RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
PKP4-211ENST00000481115 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
PKP4-211ENST00000481115 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
PKP4-211ENST00000481115 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
PKP4-211ENST00000481115 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
PKP4-211ENST00000481115 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
PKP4-211ENST00000481115 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
PKP4-211ENST00000481115 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
PKP4-211ENST00000481115 KCNA4P22459 653 aa13.98□□□□□ -0.17
PKP4-211ENST00000481115 ADRA2BP18089 450 aa13.74□□□□□ -0.21
PKP4-211ENST00000481115 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
PKP4-211ENST00000481115 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
PKP4-211ENST00000481115 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
PKP4-211ENST00000481115 FOXD1Q16676 465 aa13.43□□□□□ -0.26
PKP4-211ENST00000481115 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
PKP4-211ENST00000481115 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
PKP4-211ENST00000481115 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
PKP4-211ENST00000481115 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
PKP4-211ENST00000481115 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
PKP4-211ENST00000481115 ZBTB22O15209 634 aa12.87□□□□□ -0.35
PKP4-211ENST00000481115 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
PKP4-211ENST00000481115 MSH5O43196 834 aa12.86□□□□□ -0.35
PKP4-211ENST00000481115 CCDC180Q9P1Z9 1646 aa12.65□□□□□ -0.38
PKP4-211ENST00000481115 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
PKP4-211ENST00000481115 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
PKP4-211ENST00000481115 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
PKP4-211ENST00000481115 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
PKP4-211ENST00000481115 MYT1Q01538 1121 aa12.4□□□□□ -0.42
PKP4-211ENST00000481115 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
PKP4-211ENST00000481115 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
PKP4-211ENST00000481115 FKBP8Q14318 412 aa12.28□□□□□ -0.44
PKP4-211ENST00000481115 ABCC9O60706 1549 aa12.11□□□□□ -0.47
PKP4-211ENST00000481115 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
PKP4-211ENST00000481115 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
PKP4-211ENST00000481115 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
PKP4-211ENST00000481115 ZCCHC6Q5VYS8 1495 aaKnown RBP11.93□□□□□ -0.5
PKP4-211ENST00000481115 HRCP23327 699 aa11.92□□□□□ -0.5
PKP4-211ENST00000481115 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
PKP4-211ENST00000481115 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
PKP4-211ENST00000481115 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
PKP4-211ENST00000481115 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PKP4-211ENST00000481115 BCANQ96GW7 911 aa11.87□□□□□ -0.51
PKP4-211ENST00000481115 DCAF1Q9Y4B6 1507 aa11.85□□□□□ -0.51
PKP4-211ENST00000481115 MYO15BQ96JP2 1530 aa11.84□□□□□ -0.51
PKP4-211ENST00000481115 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
PKP4-211ENST00000481115 NACADO15069 1562 aa11.83□□□□□ -0.52
PKP4-211ENST00000481115 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
PKP4-211ENST00000481115 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
PKP4-211ENST00000481115 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
PKP4-211ENST00000481115 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
PKP4-211ENST00000481115 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
PKP4-211ENST00000481115 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
PKP4-211ENST00000481115 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
PKP4-211ENST00000481115 FBXO3Q9UK99 471 aa11.59□□□□□ -0.55
PKP4-211ENST00000481115 UNC13AQ9UPW8 1703 aa11.57□□□□□ -0.56
PKP4-211ENST00000481115 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
PKP4-211ENST00000481115 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.57
PKP4-211ENST00000481115 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
PKP4-211ENST00000481115 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
PKP4-211ENST00000481115 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
PKP4-211ENST00000481115 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
PKP4-211ENST00000481115 ZEB1P37275 1124 aaPredicted RBP11.39□□□□□ -0.59
PKP4-211ENST00000481115 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
PKP4-211ENST00000481115 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
PKP4-211ENST00000481115 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
PKP4-211ENST00000481115 PKD2Q13563 968 aa11.33□□□□□ -0.6
PKP4-211ENST00000481115 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
PKP4-211ENST00000481115 PABPN1Q86U42 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
PKP4-211ENST00000481115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
PKP4-211ENST00000481115 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
PKP4-211ENST00000481115 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
PKP4-211ENST00000481115 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
PKP4-211ENST00000481115 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
PKP4-211ENST00000481115 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
PKP4-211ENST00000481115 FBLN2P98095 1184 aa11.29□□□□□ -0.6
PKP4-211ENST00000481115 PROM2Q8N271 834 aa11.27□□□□□ -0.61
PKP4-211ENST00000481115 ARXQ96QS3 562 aa11.27□□□□□ -0.61
PKP4-211ENST00000481115 TIMELESSQ9UNS1 1208 aa11.27□□□□□ -0.61
PKP4-211ENST00000481115 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
PKP4-211ENST00000481115 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
PKP4-211ENST00000481115 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
PKP4-211ENST00000481115 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
PKP4-211ENST00000481115 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
PKP4-211ENST00000481115 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.62
PKP4-211ENST00000481115 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
PKP4-211ENST00000481115 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
PKP4-211ENST00000481115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.636e-10■■□□□ 12.4
PKP4-211ENST00000481115 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
PKP4-211ENST00000481115 EIF4G1Q04637 1599 aaKnown RBP11.11□□□□□ -0.63
PKP4-211ENST00000481115 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
PKP4-211ENST00000481115 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
PKP4-211ENST00000481115 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
PKP4-211ENST00000481115 ECM2O94769 699 aaPredicted RBP11.08□□□□□ -0.64
PKP4-211ENST00000481115 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
PKP4-211ENST00000481115 CECR2Q9BXF3 1484 aa11.07□□□□□ -0.64
PKP4-211ENST00000481115 NBR1Q14596 966 aa11.07□□□□□ -0.64
PKP4-211ENST00000481115 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
PKP4-211ENST00000481115 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
PKP4-211ENST00000481115 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
PKP4-211ENST00000481115 SMARCA4P51532 1647 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms