RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 DCAF11Q8TEB1 546 aa9.33□□□□□ -0.92
ABCA13-206ENST00000484268 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
ABCA13-206ENST00000484268 AQRO60306 1485 aaKnown RBP eCLIP9.31□□□□□ -0.92
ABCA13-206ENST00000484268 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
ABCA13-206ENST00000484268 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
ABCA13-206ENST00000484268 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
ABCA13-206ENST00000484268 FRAT2O75474 233 aaPredicted RBP9.3□□□□□ -0.92
ABCA13-206ENST00000484268 ZBTB22O15209 634 aa9.3□□□□□ -0.92
ABCA13-206ENST00000484268 NPM3O75607 178 aaKnown RBP9.3□□□□□ -0.92
ABCA13-206ENST00000484268 RRP7BPQ9NSQ0 103 aa9.3□□□□□ -0.92
ABCA13-206ENST00000484268 PLIN1O60240 522 aa9.29□□□□□ -0.92
ABCA13-206ENST00000484268 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
ABCA13-206ENST00000484268 CCDC7Q96M83 1385 aa9.29□□□□□ -0.92
ABCA13-206ENST00000484268 DNAJC5BQ9UF47 199 aa9.29□□□□□ -0.92
ABCA13-206ENST00000484268 NCOA1Q15788 1441 aa9.28□□□□□ -0.92
ABCA13-206ENST00000484268 UACAQ9BZF9 1416 aa9.28□□□□□ -0.92
ABCA13-206ENST00000484268 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
ABCA13-206ENST00000484268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCA13-206ENST00000484268 L3MBTL2Q969R5 705 aa9.28□□□□□ -0.92
ABCA13-206ENST00000484268 KIF7Q2M1P5 1343 aa9.27□□□□□ -0.93
ABCA13-206ENST00000484268 RRAGDQ9NQL2 400 aaPredicted RBP9.27□□□□□ -0.93
ABCA13-206ENST00000484268 PTPRKQ15262 1439 aa9.26□□□□□ -0.93
ABCA13-206ENST00000484268 RRP9O43818 475 aaKnown RBP9.25□□□□□ -0.93
ABCA13-206ENST00000484268 RRP1P56182 461 aaKnown RBP9.25□□□□□ -0.93
ABCA13-206ENST00000484268 ZNF326Q5BKZ1 582 aaKnown RBP9.25□□□□□ -0.93
ABCA13-206ENST00000484268 NBPF8Q3BBV2 869 aa9.25□□□□□ -0.93
ABCA13-206ENST00000484268 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
ABCA13-206ENST00000484268 ARID4BQ4LE39 1312 aaPredicted RBP9.25□□□□□ -0.93
ABCA13-206ENST00000484268 HSP90AA2PQ14568 343 aaPredicted RBP9.25□□□□□ -0.93
ABCA13-206ENST00000484268 PIAS4Q8N2W9 510 aaPredicted RBP9.24□□□□□ -0.93
ABCA13-206ENST00000484268 TMC1Q8TDI8 760 aa9.23□□□□□ -0.93
ABCA13-206ENST00000484268 KIF27Q86VH2 1401 aa9.23□□□□□ -0.93
ABCA13-206ENST00000484268 HFM1A2PYH4 1435 aa9.22□□□□□ -0.93
ABCA13-206ENST00000484268 POGKQ9P215 609 aa9.22□□□□□ -0.93
ABCA13-206ENST00000484268 NAP1L5Q96NT1 182 aaPredicted RBP9.22□□□□□ -0.93
ABCA13-206ENST00000484268 RCAN3Q9UKA8 241 aa9.22□□□□□ -0.93
ABCA13-206ENST00000484268 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
ABCA13-206ENST00000484268 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
ABCA13-206ENST00000484268 HSP90AA1P07900 732 aaKnown RBP9.21□□□□□ -0.93
ABCA13-206ENST00000484268 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.93
ABCA13-206ENST00000484268 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.94
ABCA13-206ENST00000484268 FHOD3Q2V2M9 1422 aa9.2□□□□□ -0.94
ABCA13-206ENST00000484268 PNISRQ8TF01 805 aaKnown RBP9.2□□□□□ -0.94
ABCA13-206ENST00000484268 CRBNQ96SW2 442 aa9.2□□□□□ -0.94
ABCA13-206ENST00000484268 PCF11O94913 1555 aaKnown RBP9.19□□□□□ -0.94
ABCA13-206ENST00000484268 NAIPQ13075 1403 aa9.18□□□□□ -0.94
ABCA13-206ENST00000484268 RGS3P49796 1198 aa9.18□□□□□ -0.94
ABCA13-206ENST00000484268 DHX29Q7Z478 1369 aaKnown RBP9.18□□□□□ -0.94
ABCA13-206ENST00000484268 L1TD1Q5T7N2 865 aaKnown RBP9.18□□□□□ -0.94
ABCA13-206ENST00000484268 C20orf194Q5TEA3 1177 aa9.18□□□□□ -0.94
ABCA13-206ENST00000484268 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
ABCA13-206ENST00000484268 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
ABCA13-206ENST00000484268 CLCN1P35523 988 aa9.17□□□□□ -0.94
ABCA13-206ENST00000484268 SLKQ9H2G2 1235 aaPredicted RBP9.17□□□□□ -0.94
ABCA13-206ENST00000484268 CUX1P39880 1505 aa9.17□□□□□ -0.94
ABCA13-206ENST00000484268 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
ABCA13-206ENST00000484268 PRDM2Q13029 1718 aa9.16□□□□□ -0.94
ABCA13-206ENST00000484268 SPATA31E1Q6ZUB1 1445 aa9.16□□□□□ -0.94
ABCA13-206ENST00000484268 ARID3CA6NKF2 412 aa9.16□□□□□ -0.94
ABCA13-206ENST00000484268 MPHOSPH9Q99550 1183 aa9.16□□□□□ -0.94
ABCA13-206ENST00000484268 POLR1AO95602 1720 aaPredicted RBP9.15□□□□□ -0.94
ABCA13-206ENST00000484268 GZF1Q9H116 711 aaPredicted RBP9.15□□□□□ -0.94
ABCA13-206ENST00000484268 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.95
ABCA13-206ENST00000484268 DENND4BO75064 1496 aaPredicted RBP9.14□□□□□ -0.95
ABCA13-206ENST00000484268 IGF1RP08069 1367 aa9.14□□□□□ -0.95
ABCA13-206ENST00000484268 PANK2Q9BZ23 570 aa9.14□□□□□ -0.95
ABCA13-206ENST00000484268 LRPPRCP42704 1394 aaKnown RBP9.13□□□□□ -0.95
ABCA13-206ENST00000484268 FAM161AQ3B820 660 aa9.13□□□□□ -0.95
ABCA13-206ENST00000484268 CARMIL1Q5VZK9 1371 aa9.13□□□□□ -0.95
ABCA13-206ENST00000484268 C8orf34Q49A92 452 aa9.13□□□□□ -0.95
ABCA13-206ENST00000484268 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
ABCA13-206ENST00000484268 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
ABCA13-206ENST00000484268 KDM6BO15054 1643 aa9.11□□□□□ -0.95
ABCA13-206ENST00000484268 PDE3BQ13370 1112 aa9.11□□□□□ -0.95
ABCA13-206ENST00000484268 KDM2BQ8NHM5 1336 aa9.11□□□□□ -0.95
ABCA13-206ENST00000484268 CENPJQ9HC77 1338 aaPredicted RBP9.11□□□□□ -0.95
ABCA13-206ENST00000484268 XRCC6P12956 609 aaKnown RBP eCLIP9.1□□□□□ -0.95
ABCA13-206ENST00000484268 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
ABCA13-206ENST00000484268 HECW1Q76N89 1606 aa9.1□□□□□ -0.95
ABCA13-206ENST00000484268 FYCO1Q9BQS8 1478 aa9.1□□□□□ -0.95
ABCA13-206ENST00000484268 A0A0U1RQG5 324 aaPredicted RBP9.09□□□□□ -0.95
ABCA13-206ENST00000484268 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
ABCA13-206ENST00000484268 RBM10P98175 930 aaKnown RBP9.09□□□□□ -0.95
ABCA13-206ENST00000484268 MYOM3Q5VTT5 1437 aa9.09□□□□□ -0.96
ABCA13-206ENST00000484268 MIA2Q96PC5 1412 aa9.09□□□□□ -0.96
ABCA13-206ENST00000484268 FSD2A1L4K1 749 aa9.08□□□□□ -0.96
ABCA13-206ENST00000484268 CALD1Q05682 793 aaKnown RBP9.08□□□□□ -0.96
ABCA13-206ENST00000484268 PDCL3Q9H2J4 239 aa9.08□□□□□ -0.96
ABCA13-206ENST00000484268 CASKIN1Q8WXD9 1431 aa9.08□□□□□ -0.96
ABCA13-206ENST00000484268 GOLGA6L3A6NEY3 463 aa9.08□□□□□ -0.96
ABCA13-206ENST00000484268 SEC24BO95487 1268 aa9.08□□□□□ -0.96
ABCA13-206ENST00000484268 CENPQQ7L2Z9 268 aaPredicted RBP9.08□□□□□ -0.96
ABCA13-206ENST00000484268 BRD4O60885 1362 aaPredicted RBP9.07□□□□□ -0.96
ABCA13-206ENST00000484268 PRDM4Q9UKN5 801 aa9.07□□□□□ -0.96
ABCA13-206ENST00000484268 USP47Q96K76 1375 aa9.07□□□□□ -0.96
ABCA13-206ENST00000484268 CFTRP13569 1480 aa9.07□□□□□ -0.96
ABCA13-206ENST00000484268 TEX14Q8IWB6 1497 aa9.06□□□□□ -0.96
ABCA13-206ENST00000484268 TPM2P07951 284 aa9.06□□□□□ -0.96
ABCA13-206ENST00000484268 AAMPQ13685 434 aa9.06□□□□□ -0.96
ABCA13-206ENST00000484268 BCORL1Q5H9F3 1711 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms