RNA–Protein interactions for RNA: ENST00000485987.1

LMO7-211, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 1,087 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-211ENST00000485987 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
LMO7-211ENST00000485987 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
LMO7-211ENST00000485987 SENP3Q9H4L4 574 aaPredicted RBP23.49■■□□□ 1.35
LMO7-211ENST00000485987 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
LMO7-211ENST00000485987 FOXD1Q16676 465 aa21.92■■□□□ 1.1
LMO7-211ENST00000485987 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
LMO7-211ENST00000485987 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
LMO7-211ENST00000485987 MSH5O43196 834 aa20.67■□□□□ 0.9
LMO7-211ENST00000485987 ADRA2BP18089 450 aa20.53■□□□□ 0.88
LMO7-211ENST00000485987 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
LMO7-211ENST00000485987 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
LMO7-211ENST00000485987 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
LMO7-211ENST00000485987 KCNA4P22459 653 aa19.27■□□□□ 0.68
LMO7-211ENST00000485987 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
LMO7-211ENST00000485987 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
LMO7-211ENST00000485987 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
LMO7-211ENST00000485987 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
LMO7-211ENST00000485987 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
LMO7-211ENST00000485987 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
LMO7-211ENST00000485987 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
LMO7-211ENST00000485987 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
LMO7-211ENST00000485987 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
LMO7-211ENST00000485987 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
LMO7-211ENST00000485987 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
LMO7-211ENST00000485987 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
LMO7-211ENST00000485987 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
LMO7-211ENST00000485987 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
LMO7-211ENST00000485987 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
LMO7-211ENST00000485987 ZBTB22O15209 634 aa17.76■□□□□ 0.43
LMO7-211ENST00000485987 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
LMO7-211ENST00000485987 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
LMO7-211ENST00000485987 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
LMO7-211ENST00000485987 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
LMO7-211ENST00000485987 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
LMO7-211ENST00000485987 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
LMO7-211ENST00000485987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.324e-7■■□□□ 13.4
LMO7-211ENST00000485987 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
LMO7-211ENST00000485987 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
LMO7-211ENST00000485987 ABCC9O60706 1549 aa16.75■□□□□ 0.27
LMO7-211ENST00000485987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
LMO7-211ENST00000485987 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
LMO7-211ENST00000485987 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
LMO7-211ENST00000485987 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
LMO7-211ENST00000485987 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
LMO7-211ENST00000485987 CAPN15O75808 1086 aa16.41■□□□□ 0.22
LMO7-211ENST00000485987 APLP2Q06481 763 aa16.39■□□□□ 0.21
LMO7-211ENST00000485987 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
LMO7-211ENST00000485987 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
LMO7-211ENST00000485987 DSG3P32926 999 aa16.36■□□□□ 0.21
LMO7-211ENST00000485987 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
LMO7-211ENST00000485987 NACADO15069 1562 aa16.27■□□□□ 0.2
LMO7-211ENST00000485987 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
LMO7-211ENST00000485987 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
LMO7-211ENST00000485987 FKBP8Q14318 412 aa16.23■□□□□ 0.19
LMO7-211ENST00000485987 POTEHQ6S545 545 aa16.23■□□□□ 0.19
LMO7-211ENST00000485987 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
LMO7-211ENST00000485987 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
LMO7-211ENST00000485987 POLA2Q14181 598 aa16.03■□□□□ 0.16
LMO7-211ENST00000485987 ABCB7O75027 752 aa16■□□□□ 0.15
LMO7-211ENST00000485987 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
LMO7-211ENST00000485987 FBLN2P98095 1184 aa15.86■□□□□ 0.13
LMO7-211ENST00000485987 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
LMO7-211ENST00000485987 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
LMO7-211ENST00000485987 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
LMO7-211ENST00000485987 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
LMO7-211ENST00000485987 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
LMO7-211ENST00000485987 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
LMO7-211ENST00000485987 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
LMO7-211ENST00000485987 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
LMO7-211ENST00000485987 PROM2Q8N271 834 aa15.56■□□□□ 0.08
LMO7-211ENST00000485987 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
LMO7-211ENST00000485987 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
LMO7-211ENST00000485987 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
LMO7-211ENST00000485987 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
LMO7-211ENST00000485987 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
LMO7-211ENST00000485987 ZNF692Q9BU19 519 aaPredicted RBP15.4■□□□□ 0.06
LMO7-211ENST00000485987 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
LMO7-211ENST00000485987 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
LMO7-211ENST00000485987 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
LMO7-211ENST00000485987 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
LMO7-211ENST00000485987 VASPP50552 380 aaPredicted RBP15.28■□□□□ 0.04
LMO7-211ENST00000485987 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
LMO7-211ENST00000485987 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
LMO7-211ENST00000485987 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
LMO7-211ENST00000485987 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
LMO7-211ENST00000485987 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
LMO7-211ENST00000485987 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
LMO7-211ENST00000485987 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
LMO7-211ENST00000485987 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
LMO7-211ENST00000485987 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
LMO7-211ENST00000485987 SMARCA2P51531 1590 aa15.07■□□□□ 0
LMO7-211ENST00000485987 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
LMO7-211ENST00000485987 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
LMO7-211ENST00000485987 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
LMO7-211ENST00000485987 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
LMO7-211ENST00000485987 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
LMO7-211ENST00000485987 NCAPD3P42695 1498 aa15.02■□□□□ -0
LMO7-211ENST00000485987 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
LMO7-211ENST00000485987 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
LMO7-211ENST00000485987 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms