RNA–Protein interactions for RNA: ENST00000478975.1

SFRP4-203, Transcript of secreted frizzled related protein 4, humanhuman

TSL 2

Gene SFRP4, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP4-203ENST00000478975 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
SFRP4-203ENST00000478975 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
SFRP4-203ENST00000478975 IRX5P78411 483 aaPredicted RBP12.54□□□□□ -0.4
SFRP4-203ENST00000478975 IFNLR1Q8IU57 520 aaPredicted RBP12.54□□□□□ -0.4
SFRP4-203ENST00000478975 OCEL1Q9H607 264 aa12.54□□□□□ -0.4
SFRP4-203ENST00000478975 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
SFRP4-203ENST00000478975 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
SFRP4-203ENST00000478975 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.41
SFRP4-203ENST00000478975 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
SFRP4-203ENST00000478975 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
SFRP4-203ENST00000478975 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
SFRP4-203ENST00000478975 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
SFRP4-203ENST00000478975 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
SFRP4-203ENST00000478975 PSEN1P49768 467 aa12.47□□□□□ -0.41
SFRP4-203ENST00000478975 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
SFRP4-203ENST00000478975 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
SFRP4-203ENST00000478975 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
SFRP4-203ENST00000478975 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
SFRP4-203ENST00000478975 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
SFRP4-203ENST00000478975 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
SFRP4-203ENST00000478975 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
SFRP4-203ENST00000478975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
SFRP4-203ENST00000478975 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
SFRP4-203ENST00000478975 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
SFRP4-203ENST00000478975 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
SFRP4-203ENST00000478975 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
SFRP4-203ENST00000478975 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
SFRP4-203ENST00000478975 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
SFRP4-203ENST00000478975 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
SFRP4-203ENST00000478975 SOGA1O94964 1423 aa12.34□□□□□ -0.43
SFRP4-203ENST00000478975 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
SFRP4-203ENST00000478975 SNPHO15079 494 aa12.32□□□□□ -0.44
SFRP4-203ENST00000478975 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
SFRP4-203ENST00000478975 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
SFRP4-203ENST00000478975 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
SFRP4-203ENST00000478975 ST18O60284 1047 aa12.3□□□□□ -0.44
SFRP4-203ENST00000478975 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
SFRP4-203ENST00000478975 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
SFRP4-203ENST00000478975 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
SFRP4-203ENST00000478975 SYNJ2O15056 1496 aa12.27□□□□□ -0.44
SFRP4-203ENST00000478975 GRIN2BQ13224 1484 aa12.27□□□□□ -0.44
SFRP4-203ENST00000478975 G3V3G9 751 aa12.25□□□□□ -0.45
SFRP4-203ENST00000478975 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
SFRP4-203ENST00000478975 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
SFRP4-203ENST00000478975 CUX1P39880 1505 aa12.22□□□□□ -0.45
SFRP4-203ENST00000478975 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
SFRP4-203ENST00000478975 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
SFRP4-203ENST00000478975 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
SFRP4-203ENST00000478975 KIF13AQ9H1H9 1805 aa12.17□□□□□ -0.46
SFRP4-203ENST00000478975 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
SFRP4-203ENST00000478975 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
SFRP4-203ENST00000478975 EFCAB3Q8N7B9 438 aa12.15□□□□□ -0.46
SFRP4-203ENST00000478975 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.47
SFRP4-203ENST00000478975 CEP170Q5SW79 1584 aa12.13□□□□□ -0.47
SFRP4-203ENST00000478975 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
SFRP4-203ENST00000478975 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
SFRP4-203ENST00000478975 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
SFRP4-203ENST00000478975 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
SFRP4-203ENST00000478975 ADAMTS12P58397 1594 aa12.09□□□□□ -0.47
SFRP4-203ENST00000478975 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
SFRP4-203ENST00000478975 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
SFRP4-203ENST00000478975 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
SFRP4-203ENST00000478975 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
SFRP4-203ENST00000478975 NUP160Q12769 1436 aa12.06□□□□□ -0.48
SFRP4-203ENST00000478975 SOX12O15370 315 aa12.06□□□□□ -0.48
SFRP4-203ENST00000478975 EMP3P54852 163 aa12.06□□□□□ -0.48
SFRP4-203ENST00000478975 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
SFRP4-203ENST00000478975 TSPOAP1O95153 1857 aa12.02□□□□□ -0.49
SFRP4-203ENST00000478975 FAM69CQ0P6D2 419 aa12.01□□□□□ -0.49
SFRP4-203ENST00000478975 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
SFRP4-203ENST00000478975 PRG4Q92954 1404 aaPredicted RBP12.01□□□□□ -0.49
SFRP4-203ENST00000478975 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
SFRP4-203ENST00000478975 KDM6BO15054 1643 aa12□□□□□ -0.49
SFRP4-203ENST00000478975 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
SFRP4-203ENST00000478975 DIP2BQ9P265 1576 aa11.98□□□□□ -0.49
SFRP4-203ENST00000478975 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
SFRP4-203ENST00000478975 MICALL2Q8IY33 904 aa11.98□□□□□ -0.49
SFRP4-203ENST00000478975 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
SFRP4-203ENST00000478975 FAM205CA6NFA0 338 aa11.97□□□□□ -0.49
SFRP4-203ENST00000478975 DOK7Q18PE1 504 aa11.97□□□□□ -0.49
SFRP4-203ENST00000478975 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
SFRP4-203ENST00000478975 HOXB3P14651 431 aaPredicted RBP11.96□□□□□ -0.49
SFRP4-203ENST00000478975 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.5
SFRP4-203ENST00000478975 MAPKBP1O60336 1514 aa11.96□□□□□ -0.5
SFRP4-203ENST00000478975 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.5
SFRP4-203ENST00000478975 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
SFRP4-203ENST00000478975 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
SFRP4-203ENST00000478975 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
SFRP4-203ENST00000478975 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
SFRP4-203ENST00000478975 ECM2O94769 699 aaPredicted RBP11.94□□□□□ -0.5
SFRP4-203ENST00000478975 NLRP6P59044 892 aa11.94□□□□□ -0.5
SFRP4-203ENST00000478975 JPH4Q96JJ6 628 aa11.94□□□□□ -0.5
SFRP4-203ENST00000478975 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
SFRP4-203ENST00000478975 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
SFRP4-203ENST00000478975 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
SFRP4-203ENST00000478975 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SFRP4-203ENST00000478975 SPNS2Q8IVW8 549 aa11.92□□□□□ -0.5
SFRP4-203ENST00000478975 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
SFRP4-203ENST00000478975 STK25O00506 426 aa11.89□□□□□ -0.51
SFRP4-203ENST00000478975 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms