RNA–Protein interactions for RNA: ENST00000475128.5

RBM5-218, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 1,371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-218	ENST00000475128	PCDHB13	Q9Y5F0	798 aa		13.8	□□□□□ -0.2
RBM5-218	ENST00000475128	CHD1	O14646	1710 aa		13.78	□□□□□ -0.2
RBM5-218	ENST00000475128	MMRN1	Q13201	1228 aa		13.77	□□□□□ -0.21
RBM5-218	ENST00000475128	FKBP8	Q14318	412 aa		13.77	□□□□□ -0.21
RBM5-218	ENST00000475128	PBRM1	Q86U86	1689 aa		13.76	□□□□□ -0.21
RBM5-218	ENST00000475128	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM5-218	ENST00000475128	SNAPC4	Q5SXM2	1469 aa		13.75	□□□□□ -0.21
RBM5-218	ENST00000475128	ABCA10	Q8WWZ4	1543 aa		13.75	□□□□□ -0.21
RBM5-218	ENST00000475128	SPNS2	Q8IVW8	549 aa		13.74	□□□□□ -0.21
RBM5-218	ENST00000475128	GRIN2B	Q13224	1484 aa		13.74	□□□□□ -0.21
RBM5-218	ENST00000475128	ABCA5	Q8WWZ7	1642 aa		13.74	□□□□□ -0.21
RBM5-218	ENST00000475128	PLCG2	P16885	1265 aa		13.73	□□□□□ -0.21
RBM5-218	ENST00000475128	GAPVD1	Q14C86	1478 aa		13.73	□□□□□ -0.21
RBM5-218	ENST00000475128	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.71	□□□□□ -0.22
RBM5-218	ENST00000475128	SNPH	O15079	494 aa		13.7	□□□□□ -0.22
RBM5-218	ENST00000475128	IFNL1	Q8IU54	200 aa		13.7	□□□□□ -0.22
RBM5-218	ENST00000475128	TMEM106C	Q9BVX2	250 aa		13.7	□□□□□ -0.22
RBM5-218	ENST00000475128	IRX5	P78411	483 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM5-218	ENST00000475128	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM5-218	ENST00000475128	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM5-218	ENST00000475128	SYNJ2	O15056	1496 aa		13.65	□□□□□ -0.22
RBM5-218	ENST00000475128	NUBP1	P53384	320 aa		13.65	□□□□□ -0.22
RBM5-218	ENST00000475128	PLCD3	Q8N3E9	789 aa		13.64	□□□□□ -0.23
RBM5-218	ENST00000475128	OCEL1	Q9H607	264 aa		13.63	□□□□□ -0.23
RBM5-218	ENST00000475128	ADAMTS12	P58397	1594 aa		13.62	□□□□□ -0.23
RBM5-218	ENST00000475128	RIMBP3C	A6NJZ7	1639 aa		13.61	□□□□□ -0.23
RBM5-218	ENST00000475128	RIMBP3B	A6NNM3	1639 aa		13.61	□□□□□ -0.23
RBM5-218	ENST00000475128	RIMBP3	Q9UFD9	1639 aa		13.61	□□□□□ -0.23
RBM5-218	ENST00000475128	TRIM41	Q8WV44	630 aa		13.6	□□□□□ -0.23
RBM5-218	ENST00000475128	ERICH3	Q5RHP9	1530 aa		13.59	□□□□□ -0.23
RBM5-218	ENST00000475128	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.58	□□□□□ -0.23
RBM5-218	ENST00000475128	ARHGEF11	O15085	1522 aa		13.58	□□□□□ -0.24
RBM5-218	ENST00000475128	FAM212A	Q96EL1	285 aa		13.58	□□□□□ -0.24
RBM5-218	ENST00000475128	GRIN2A	Q12879	1464 aa		13.57	□□□□□ -0.24
RBM5-218	ENST00000475128	CLASP1	Q7Z460	1538 aa		13.57	□□□□□ -0.24
RBM5-218	ENST00000475128	FHAD1	B1AJZ9	1412 aa		13.57	□□□□□ -0.24
RBM5-218	ENST00000475128	KIF27	Q86VH2	1401 aa		13.56	□□□□□ -0.24
RBM5-218	ENST00000475128	MARVELD3	Q96A59	401 aa		13.53	□□□□□ -0.24
RBM5-218	ENST00000475128	CEP170	Q5SW79	1584 aa		13.52	□□□□□ -0.25
RBM5-218	ENST00000475128	CUL7	Q14999	1698 aa		13.5	□□□□□ -0.25
RBM5-218	ENST00000475128	NUP160	Q12769	1436 aa		13.47	□□□□□ -0.25
RBM5-218	ENST00000475128	ARAP1	Q96P48	1450 aa		13.47	□□□□□ -0.25
RBM5-218	ENST00000475128	IGF1R	P08069	1367 aa		13.47	□□□□□ -0.25
RBM5-218	ENST00000475128	CYB5RL	Q6IPT4	315 aa		13.45	□□□□□ -0.26
RBM5-218	ENST00000475128	RUSC2	Q8N2Y8	1516 aa		13.43	□□□□□ -0.26
RBM5-218	ENST00000475128	CARMIL1	Q5VZK9	1371 aa		13.41	□□□□□ -0.26
RBM5-218	ENST00000475128	EMP3	P54852	163 aa		13.41	□□□□□ -0.26
RBM5-218	ENST00000475128	SHROOM2	Q13796	1616 aa		13.4	□□□□□ -0.26
RBM5-218	ENST00000475128	ERCC6L2	Q5T890	1561 aa		13.4	□□□□□ -0.26
RBM5-218	ENST00000475128	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.38	□□□□□ -0.27
RBM5-218	ENST00000475128	KRTAP3-3	Q9BYR6	98 aa		13.37	□□□□□ -0.27
RBM5-218	ENST00000475128	KRTAP3-2	Q9BYR7	98 aa		13.37	□□□□□ -0.27
RBM5-218	ENST00000475128	DCAF8	Q5TAQ9	597 aa		13.36	□□□□□ -0.27
RBM5-218	ENST00000475128	C3orf67	Q6ZVT6	689 aa		13.36	□□□□□ -0.27
RBM5-218	ENST00000475128	PRG4	Q92954	1404 aa	Predicted RBP	13.36	□□□□□ -0.27
RBM5-218	ENST00000475128	PDCD7	Q8N8D1	485 aa	Known RBP	13.35	□□□□□ -0.27
RBM5-218	ENST00000475128	PYGB	P11216	843 aa		13.34	□□□□□ -0.27
RBM5-218	ENST00000475128	HS3ST6	Q96QI5	342 aa		13.34	□□□□□ -0.27
RBM5-218	ENST00000475128	KIAA0586	Q9BVV6	1533 aa		13.34	□□□□□ -0.27
RBM5-218	ENST00000475128	RAPGEF2	Q9Y4G8	1499 aa		13.34	□□□□□ -0.27
RBM5-218	ENST00000475128	JPH4	Q96JJ6	628 aa		13.33	□□□□□ -0.27
RBM5-218	ENST00000475128	PCDHB8	Q9UN66	801 aa		13.33	□□□□□ -0.27
RBM5-218	ENST00000475128	POTEB3	A0JP26	581 aa		13.32	□□□□□ -0.28
RBM5-218	ENST00000475128	POTEB	Q6S5H4	581 aa		13.32	□□□□□ -0.28
RBM5-218	ENST00000475128	FAM205C	A6NFA0	338 aa		13.31	□□□□□ -0.28
RBM5-218	ENST00000475128	IQGAP2	Q13576	1575 aa		13.3	□□□□□ -0.28
RBM5-218	ENST00000475128	MKRN3	Q13064	507 aa	Known RBP	13.28	□□□□□ -0.28
RBM5-218	ENST00000475128	CTTNBP2	Q8WZ74	1663 aa		13.27	□□□□□ -0.29
RBM5-218	ENST00000475128	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.27	□□□□□ -0.29
RBM5-218	ENST00000475128	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.26	□□□□□ -0.29
RBM5-218	ENST00000475128	GOLGA2	Q08379	1002 aa		13.25	□□□□□ -0.29
RBM5-218	ENST00000475128	PRX	Q9BXM0	1461 aa		13.25	□□□□□ -0.29
RBM5-218	ENST00000475128	EEA1	Q15075	1411 aa		13.24	□□□□□ -0.29
RBM5-218	ENST00000475128	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM5-218	ENST00000475128	CARMIL2	Q6F5E8	1435 aa		13.22	□□□□□ -0.29
RBM5-218	ENST00000475128	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	1e-10	■□□□□ 10.4
RBM5-218	ENST00000475128	UGGT2	Q9NYU1	1516 aa		13.19	□□□□□ -0.3
RBM5-218	ENST00000475128	KIAA0556	O60303	1618 aa		13.18	□□□□□ -0.3
RBM5-218	ENST00000475128	TNIK	Q9UKE5	1360 aa		13.18	□□□□□ -0.3
RBM5-218	ENST00000475128	PTPRG	P23470	1445 aa		13.18	□□□□□ -0.3
RBM5-218	ENST00000475128	DISP1	Q96F81	1524 aa		13.17	□□□□□ -0.3
RBM5-218	ENST00000475128	ADCY10	Q96PN6	1610 aa		13.17	□□□□□ -0.3
RBM5-218	ENST00000475128	ILDR1	Q86SU0	546 aa	Predicted RBP	13.17	□□□□□ -0.3
RBM5-218	ENST00000475128	FBXO3	Q9UK99	471 aa		13.16	□□□□□ -0.3
RBM5-218	ENST00000475128	KIF21B	O75037	1637 aa		13.14	□□□□□ -0.31
RBM5-218	ENST00000475128	CHRM1	P11229	460 aa	Predicted RBP	13.14	□□□□□ -0.31
RBM5-218	ENST00000475128	GSE1	Q14687	1217 aa		13.14	□□□□□ -0.31
RBM5-218	ENST00000475128	GOLGA3	Q08378	1498 aa		13.14	□□□□□ -0.31
RBM5-218	ENST00000475128	RANGAP1	P46060	587 aa	Predicted RBP	13.11	□□□□□ -0.31
RBM5-218	ENST00000475128	HOXB3	P14651	431 aa	Predicted RBP	13.1	□□□□□ -0.31
RBM5-218	ENST00000475128	HOXB1	P14653	301 aa	Predicted RBP	13.1	□□□□□ -0.31
RBM5-218	ENST00000475128	PSEN1	P49768	467 aa		13.1	□□□□□ -0.31
RBM5-218	ENST00000475128	UACA	Q9BZF9	1416 aa		13.08	□□□□□ -0.31
RBM5-218	ENST00000475128	ABCC2	Q92887	1545 aa		13.08	□□□□□ -0.32
RBM5-218	ENST00000475128	P3H3	Q8IVL6	736 aa		13.07	□□□□□ -0.32
RBM5-218	ENST00000475128	MAPKBP1	O60336	1514 aa		13.07	□□□□□ -0.32
RBM5-218	ENST00000475128	KIF13A	Q9H1H9	1805 aa		13.07	□□□□□ -0.32
RBM5-218	ENST00000475128	UBTF	P17480	764 aa	Known RBP	13.06	□□□□□ -0.32
RBM5-218	ENST00000475128	ZNF710	Q8N1W2	664 aa		13.06	□□□□□ -0.32
RBM5-218	ENST00000475128	RNF166	Q96A37	237 aa	Predicted RBP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms