RNA–Protein interactions for RNA: ENST00000478975.1

SFRP4-203, Transcript of secreted frizzled related protein 4, humanhuman

TSL 2

Gene SFRP4, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP4-203ENST00000478975 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
SFRP4-203ENST00000478975 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
SFRP4-203ENST00000478975 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
SFRP4-203ENST00000478975 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
SFRP4-203ENST00000478975 FOXD1Q16676 465 aa21.26■□□□□ 0.99
SFRP4-203ENST00000478975 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
SFRP4-203ENST00000478975 MSH5O43196 834 aa19.96■□□□□ 0.79
SFRP4-203ENST00000478975 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
SFRP4-203ENST00000478975 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
SFRP4-203ENST00000478975 ADRA2BP18089 450 aa19.84■□□□□ 0.77
SFRP4-203ENST00000478975 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
SFRP4-203ENST00000478975 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
SFRP4-203ENST00000478975 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
SFRP4-203ENST00000478975 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
SFRP4-203ENST00000478975 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
SFRP4-203ENST00000478975 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
SFRP4-203ENST00000478975 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
SFRP4-203ENST00000478975 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
SFRP4-203ENST00000478975 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.36
SFRP4-203ENST00000478975 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
SFRP4-203ENST00000478975 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
SFRP4-203ENST00000478975 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
SFRP4-203ENST00000478975 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
SFRP4-203ENST00000478975 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
SFRP4-203ENST00000478975 NISCHQ9Y2I1 1504 aa16.83■□□□□ 0.28
SFRP4-203ENST00000478975 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
SFRP4-203ENST00000478975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
SFRP4-203ENST00000478975 KCNA4P22459 653 aa16.56■□□□□ 0.24
SFRP4-203ENST00000478975 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
SFRP4-203ENST00000478975 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
SFRP4-203ENST00000478975 CAPN15O75808 1086 aa16.07■□□□□ 0.16
SFRP4-203ENST00000478975 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
SFRP4-203ENST00000478975 APLP2Q06481 763 aa15.93■□□□□ 0.14
SFRP4-203ENST00000478975 DSG3P32926 999 aa15.91■□□□□ 0.14
SFRP4-203ENST00000478975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
SFRP4-203ENST00000478975 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
SFRP4-203ENST00000478975 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
SFRP4-203ENST00000478975 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
SFRP4-203ENST00000478975 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
SFRP4-203ENST00000478975 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
SFRP4-203ENST00000478975 ABCB7O75027 752 aa15.66■□□□□ 0.1
SFRP4-203ENST00000478975 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
SFRP4-203ENST00000478975 ABCC9O60706 1549 aa15.63■□□□□ 0.09
SFRP4-203ENST00000478975 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
SFRP4-203ENST00000478975 POLA2Q14181 598 aa15.37■□□□□ 0.05
SFRP4-203ENST00000478975 CCDC180Q9P1Z9 1646 aa15.3■□□□□ 0.04
SFRP4-203ENST00000478975 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
SFRP4-203ENST00000478975 POTEHQ6S545 545 aa15.23■□□□□ 0.03
SFRP4-203ENST00000478975 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
SFRP4-203ENST00000478975 ZBTB22O15209 634 aa15.18■□□□□ 0.02
SFRP4-203ENST00000478975 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
SFRP4-203ENST00000478975 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
SFRP4-203ENST00000478975 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
SFRP4-203ENST00000478975 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
SFRP4-203ENST00000478975 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
SFRP4-203ENST00000478975 FBLN2P98095 1184 aa14.75□□□□□ -0.05
SFRP4-203ENST00000478975 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
SFRP4-203ENST00000478975 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
SFRP4-203ENST00000478975 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
SFRP4-203ENST00000478975 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
SFRP4-203ENST00000478975 SPDYE2Q495Y8 402 aa14.6□□□□□ -0.07
SFRP4-203ENST00000478975 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
SFRP4-203ENST00000478975 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
SFRP4-203ENST00000478975 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
SFRP4-203ENST00000478975 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
SFRP4-203ENST00000478975 NACADO15069 1562 aa14.51□□□□□ -0.09
SFRP4-203ENST00000478975 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
SFRP4-203ENST00000478975 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
SFRP4-203ENST00000478975 UNC13AQ9UPW8 1703 aa14.45□□□□□ -0.1
SFRP4-203ENST00000478975 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
SFRP4-203ENST00000478975 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.1
SFRP4-203ENST00000478975 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
SFRP4-203ENST00000478975 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
SFRP4-203ENST00000478975 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
SFRP4-203ENST00000478975 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
SFRP4-203ENST00000478975 HAX1O00165 279 aa14.3□□□□□ -0.12
SFRP4-203ENST00000478975 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
SFRP4-203ENST00000478975 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
SFRP4-203ENST00000478975 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
SFRP4-203ENST00000478975 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
SFRP4-203ENST00000478975 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
SFRP4-203ENST00000478975 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
SFRP4-203ENST00000478975 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
SFRP4-203ENST00000478975 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
SFRP4-203ENST00000478975 EVX2Q03828 476 aa14.02□□□□□ -0.17
SFRP4-203ENST00000478975 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
SFRP4-203ENST00000478975 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
SFRP4-203ENST00000478975 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
SFRP4-203ENST00000478975 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
SFRP4-203ENST00000478975 DNAJC5Q9H3Z4 198 aa13.92□□□□□ -0.18
SFRP4-203ENST00000478975 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
SFRP4-203ENST00000478975 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
SFRP4-203ENST00000478975 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
SFRP4-203ENST00000478975 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
SFRP4-203ENST00000478975 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
SFRP4-203ENST00000478975 GABBR2O75899 941 aa13.76□□□□□ -0.21
SFRP4-203ENST00000478975 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
SFRP4-203ENST00000478975 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
SFRP4-203ENST00000478975 CLCN6P51797 869 aa13.6□□□□□ -0.23
SFRP4-203ENST00000478975 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms