RNA–Protein interactions for RNA: ENST00000485987.1

LMO7-211, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 1,087 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-211ENST00000485987 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
LMO7-211ENST00000485987 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
LMO7-211ENST00000485987 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
LMO7-211ENST00000485987 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
LMO7-211ENST00000485987 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
LMO7-211ENST00000485987 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
LMO7-211ENST00000485987 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
LMO7-211ENST00000485987 FAM9AQ8IZU1 332 aaPredicted RBP13.9□□□□□ -0.18
LMO7-211ENST00000485987 EEA1Q15075 1411 aa13.9□□□□□ -0.19
LMO7-211ENST00000485987 CLCN6P51797 869 aa13.88□□□□□ -0.19
LMO7-211ENST00000485987 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
LMO7-211ENST00000485987 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
LMO7-211ENST00000485987 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
LMO7-211ENST00000485987 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
LMO7-211ENST00000485987 IGF1RP08069 1367 aa13.86□□□□□ -0.19
LMO7-211ENST00000485987 GTPBP6O43824 516 aaPredicted RBP13.86□□□□□ -0.19
LMO7-211ENST00000485987 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
LMO7-211ENST00000485987 MAP3K13O43283 966 aa13.85□□□□□ -0.19
LMO7-211ENST00000485987 PDAP1Q13442 181 aaKnown RBP13.85□□□□□ -0.19
LMO7-211ENST00000485987 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
LMO7-211ENST00000485987 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
LMO7-211ENST00000485987 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
LMO7-211ENST00000485987 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
LMO7-211ENST00000485987 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.2
LMO7-211ENST00000485987 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
LMO7-211ENST00000485987 SNAPC4Q5SXM2 1469 aa13.81□□□□□ -0.2
LMO7-211ENST00000485987 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
LMO7-211ENST00000485987 PSEN1P49768 467 aa13.81□□□□□ -0.2
LMO7-211ENST00000485987 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
LMO7-211ENST00000485987 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
LMO7-211ENST00000485987 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
LMO7-211ENST00000485987 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
LMO7-211ENST00000485987 PBRM1Q86U86 1689 aa13.75□□□□□ -0.21
LMO7-211ENST00000485987 CUL7Q14999 1698 aa13.73□□□□□ -0.21
LMO7-211ENST00000485987 RAPGEF2Q9Y4G8 1499 aa13.73□□□□□ -0.21
LMO7-211ENST00000485987 PRXQ9BXM0 1461 aa13.7□□□□□ -0.22
LMO7-211ENST00000485987 UBTFP17480 764 aaKnown RBP13.7□□□□□ -0.22
LMO7-211ENST00000485987 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
LMO7-211ENST00000485987 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
LMO7-211ENST00000485987 RYDENQ9NUL5 291 aaKnown RBP13.69□□□□□ -0.22
LMO7-211ENST00000485987 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
LMO7-211ENST00000485987 CABP2Q9NPB3 220 aa13.65□□□□□ -0.22
LMO7-211ENST00000485987 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
LMO7-211ENST00000485987 MFRPQ9BY79 579 aa13.64□□□□□ -0.23
LMO7-211ENST00000485987 EFCAB3Q8N7B9 438 aa13.63□□□□□ -0.23
LMO7-211ENST00000485987 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
LMO7-211ENST00000485987 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
LMO7-211ENST00000485987 KIF21BO75037 1637 aa13.61□□□□□ -0.23
LMO7-211ENST00000485987 NUP160Q12769 1436 aa13.61□□□□□ -0.23
LMO7-211ENST00000485987 CHD1O14646 1710 aa13.6□□□□□ -0.23
LMO7-211ENST00000485987 BCANQ96GW7 911 aa13.6□□□□□ -0.23
LMO7-211ENST00000485987 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
LMO7-211ENST00000485987 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
LMO7-211ENST00000485987 LOC105371045A0A1W2PR82 267 aa13.57□□□□□ -0.24
LMO7-211ENST00000485987 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
LMO7-211ENST00000485987 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
LMO7-211ENST00000485987 RANGAP1P46060 587 aaPredicted RBP13.55□□□□□ -0.24
LMO7-211ENST00000485987 CEP170Q5SW79 1584 aa13.54□□□□□ -0.24
LMO7-211ENST00000485987 SOX12O15370 315 aa13.54□□□□□ -0.24
LMO7-211ENST00000485987 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
LMO7-211ENST00000485987 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
LMO7-211ENST00000485987 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
LMO7-211ENST00000485987 NLRP6P59044 892 aa13.52□□□□□ -0.25
LMO7-211ENST00000485987 CARMIL2Q6F5E8 1435 aa13.52□□□□□ -0.25
LMO7-211ENST00000485987 PPP1R37O75864 691 aa13.51□□□□□ -0.25
LMO7-211ENST00000485987 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
LMO7-211ENST00000485987 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
LMO7-211ENST00000485987 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
LMO7-211ENST00000485987 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
LMO7-211ENST00000485987 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
LMO7-211ENST00000485987 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
LMO7-211ENST00000485987 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
LMO7-211ENST00000485987 TIE1P35590 1138 aa13.46□□□□□ -0.25
LMO7-211ENST00000485987 CTTNBP2Q8WZ74 1663 aa13.45□□□□□ -0.26
LMO7-211ENST00000485987 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
LMO7-211ENST00000485987 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
LMO7-211ENST00000485987 UGGT2Q9NYU1 1516 aa13.44□□□□□ -0.26
LMO7-211ENST00000485987 TTBK1Q5TCY1 1321 aaPredicted RBP13.44□□□□□ -0.26
LMO7-211ENST00000485987 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
LMO7-211ENST00000485987 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
LMO7-211ENST00000485987 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
LMO7-211ENST00000485987 CLIP1P30622 1438 aa13.41□□□□□ -0.26
LMO7-211ENST00000485987 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
LMO7-211ENST00000485987 PTPRGP23470 1445 aa13.4□□□□□ -0.26
LMO7-211ENST00000485987 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
LMO7-211ENST00000485987 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
LMO7-211ENST00000485987 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
LMO7-211ENST00000485987 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
LMO7-211ENST00000485987 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
LMO7-211ENST00000485987 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
LMO7-211ENST00000485987 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
LMO7-211ENST00000485987 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
LMO7-211ENST00000485987 NBR1Q14596 966 aa13.34□□□□□ -0.27
LMO7-211ENST00000485987 KIAA0556O60303 1618 aa13.34□□□□□ -0.27
LMO7-211ENST00000485987 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
LMO7-211ENST00000485987 FHOD3Q2V2M9 1422 aa13.33□□□□□ -0.28
LMO7-211ENST00000485987 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
LMO7-211ENST00000485987 WDR70Q9NW82 654 aa13.33□□□□□ -0.28
LMO7-211ENST00000485987 METRNQ9UJH8 293 aa13.33□□□□□ -0.28
LMO7-211ENST00000485987 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms