RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 ABCB7O75027 752 aa10.24□□□□□ -0.77
PKP4-211ENST00000481115 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
PKP4-211ENST00000481115 FGD5Q6ZNL6 1462 aa10.23□□□□□ -0.77
PKP4-211ENST00000481115 NUBP1P53384 320 aa10.22□□□□□ -0.77
PKP4-211ENST00000481115 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
PKP4-211ENST00000481115 UBE2Q2Q8WVN8 375 aa10.22□□□□□ -0.77
PKP4-211ENST00000481115 FANCIQ9NVI1 1328 aa10.22□□□□□ -0.77
PKP4-211ENST00000481115 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
PKP4-211ENST00000481115 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
PKP4-211ENST00000481115 TARBP1Q13395 1621 aaKnown RBP10.21□□□□□ -0.78
PKP4-211ENST00000481115 BCL11BQ9C0K0 894 aaPredicted RBP10.2□□□□□ -0.78
PKP4-211ENST00000481115 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
PKP4-211ENST00000481115 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
PKP4-211ENST00000481115 IFT140Q96RY7 1462 aa10.19□□□□□ -0.78
PKP4-211ENST00000481115 CHRM1P11229 460 aaPredicted RBP10.18□□□□□ -0.78
PKP4-211ENST00000481115 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
PKP4-211ENST00000481115 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
PKP4-211ENST00000481115 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
PKP4-211ENST00000481115 SOGA1O94964 1423 aa10.16□□□□□ -0.78
PKP4-211ENST00000481115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.15□□□□□ -0.78
PKP4-211ENST00000481115 ZFP91Q96JP5 570 aaPredicted RBP10.15□□□□□ -0.78
PKP4-211ENST00000481115 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
PKP4-211ENST00000481115 ABCA10Q8WWZ4 1543 aa10.15□□□□□ -0.78
PKP4-211ENST00000481115 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
PKP4-211ENST00000481115 CADPS2Q86UW7 1296 aa10.13□□□□□ -0.79
PKP4-211ENST00000481115 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
PKP4-211ENST00000481115 EIF4G3O43432 1585 aaKnown RBP10.12□□□□□ -0.79
PKP4-211ENST00000481115 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
PKP4-211ENST00000481115 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
PKP4-211ENST00000481115 RBM19Q9Y4C8 960 aaKnown RBP10.11□□□□□ -0.79
PKP4-211ENST00000481115 YTHDC1Q96MU7 727 aaKnown RBP10.09□□□□□ -0.79
PKP4-211ENST00000481115 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
PKP4-211ENST00000481115 ZMYND10O75800 440 aa10.08□□□□□ -0.8
PKP4-211ENST00000481115 AQRO60306 1485 aaKnown RBP eCLIP10.08□□□□□ -0.81e-6■■□□□ 11.4
PKP4-211ENST00000481115 PBRM1Q86U86 1689 aa10.08□□□□□ -0.8
PKP4-211ENST00000481115 TDRD9Q8NDG6 1382 aaKnown RBP10.07□□□□□ -0.8
PKP4-211ENST00000481115 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
PKP4-211ENST00000481115 GRIN2BQ13224 1484 aa10.04□□□□□ -0.8
PKP4-211ENST00000481115 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
PKP4-211ENST00000481115 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
PKP4-211ENST00000481115 SEMA3EO15041 775 aa10.03□□□□□ -0.8
PKP4-211ENST00000481115 E2F4Q16254 413 aa10.01□□□□□ -0.81
PKP4-211ENST00000481115 MAGI1Q96QZ7 1491 aaPredicted RBP10.01□□□□□ -0.81
PKP4-211ENST00000481115 RUSC2Q8N2Y8 1516 aa10.01□□□□□ -0.81
PKP4-211ENST00000481115 SNAPC4Q5SXM2 1469 aa10□□□□□ -0.81
PKP4-211ENST00000481115 SMYD5Q6GMV2 418 aa10□□□□□ -0.81
PKP4-211ENST00000481115 BARGINQ6ZT62 677 aa10□□□□□ -0.81
PKP4-211ENST00000481115 ADAMTS12P58397 1594 aa10□□□□□ -0.81
PKP4-211ENST00000481115 EIF5BO60841 1220 aaKnown RBP9.99□□□□□ -0.81
PKP4-211ENST00000481115 NEFLP07196 543 aa9.99□□□□□ -0.81
PKP4-211ENST00000481115 DEKP35659 375 aaKnown RBP9.99□□□□□ -0.81
PKP4-211ENST00000481115 CUL7Q14999 1698 aa9.99□□□□□ -0.81
PKP4-211ENST00000481115 IGF1RP08069 1367 aa9.99□□□□□ -0.81
PKP4-211ENST00000481115 EEA1Q15075 1411 aa9.98□□□□□ -0.81
PKP4-211ENST00000481115 CHD1O14646 1710 aa9.97□□□□□ -0.81
PKP4-211ENST00000481115 AK7Q96M32 723 aa9.97□□□□□ -0.81
PKP4-211ENST00000481115 ARID3AQ99856 593 aa9.97□□□□□ -0.81
PKP4-211ENST00000481115 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
PKP4-211ENST00000481115 FHAD1B1AJZ9 1412 aa9.96□□□□□ -0.82
PKP4-211ENST00000481115 DSG3P32926 999 aa9.95□□□□□ -0.82
PKP4-211ENST00000481115 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
PKP4-211ENST00000481115 GPBP1L1Q9HC44 474 aaPredicted RBP9.94□□□□□ -0.82
PKP4-211ENST00000481115 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
PKP4-211ENST00000481115 PYGBP11216 843 aa9.93□□□□□ -0.82
PKP4-211ENST00000481115 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
PKP4-211ENST00000481115 GRIN2AQ12879 1464 aa9.92□□□□□ -0.82
PKP4-211ENST00000481115 PRXQ9BXM0 1461 aa9.92□□□□□ -0.82
PKP4-211ENST00000481115 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
PKP4-211ENST00000481115 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
PKP4-211ENST00000481115 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
PKP4-211ENST00000481115 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
PKP4-211ENST00000481115 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
PKP4-211ENST00000481115 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
PKP4-211ENST00000481115 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
PKP4-211ENST00000481115 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
PKP4-211ENST00000481115 KIF21BO75037 1637 aa9.89□□□□□ -0.83
PKP4-211ENST00000481115 PDIA4P13667 645 aaKnown RBP9.89□□□□□ -0.83
PKP4-211ENST00000481115 MNX1P50219 401 aaPredicted RBP9.89□□□□□ -0.83
PKP4-211ENST00000481115 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
PKP4-211ENST00000481115 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
PKP4-211ENST00000481115 NUP160Q12769 1436 aa9.89□□□□□ -0.83
PKP4-211ENST00000481115 CEP170Q5SW79 1584 aa9.88□□□□□ -0.83
PKP4-211ENST00000481115 GLIPR1L2Q4G1C9 344 aa9.87□□□□□ -0.83
PKP4-211ENST00000481115 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
PKP4-211ENST00000481115 USP35Q9P2H5 1018 aa9.87□□□□□ -0.83
PKP4-211ENST00000481115 CLASP1Q7Z460 1538 aa9.87□□□□□ -0.83
PKP4-211ENST00000481115 CCER2I3L3R5 266 aa9.86□□□□□ -0.83
PKP4-211ENST00000481115 KRI1Q8N9T8 703 aaKnown RBP9.86□□□□□ -0.83
PKP4-211ENST00000481115 APBB1O00213 710 aa9.85□□□□□ -0.83
PKP4-211ENST00000481115 MFRPQ9BY79 579 aa9.85□□□□□ -0.83
PKP4-211ENST00000481115 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
PKP4-211ENST00000481115 CTTNBP2Q8WZ74 1663 aa9.83□□□□□ -0.84
PKP4-211ENST00000481115 CEP162Q5TB80 1403 aa9.83□□□□□ -0.84
PKP4-211ENST00000481115 MKRN3Q13064 507 aaKnown RBP9.83□□□□□ -0.84
PKP4-211ENST00000481115 PDAP1Q13442 181 aaKnown RBP9.83□□□□□ -0.84
PKP4-211ENST00000481115 ARIH1Q9Y4X5 557 aaPredicted RBP9.83□□□□□ -0.84
PKP4-211ENST00000481115 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
PKP4-211ENST00000481115 SALL2Q9Y467 1007 aaPredicted RBP9.82□□□□□ -0.84
PKP4-211ENST00000481115 SHROOM2Q13796 1616 aa9.82□□□□□ -0.84
PKP4-211ENST00000481115 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms