0.83
TNFRSF1B-203ENST00000492361 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1B-203ENST00000492361 CARMIL2Q6F5E8 1435 aa20.22■□□□□ 0.83
TNFRSF1B-203ENST00000492361 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
TNFRSF1B-203ENST00000492361 WDR43Q15061 677 aaKnown RBP eCLIP20.2■□□□□ 0.82
TNFRSF1B-203ENST00000492361 CCDC146Q8IYE0 955 aa20.2■□□□□ 0.82
TNFRSF1B-203ENST00000492361 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1B-203ENST00000492361 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
TNFRSF1B-203ENST00000492361 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1B-203ENST00000492361 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1B-203ENST00000492361 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
TNFRSF1B-203ENST00000492361 TROQ12816 1431 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-203ENST00000492361 KNSTRNQ9Y448 316 aa20.16■□□□□ 0.82
TNFRSF1B-203ENST00000492361 KIAA1107Q9UPP5 1409 aa20.16■□□□□ 0.82
TNFRSF1B-203ENST00000492361 DEKP35659 375 aaKnown RBP20.16■□□□□ 0.82
TNFRSF1B-203ENST00000492361 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
TNFRSF1B-203ENST00000492361 RGS3P49796 1198 aa20.15■□□□□ 0.82
TNFRSF1B-203ENST00000492361 CAMSAP2Q08AD1 1489 aa20.15■□□□□ 0.82
TNFRSF1B-203ENST00000492361 MYBBP1AQ9BQG0 1328 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1B-203ENST00000492361 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
TNFRSF1B-203ENST00000492361 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
TNFRSF1B-203ENST00000492361 KTN1Q86UP2 1357 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1B-203ENST00000492361 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
TNFRSF1B-203ENST00000492361 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
TNFRSF1B-203ENST00000492361 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1B-203ENST00000492361 PTPRGP23470 1445 aa20.12■□□□□ 0.81
TNFRSF1B-203ENST00000492361 SLC4A3P48751 1232 aa20.12■□□□□ 0.81
TNFRSF1B-203ENST00000492361 NLRP13Q86W25 1043 aa20.12■□□□□ 0.81
TNFRSF1B-203ENST00000492361 LRRIQ1Q96JM4 1722 aa20.12■□□□□ 0.81
TNFRSF1B-203ENST00000492361 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-203ENST00000492361 RRP1P56182 461 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1B-203ENST00000492361 TMF1P82094 1093 aa20.11■□□□□ 0.81
TNFRSF1B-203ENST00000492361 RTN4Q9NQC3 1192 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1B-203ENST00000492361 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
TNFRSF1B-203ENST00000492361 ROCK1Q13464 1354 aa20.09■□□□□ 0.81
TNFRSF1B-203ENST00000492361 RALBP1Q15311 655 aa20.09■□□□□ 0.81
TNFRSF1B-203ENST00000492361 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
TNFRSF1B-203ENST00000492361 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
TNFRSF1B-203ENST00000492361 KDM5BQ9UGL1 1544 aa20.09■□□□□ 0.81
TNFRSF1B-203ENST00000492361 AFAP1Q8N556 730 aa20.09■□□□□ 0.81
TNFRSF1B-203ENST00000492361 GPATCH8Q9UKJ3 1502 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms