RNA–Protein interactions for RNA: ENST00000489639.1

MFSD1-217, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 3

Gene MFSD1, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-217ENST00000489639 LMTK3Q96Q04 1460 aa10.04□□□□□ -0.8
MFSD1-217ENST00000489639 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
MFSD1-217ENST00000489639 GRIN2BQ13224 1484 aa10.03□□□□□ -0.8
MFSD1-217ENST00000489639 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
MFSD1-217ENST00000489639 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
MFSD1-217ENST00000489639 FHAD1B1AJZ9 1412 aa9.99□□□□□ -0.81
MFSD1-217ENST00000489639 CLIP1P30622 1438 aa9.99□□□□□ -0.81
MFSD1-217ENST00000489639 AQRO60306 1485 aaKnown RBP eCLIP9.99□□□□□ -0.81
MFSD1-217ENST00000489639 ZNF608Q9ULD9 1512 aaPredicted RBP9.99□□□□□ -0.81
MFSD1-217ENST00000489639 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
MFSD1-217ENST00000489639 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
MFSD1-217ENST00000489639 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
MFSD1-217ENST00000489639 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
MFSD1-217ENST00000489639 SLAIN1Q8ND83 568 aa9.96□□□□□ -0.82
MFSD1-217ENST00000489639 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
MFSD1-217ENST00000489639 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
MFSD1-217ENST00000489639 KIF12Q96FN5 646 aa9.95□□□□□ -0.82
MFSD1-217ENST00000489639 SNAPC4Q5SXM2 1469 aa9.93□□□□□ -0.82
MFSD1-217ENST00000489639 SEC24BO95487 1268 aa9.92□□□□□ -0.82
MFSD1-217ENST00000489639 MARVELD3Q96A59 401 aa9.91□□□□□ -0.82
MFSD1-217ENST00000489639 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.82
MFSD1-217ENST00000489639 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.82
MFSD1-217ENST00000489639 EFCAB5A4FU69 1503 aa9.9□□□□□ -0.82
MFSD1-217ENST00000489639 SYNJ2O15056 1496 aa9.9□□□□□ -0.83
MFSD1-217ENST00000489639 GRIN2AQ12879 1464 aa9.89□□□□□ -0.83
MFSD1-217ENST00000489639 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
MFSD1-217ENST00000489639 ARAP1Q96P48 1450 aa9.88□□□□□ -0.83
MFSD1-217ENST00000489639 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
MFSD1-217ENST00000489639 TIE1P35590 1138 aa9.88□□□□□ -0.83
MFSD1-217ENST00000489639 MAP3K13O43283 966 aa9.87□□□□□ -0.83
MFSD1-217ENST00000489639 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
MFSD1-217ENST00000489639 CHMP7Q8WUX9 453 aaPredicted RBP9.86□□□□□ -0.83
MFSD1-217ENST00000489639 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
MFSD1-217ENST00000489639 KIAA0586Q9BVV6 1533 aa9.85□□□□□ -0.83
MFSD1-217ENST00000489639 NUP160Q12769 1436 aa9.83□□□□□ -0.84
MFSD1-217ENST00000489639 SAMD9Q5K651 1589 aa9.83□□□□□ -0.84
MFSD1-217ENST00000489639 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
MFSD1-217ENST00000489639 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
MFSD1-217ENST00000489639 TRIM35Q9UPQ4 493 aa9.82□□□□□ -0.84
MFSD1-217ENST00000489639 UGGT2Q9NYU1 1516 aa9.82□□□□□ -0.84
MFSD1-217ENST00000489639 FMN1Q68DA7 1419 aa9.81□□□□□ -0.84
MFSD1-217ENST00000489639 TRIM26Q12899 539 aaPredicted RBP9.8□□□□□ -0.84
MFSD1-217ENST00000489639 CEP170Q5SW79 1584 aa9.8□□□□□ -0.84
MFSD1-217ENST00000489639 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
MFSD1-217ENST00000489639 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
MFSD1-217ENST00000489639 TMEM121BQ9BXQ6 578 aaPredicted RBP9.79□□□□□ -0.84
MFSD1-217ENST00000489639 FHOD3Q2V2M9 1422 aa9.79□□□□□ -0.84
MFSD1-217ENST00000489639 FYCO1Q9BQS8 1478 aa9.78□□□□□ -0.84
MFSD1-217ENST00000489639 MAP3K1Q13233 1512 aa9.77□□□□□ -0.84
MFSD1-217ENST00000489639 CASKIN1Q8WXD9 1431 aa9.76□□□□□ -0.85
MFSD1-217ENST00000489639 IER5LQ5T953 404 aa9.76□□□□□ -0.85
MFSD1-217ENST00000489639 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
MFSD1-217ENST00000489639 CARMIL2Q6F5E8 1435 aa9.74□□□□□ -0.85
MFSD1-217ENST00000489639 PCF11O94913 1555 aaKnown RBP9.74□□□□□ -0.85
MFSD1-217ENST00000489639 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
MFSD1-217ENST00000489639 CHD1O14646 1710 aa9.73□□□□□ -0.85
MFSD1-217ENST00000489639 DISP1Q96F81 1524 aa9.73□□□□□ -0.85
MFSD1-217ENST00000489639 SPDYE4A6NLX3 237 aa9.73□□□□□ -0.85
MFSD1-217ENST00000489639 FBXO41Q8TF61 875 aa9.73□□□□□ -0.85
MFSD1-217ENST00000489639 PPARGC1BQ86YN6 1023 aaKnown RBP9.72□□□□□ -0.85
MFSD1-217ENST00000489639 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
MFSD1-217ENST00000489639 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
MFSD1-217ENST00000489639 TIAM1Q13009 1591 aa9.71□□□□□ -0.85
MFSD1-217ENST00000489639 CFAP43Q8NDM7 1665 aa9.7□□□□□ -0.86
MFSD1-217ENST00000489639 CCDC18Q5T9S5 1454 aa9.69□□□□□ -0.86
MFSD1-217ENST00000489639 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
MFSD1-217ENST00000489639 RASEFQ8IZ41 740 aa9.69□□□□□ -0.86
MFSD1-217ENST00000489639 SHROOM2Q13796 1616 aa9.68□□□□□ -0.86
MFSD1-217ENST00000489639 CLASP1Q7Z460 1538 aa9.68□□□□□ -0.86
MFSD1-217ENST00000489639 LRRC9Q6ZRR7 1453 aa9.67□□□□□ -0.86
MFSD1-217ENST00000489639 PRG4Q92954 1404 aaPredicted RBP9.67□□□□□ -0.86
MFSD1-217ENST00000489639 DISP3Q9P2K9 1392 aa9.67□□□□□ -0.86
MFSD1-217ENST00000489639 EMP3P54852 163 aa9.67□□□□□ -0.86
MFSD1-217ENST00000489639 HS3ST6Q96QI5 342 aa9.67□□□□□ -0.86
MFSD1-217ENST00000489639 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
MFSD1-217ENST00000489639 TTBK1Q5TCY1 1321 aaPredicted RBP9.65□□□□□ -0.86
MFSD1-217ENST00000489639 PLCG2P16885 1265 aa9.65□□□□□ -0.86
MFSD1-217ENST00000489639 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
MFSD1-217ENST00000489639 KANK4Q5T7N3 995 aaPredicted RBP9.65□□□□□ -0.86
MFSD1-217ENST00000489639 RAPGEF6Q8TEU7 1601 aa9.64□□□□□ -0.87
MFSD1-217ENST00000489639 EPRSP07814 1512 aaKnown RBP9.63□□□□□ -0.87
MFSD1-217ENST00000489639 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
MFSD1-217ENST00000489639 EHBP1L1Q8N3D4 1523 aa9.62□□□□□ -0.87
MFSD1-217ENST00000489639 FAM205CA6NFA0 338 aa9.62□□□□□ -0.87
MFSD1-217ENST00000489639 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
MFSD1-217ENST00000489639 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
MFSD1-217ENST00000489639 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
MFSD1-217ENST00000489639 PTPRGP23470 1445 aa9.62□□□□□ -0.87
MFSD1-217ENST00000489639 NUP153P49790 1475 aaKnown RBP9.61□□□□□ -0.87
MFSD1-217ENST00000489639 SNPHO15079 494 aa9.61□□□□□ -0.87
MFSD1-217ENST00000489639 RRBP1Q9P2E9 1410 aaKnown RBP9.61□□□□□ -0.87
MFSD1-217ENST00000489639 ABCA8O94911 1581 aa9.61□□□□□ -0.87
MFSD1-217ENST00000489639 PCDHB13Q9Y5F0 798 aa9.6□□□□□ -0.87
MFSD1-217ENST00000489639 PLB1Q6P1J6 1458 aa9.59□□□□□ -0.87
MFSD1-217ENST00000489639 TMEM106CQ9BVX2 250 aa9.59□□□□□ -0.87
MFSD1-217ENST00000489639 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
MFSD1-217ENST00000489639 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
MFSD1-217ENST00000489639 CDK13Q14004 1512 aaKnown RBP9.58□□□□□ -0.88
MFSD1-217ENST00000489639 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
MFSD1-217ENST00000489639 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms