RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
COL8A1-207ENST00000483969 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
COL8A1-207ENST00000483969 CUX2O14529 1486 aa15.68■□□□□ 0.1
COL8A1-207ENST00000483969 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
COL8A1-207ENST00000483969 SNPHO15079 494 aa15.64■□□□□ 0.09
COL8A1-207ENST00000483969 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
COL8A1-207ENST00000483969 ST18O60284 1047 aa15.6■□□□□ 0.09
COL8A1-207ENST00000483969 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
COL8A1-207ENST00000483969 G3V3G9 751 aa15.57■□□□□ 0.08
COL8A1-207ENST00000483969 TMEM121BQ9BXQ6 578 aaPredicted RBP15.57■□□□□ 0.08
COL8A1-207ENST00000483969 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
COL8A1-207ENST00000483969 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
COL8A1-207ENST00000483969 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
COL8A1-207ENST00000483969 RNF25Q96BH1 459 aaPredicted RBP15.53■□□□□ 0.08
COL8A1-207ENST00000483969 BOLA1Q9Y3E2 137 aa15.53■□□□□ 0.08
COL8A1-207ENST00000483969 WDR62O43379 1518 aa15.52■□□□□ 0.07
COL8A1-207ENST00000483969 DPY19L2Q6NUT2 758 aa15.51■□□□□ 0.07
COL8A1-207ENST00000483969 EFCAB3Q8N7B9 438 aa15.51■□□□□ 0.07
COL8A1-207ENST00000483969 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
COL8A1-207ENST00000483969 URB2Q14146 1524 aaKnown RBP15.49■□□□□ 0.07
COL8A1-207ENST00000483969 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.47■□□□□ 0.07
COL8A1-207ENST00000483969 ZFP91Q96JP5 570 aaPredicted RBP15.47■□□□□ 0.07
COL8A1-207ENST00000483969 TAOK2Q9UL54 1235 aa15.46■□□□□ 0.07
COL8A1-207ENST00000483969 CDAN1Q8IWY9 1227 aa15.45■□□□□ 0.06
COL8A1-207ENST00000483969 SOX12O15370 315 aa15.42■□□□□ 0.06
COL8A1-207ENST00000483969 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
COL8A1-207ENST00000483969 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
COL8A1-207ENST00000483969 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
COL8A1-207ENST00000483969 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
COL8A1-207ENST00000483969 MARVELD3Q96A59 401 aa15.34■□□□□ 0.05
COL8A1-207ENST00000483969 SOGA1O94964 1423 aa15.33■□□□□ 0.04
COL8A1-207ENST00000483969 ECM2O94769 699 aaPredicted RBP15.32■□□□□ 0.04
COL8A1-207ENST00000483969 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
COL8A1-207ENST00000483969 EMP3P54852 163 aa15.31■□□□□ 0.04
COL8A1-207ENST00000483969 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
COL8A1-207ENST00000483969 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
COL8A1-207ENST00000483969 CUX1P39880 1505 aa15.29■□□□□ 0.04
COL8A1-207ENST00000483969 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
COL8A1-207ENST00000483969 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
COL8A1-207ENST00000483969 MS4A4AQ96JQ5 239 aa15.29■□□□□ 0.04
COL8A1-207ENST00000483969 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.03
COL8A1-207ENST00000483969 NLRP6P59044 892 aa15.26■□□□□ 0.03
COL8A1-207ENST00000483969 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
COL8A1-207ENST00000483969 STK24Q9Y6E0 443 aa15.26■□□□□ 0.03
COL8A1-207ENST00000483969 HOXB3P14651 431 aaPredicted RBP15.25■□□□□ 0.03
COL8A1-207ENST00000483969 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
COL8A1-207ENST00000483969 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
COL8A1-207ENST00000483969 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
COL8A1-207ENST00000483969 STK25O00506 426 aa15.23■□□□□ 0.03
COL8A1-207ENST00000483969 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
COL8A1-207ENST00000483969 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
COL8A1-207ENST00000483969 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL8A1-207ENST00000483969 PKD2Q13563 968 aa15.21■□□□□ 0.03
COL8A1-207ENST00000483969 RIMBP2O15034 1052 aa15.19■□□□□ 0.02
COL8A1-207ENST00000483969 FBXO22Q8NEZ5 403 aa15.19■□□□□ 0.02
COL8A1-207ENST00000483969 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
COL8A1-207ENST00000483969 HS3ST6Q96QI5 342 aa15.18■□□□□ 0.02
COL8A1-207ENST00000483969 TMEM92Q6UXU6 159 aa15.17■□□□□ 0.02
COL8A1-207ENST00000483969 FAM205CA6NFA0 338 aa15.16■□□□□ 0.02
COL8A1-207ENST00000483969 RGL2O15211 777 aa15.16■□□□□ 0.02
COL8A1-207ENST00000483969 HOXB1P14653 301 aaPredicted RBP15.16■□□□□ 0.02
COL8A1-207ENST00000483969 TOP2BQ02880 1626 aa15.15■□□□□ 0.02
COL8A1-207ENST00000483969 MFRPQ9BY79 579 aa15.14■□□□□ 0.01
COL8A1-207ENST00000483969 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
COL8A1-207ENST00000483969 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
COL8A1-207ENST00000483969 ZSWIM6Q9HCJ5 1215 aa15.12■□□□□ 0.01
COL8A1-207ENST00000483969 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
COL8A1-207ENST00000483969 GRIN2BQ13224 1484 aa15.1■□□□□ 0.01
COL8A1-207ENST00000483969 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
COL8A1-207ENST00000483969 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
COL8A1-207ENST00000483969 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
COL8A1-207ENST00000483969 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
COL8A1-207ENST00000483969 POTEB3A0JP26 581 aa15.07■□□□□ 0
COL8A1-207ENST00000483969 POTEBQ6S5H4 581 aa15.07■□□□□ 0
COL8A1-207ENST00000483969 SPNS2Q8IVW8 549 aa15.07■□□□□ 0
COL8A1-207ENST00000483969 ERBB3P21860 1342 aa15.03■□□□□ -0
COL8A1-207ENST00000483969 KRTAP3-3Q9BYR6 98 aa15.03■□□□□ -0
COL8A1-207ENST00000483969 KRTAP3-2Q9BYR7 98 aa15.03■□□□□ -0
COL8A1-207ENST00000483969 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
COL8A1-207ENST00000483969 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
COL8A1-207ENST00000483969 MMRN1Q13201 1228 aa15.02■□□□□ -0
COL8A1-207ENST00000483969 KIF27Q86VH2 1401 aa15□□□□□ -0.01
COL8A1-207ENST00000483969 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
COL8A1-207ENST00000483969 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
COL8A1-207ENST00000483969 GPR153Q6NV75 609 aa14.96□□□□□ -0.01
COL8A1-207ENST00000483969 IGF1RP08069 1367 aa14.96□□□□□ -0.02
COL8A1-207ENST00000483969 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
COL8A1-207ENST00000483969 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
COL8A1-207ENST00000483969 KIF3CO14782 793 aa14.94□□□□□ -0.02
COL8A1-207ENST00000483969 VARS2Q5ST30 1063 aaKnown RBP14.94□□□□□ -0.02
COL8A1-207ENST00000483969 HS6ST3Q8IZP7 471 aa14.93□□□□□ -0.02
COL8A1-207ENST00000483969 C2orf72A6NCS6 295 aa14.91□□□□□ -0.02
COL8A1-207ENST00000483969 TMC2Q8TDI7 906 aa14.88□□□□□ -0.03
COL8A1-207ENST00000483969 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
COL8A1-207ENST00000483969 ARSIQ5FYB1 569 aa14.87□□□□□ -0.03
COL8A1-207ENST00000483969 GRIN2AQ12879 1464 aa14.87□□□□□ -0.03
COL8A1-207ENST00000483969 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
COL8A1-207ENST00000483969 ZNF687Q8N1G0 1237 aa14.85□□□□□ -0.03
COL8A1-207ENST00000483969 ADAMTS12P58397 1594 aa14.83□□□□□ -0.04
COL8A1-207ENST00000483969 PPP1R37O75864 691 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms