RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
ABCA13-206ENST00000484268 AEBP2Q6ZN18 517 aaPredicted RBP12.64□□□□□ -0.39
ABCA13-206ENST00000484268 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
ABCA13-206ENST00000484268 HRCP23327 699 aa11.96□□□□□ -0.5
ABCA13-206ENST00000484268 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
ABCA13-206ENST00000484268 PPARGC1BQ86YN6 1023 aaKnown RBP11.88□□□□□ -0.51
ABCA13-206ENST00000484268 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
ABCA13-206ENST00000484268 SHROOM4Q9ULL8 1493 aa11.66□□□□□ -0.54
ABCA13-206ENST00000484268 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
ABCA13-206ENST00000484268 MYT1Q01538 1121 aa11.53□□□□□ -0.56
ABCA13-206ENST00000484268 MYO15BQ96JP2 1530 aa11.5□□□□□ -0.57
ABCA13-206ENST00000484268 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
ABCA13-206ENST00000484268 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
ABCA13-206ENST00000484268 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.6
ABCA13-206ENST00000484268 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
ABCA13-206ENST00000484268 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
ABCA13-206ENST00000484268 TRIM26Q12899 539 aaPredicted RBP11.16□□□□□ -0.62
ABCA13-206ENST00000484268 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
ABCA13-206ENST00000484268 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
ABCA13-206ENST00000484268 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
ABCA13-206ENST00000484268 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
ABCA13-206ENST00000484268 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
ABCA13-206ENST00000484268 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
ABCA13-206ENST00000484268 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
ABCA13-206ENST00000484268 TTBK1Q5TCY1 1321 aaPredicted RBP10.9□□□□□ -0.66
ABCA13-206ENST00000484268 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
ABCA13-206ENST00000484268 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
ABCA13-206ENST00000484268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
ABCA13-206ENST00000484268 YTHDC1Q96MU7 727 aaKnown RBP10.83□□□□□ -0.68
ABCA13-206ENST00000484268 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
ABCA13-206ENST00000484268 ZCCHC6Q5VYS8 1495 aaKnown RBP10.76□□□□□ -0.69
ABCA13-206ENST00000484268 CCER1Q8TC90 406 aaPredicted RBP10.76□□□□□ -0.69
ABCA13-206ENST00000484268 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
ABCA13-206ENST00000484268 TRIM41Q8WV44 630 aa10.63□□□□□ -0.71
ABCA13-206ENST00000484268 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
ABCA13-206ENST00000484268 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
ABCA13-206ENST00000484268 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
ABCA13-206ENST00000484268 MIER1Q8N108 512 aa10.56□□□□□ -0.72
ABCA13-206ENST00000484268 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
ABCA13-206ENST00000484268 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
ABCA13-206ENST00000484268 CLSPNQ9HAW4 1339 aa10.44□□□□□ -0.74
ABCA13-206ENST00000484268 TSHZ2Q9NRE2 1034 aa10.44□□□□□ -0.74
ABCA13-206ENST00000484268 SENP3Q9H4L4 574 aaPredicted RBP10.43□□□□□ -0.74
ABCA13-206ENST00000484268 SUPT16HQ9Y5B9 1047 aaKnown RBP10.41□□□□□ -0.74
ABCA13-206ENST00000484268 BCANQ96GW7 911 aa10.36□□□□□ -0.75
ABCA13-206ENST00000484268 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
ABCA13-206ENST00000484268 RB1CC1Q8TDY2 1594 aa10.28□□□□□ -0.76
ABCA13-206ENST00000484268 ABCC9O60706 1549 aa10.26□□□□□ -0.77
ABCA13-206ENST00000484268 RSF1Q96T23 1441 aaPredicted RBP10.25□□□□□ -0.77
ABCA13-206ENST00000484268 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
ABCA13-206ENST00000484268 WRNQ14191 1432 aaPredicted RBP eCLIP10.23□□□□□ -0.77
ABCA13-206ENST00000484268 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
ABCA13-206ENST00000484268 ITGAEP38570 1179 aa10.18□□□□□ -0.78
ABCA13-206ENST00000484268 NACADO15069 1562 aa10.17□□□□□ -0.78
ABCA13-206ENST00000484268 APLP2Q06481 763 aa10.17□□□□□ -0.78
ABCA13-206ENST00000484268 FKBP8Q14318 412 aa10.16□□□□□ -0.78
ABCA13-206ENST00000484268 RBM19Q9Y4C8 960 aaKnown RBP10.16□□□□□ -0.78
ABCA13-206ENST00000484268 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
ABCA13-206ENST00000484268 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
ABCA13-206ENST00000484268 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
ABCA13-206ENST00000484268 MSH5O43196 834 aa10.11□□□□□ -0.79
ABCA13-206ENST00000484268 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
ABCA13-206ENST00000484268 ADRA2BP18089 450 aa10.07□□□□□ -0.8
ABCA13-206ENST00000484268 SCRIBQ14160 1630 aa10.06□□□□□ -0.8
ABCA13-206ENST00000484268 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
ABCA13-206ENST00000484268 TNIKQ9UKE5 1360 aa10.02□□□□□ -0.81
ABCA13-206ENST00000484268 FANCIQ9NVI1 1328 aa10.02□□□□□ -0.81
ABCA13-206ENST00000484268 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
ABCA13-206ENST00000484268 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
ABCA13-206ENST00000484268 SOGA1O94964 1423 aa10□□□□□ -0.81
ABCA13-206ENST00000484268 ABCC8Q09428 1581 aa10□□□□□ -0.81
ABCA13-206ENST00000484268 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
ABCA13-206ENST00000484268 KCNA4P22459 653 aa9.99□□□□□ -0.81
ABCA13-206ENST00000484268 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
ABCA13-206ENST00000484268 CECR2Q9BXF3 1484 aa9.99□□□□□ -0.81
ABCA13-206ENST00000484268 NEFLP07196 543 aa9.98□□□□□ -0.81
ABCA13-206ENST00000484268 DEKP35659 375 aaKnown RBP9.98□□□□□ -0.81
ABCA13-206ENST00000484268 UNC13AQ9UPW8 1703 aa9.98□□□□□ -0.81
ABCA13-206ENST00000484268 RUSC2Q8N2Y8 1516 aa9.97□□□□□ -0.81
ABCA13-206ENST00000484268 DDX10Q13206 875 aaKnown RBP9.95□□□□□ -0.82
ABCA13-206ENST00000484268 HIRIP3Q9BW71 556 aaPredicted RBP9.94□□□□□ -0.82
ABCA13-206ENST00000484268 CCDC136Q96JN2 1154 aa9.93□□□□□ -0.82
ABCA13-206ENST00000484268 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
ABCA13-206ENST00000484268 MROH2BQ7Z745 1585 aa9.93□□□□□ -0.82
ABCA13-206ENST00000484268 NBR1Q14596 966 aa9.92□□□□□ -0.82
ABCA13-206ENST00000484268 WIZO95785 1651 aa9.92□□□□□ -0.82
ABCA13-206ENST00000484268 DHX57Q6P158 1386 aaKnown RBP9.91□□□□□ -0.82
ABCA13-206ENST00000484268 ERICH6BQ5W0A0 696 aa9.91□□□□□ -0.82
ABCA13-206ENST00000484268 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
ABCA13-206ENST00000484268 PPP6R1Q9UPN7 881 aa9.89□□□□□ -0.83
ABCA13-206ENST00000484268 RTN4Q9NQC3 1192 aaKnown RBP9.87□□□□□ -0.83
ABCA13-206ENST00000484268 CDK11AQ9UQ88 783 aaPredicted RBP9.87□□□□□ -0.83
ABCA13-206ENST00000484268 EEA1Q15075 1411 aa9.86□□□□□ -0.83
ABCA13-206ENST00000484268 GOLGA3Q08378 1498 aa9.84□□□□□ -0.83
ABCA13-206ENST00000484268 BICRAQ9NZM4 1560 aa9.84□□□□□ -0.83
ABCA13-206ENST00000484268 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.84□□□□□ -0.83
ABCA13-206ENST00000484268 UBE2Q2Q8WVN8 375 aa9.83□□□□□ -0.84
ABCA13-206ENST00000484268 EIF5BO60841 1220 aaKnown RBP9.82□□□□□ -0.84
ABCA13-206ENST00000484268 CLIP1P30622 1438 aa9.82□□□□□ -0.84
ABCA13-206ENST00000484268 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms