RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HSP90AA1P07900 732 aaKnown RBP18.82■□□□□ 0.6
COL20A1-206ENST00000479501 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
COL20A1-206ENST00000479501 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
COL20A1-206ENST00000479501 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
COL20A1-206ENST00000479501 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
COL20A1-206ENST00000479501 B4GALNT3Q6L9W6 998 aa18.81■□□□□ 0.6
COL20A1-206ENST00000479501 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
COL20A1-206ENST00000479501 PTPRGP23470 1445 aa18.8■□□□□ 0.6
COL20A1-206ENST00000479501 ARXQ96QS3 562 aa18.79■□□□□ 0.6
COL20A1-206ENST00000479501 GGT6Q6P531 493 aa18.78■□□□□ 0.6
COL20A1-206ENST00000479501 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
COL20A1-206ENST00000479501 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
COL20A1-206ENST00000479501 UACAQ9BZF9 1416 aa18.77■□□□□ 0.6
COL20A1-206ENST00000479501 NEUROD2Q15784 382 aa18.77■□□□□ 0.6
COL20A1-206ENST00000479501 NCOA2Q15596 1464 aa18.77■□□□□ 0.59
COL20A1-206ENST00000479501 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
COL20A1-206ENST00000479501 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
COL20A1-206ENST00000479501 POGKQ9P215 609 aa18.75■□□□□ 0.59
COL20A1-206ENST00000479501 RALBP1Q15311 655 aa18.74■□□□□ 0.59
COL20A1-206ENST00000479501 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
COL20A1-206ENST00000479501 KIF3BO15066 747 aa18.74■□□□□ 0.59
COL20A1-206ENST00000479501 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
COL20A1-206ENST00000479501 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
COL20A1-206ENST00000479501 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
COL20A1-206ENST00000479501 PPM1GO15355 546 aaPredicted RBP18.7■□□□□ 0.58
COL20A1-206ENST00000479501 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
COL20A1-206ENST00000479501 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
COL20A1-206ENST00000479501 NUDCQ9Y266 331 aa18.69■□□□□ 0.58
COL20A1-206ENST00000479501 ERICH6BQ5W0A0 696 aa18.69■□□□□ 0.58
COL20A1-206ENST00000479501 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
COL20A1-206ENST00000479501 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
COL20A1-206ENST00000479501 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
COL20A1-206ENST00000479501 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
COL20A1-206ENST00000479501 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
COL20A1-206ENST00000479501 MORC1Q86VD1 984 aa18.64■□□□□ 0.57
COL20A1-206ENST00000479501 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
COL20A1-206ENST00000479501 NLRP13Q86W25 1043 aa18.64■□□□□ 0.57
COL20A1-206ENST00000479501 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
COL20A1-206ENST00000479501 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL20A1-206ENST00000479501 RTN4Q9NQC3 1192 aaKnown RBP18.62■□□□□ 0.57
COL20A1-206ENST00000479501 USP47Q96K76 1375 aa18.62■□□□□ 0.57
COL20A1-206ENST00000479501 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
COL20A1-206ENST00000479501 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
COL20A1-206ENST00000479501 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
COL20A1-206ENST00000479501 RBM19Q9Y4C8 960 aaKnown RBP18.61■□□□□ 0.57
COL20A1-206ENST00000479501 MRC2Q9UBG0 1479 aa18.61■□□□□ 0.57
COL20A1-206ENST00000479501 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
COL20A1-206ENST00000479501 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
COL20A1-206ENST00000479501 FTSJ3Q8IY81 847 aaKnown RBP18.6■□□□□ 0.57
COL20A1-206ENST00000479501 MLECQ14165 292 aa18.59■□□□□ 0.57
COL20A1-206ENST00000479501 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
COL20A1-206ENST00000479501 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
COL20A1-206ENST00000479501 KIF15Q9NS87 1388 aa18.58■□□□□ 0.56
COL20A1-206ENST00000479501 STK26Q9P289 416 aa18.57■□□□□ 0.56
COL20A1-206ENST00000479501 RGS3P49796 1198 aa18.57■□□□□ 0.56
COL20A1-206ENST00000479501 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
COL20A1-206ENST00000479501 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
COL20A1-206ENST00000479501 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
COL20A1-206ENST00000479501 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
COL20A1-206ENST00000479501 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
COL20A1-206ENST00000479501 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
COL20A1-206ENST00000479501 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
COL20A1-206ENST00000479501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
COL20A1-206ENST00000479501 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
COL20A1-206ENST00000479501 LAS1LQ9Y4W2 734 aaKnown RBP18.54■□□□□ 0.56
COL20A1-206ENST00000479501 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
COL20A1-206ENST00000479501 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
COL20A1-206ENST00000479501 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
COL20A1-206ENST00000479501 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
COL20A1-206ENST00000479501 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
COL20A1-206ENST00000479501 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
COL20A1-206ENST00000479501 BECN1Q14457 450 aa18.53■□□□□ 0.56
COL20A1-206ENST00000479501 PANK3Q9H999 370 aa18.52■□□□□ 0.56
COL20A1-206ENST00000479501 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
COL20A1-206ENST00000479501 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
COL20A1-206ENST00000479501 TRIM44Q96DX7 344 aaPredicted RBP18.5■□□□□ 0.55
COL20A1-206ENST00000479501 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
COL20A1-206ENST00000479501 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
COL20A1-206ENST00000479501 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
COL20A1-206ENST00000479501 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
COL20A1-206ENST00000479501 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
COL20A1-206ENST00000479501 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
COL20A1-206ENST00000479501 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
COL20A1-206ENST00000479501 MS4A1P11836 297 aa18.48■□□□□ 0.55
COL20A1-206ENST00000479501 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
COL20A1-206ENST00000479501 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
COL20A1-206ENST00000479501 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
COL20A1-206ENST00000479501 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
COL20A1-206ENST00000479501 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
COL20A1-206ENST00000479501 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
COL20A1-206ENST00000479501 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL20A1-206ENST00000479501 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
COL20A1-206ENST00000479501 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
COL20A1-206ENST00000479501 NAIPQ13075 1403 aa18.45■□□□□ 0.54
COL20A1-206ENST00000479501 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
COL20A1-206ENST00000479501 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
COL20A1-206ENST00000479501 CNTLNQ9NXG0 1405 aa18.44■□□□□ 0.54
COL20A1-206ENST00000479501 KIAA0586Q9BVV6 1533 aa18.44■□□□□ 0.54
COL20A1-206ENST00000479501 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
COL20A1-206ENST00000479501 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms