RNA–Protein interactions for RNA: ENST00000475008.1

KCNT1-205, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 2

Gene KCNT1, Length 3,999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-205ENST00000475008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
KCNT1-205ENST00000475008 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
KCNT1-205ENST00000475008 RGS3P49796 1198 aa17.09■□□□□ 0.33
KCNT1-205ENST00000475008 PKD2Q13563 968 aa17.08■□□□□ 0.32
KCNT1-205ENST00000475008 CFDP1Q9UEE9 299 aaPredicted RBP17.07■□□□□ 0.32
KCNT1-205ENST00000475008 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
KCNT1-205ENST00000475008 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
KCNT1-205ENST00000475008 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
KCNT1-205ENST00000475008 PDE4AP27815 886 aa17.05■□□□□ 0.32
KCNT1-205ENST00000475008 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
KCNT1-205ENST00000475008 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
KCNT1-205ENST00000475008 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
KCNT1-205ENST00000475008 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
KCNT1-205ENST00000475008 PTPRKQ15262 1439 aa17.03■□□□□ 0.32
KCNT1-205ENST00000475008 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
KCNT1-205ENST00000475008 NAIPQ13075 1403 aa17.03■□□□□ 0.32
KCNT1-205ENST00000475008 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
KCNT1-205ENST00000475008 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.31
KCNT1-205ENST00000475008 NCOA2Q15596 1464 aa17.02■□□□□ 0.31
KCNT1-205ENST00000475008 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
KCNT1-205ENST00000475008 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
KCNT1-205ENST00000475008 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
KCNT1-205ENST00000475008 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
KCNT1-205ENST00000475008 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
KCNT1-205ENST00000475008 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
KCNT1-205ENST00000475008 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
KCNT1-205ENST00000475008 USP47Q96K76 1375 aa16.97■□□□□ 0.31
KCNT1-205ENST00000475008 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
KCNT1-205ENST00000475008 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
KCNT1-205ENST00000475008 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
KCNT1-205ENST00000475008 CDCA7LQ96GN5 454 aa16.96■□□□□ 0.31
KCNT1-205ENST00000475008 FYCO1Q9BQS8 1478 aa16.95■□□□□ 0.3
KCNT1-205ENST00000475008 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
KCNT1-205ENST00000475008 CRBNQ96SW2 442 aa16.92■□□□□ 0.3
KCNT1-205ENST00000475008 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
KCNT1-205ENST00000475008 PNISRQ8TF01 805 aaKnown RBP16.91■□□□□ 0.3
KCNT1-205ENST00000475008 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
KCNT1-205ENST00000475008 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
KCNT1-205ENST00000475008 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
KCNT1-205ENST00000475008 NUP155O75694 1391 aa16.88■□□□□ 0.29
KCNT1-205ENST00000475008 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
KCNT1-205ENST00000475008 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
KCNT1-205ENST00000475008 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
KCNT1-205ENST00000475008 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
KCNT1-205ENST00000475008 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
KCNT1-205ENST00000475008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.86■□□□□ 0.29
KCNT1-205ENST00000475008 RALBP1Q15311 655 aa16.86■□□□□ 0.29
KCNT1-205ENST00000475008 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
KCNT1-205ENST00000475008 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
KCNT1-205ENST00000475008 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
KCNT1-205ENST00000475008 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
KCNT1-205ENST00000475008 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
KCNT1-205ENST00000475008 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
KCNT1-205ENST00000475008 SLKQ9H2G2 1235 aaPredicted RBP16.84■□□□□ 0.29
KCNT1-205ENST00000475008 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
KCNT1-205ENST00000475008 KIF15Q9NS87 1388 aa16.83■□□□□ 0.29
KCNT1-205ENST00000475008 GSE1Q14687 1217 aa16.83■□□□□ 0.28
KCNT1-205ENST00000475008 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
KCNT1-205ENST00000475008 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
KCNT1-205ENST00000475008 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
KCNT1-205ENST00000475008 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
KCNT1-205ENST00000475008 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
KCNT1-205ENST00000475008 CCDC146Q8IYE0 955 aa16.8■□□□□ 0.28
KCNT1-205ENST00000475008 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
KCNT1-205ENST00000475008 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
KCNT1-205ENST00000475008 PANK3Q9H999 370 aa16.78■□□□□ 0.28
KCNT1-205ENST00000475008 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
KCNT1-205ENST00000475008 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
KCNT1-205ENST00000475008 UPF2Q9HAU5 1272 aaKnown RBP16.78■□□□□ 0.28
KCNT1-205ENST00000475008 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
KCNT1-205ENST00000475008 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.27
KCNT1-205ENST00000475008 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.27
KCNT1-205ENST00000475008 HNRNPMP52272 730 aaKnown RBP eCLIP16.76■□□□□ 0.27
KCNT1-205ENST00000475008 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
KCNT1-205ENST00000475008 MS4A1P11836 297 aa16.75■□□□□ 0.27
KCNT1-205ENST00000475008 C20orf194Q5TEA3 1177 aa16.74■□□□□ 0.27
KCNT1-205ENST00000475008 GZF1Q9H116 711 aaPredicted RBP16.74■□□□□ 0.27
KCNT1-205ENST00000475008 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
KCNT1-205ENST00000475008 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
KCNT1-205ENST00000475008 TMF1P82094 1093 aa16.73■□□□□ 0.27
KCNT1-205ENST00000475008 NBPF1Q3BBV0 1214 aa16.72■□□□□ 0.27
KCNT1-205ENST00000475008 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
KCNT1-205ENST00000475008 BECN1Q14457 450 aa16.71■□□□□ 0.27
KCNT1-205ENST00000475008 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
KCNT1-205ENST00000475008 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
KCNT1-205ENST00000475008 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
KCNT1-205ENST00000475008 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
KCNT1-205ENST00000475008 GOLGA2Q08379 1002 aa16.69■□□□□ 0.26
KCNT1-205ENST00000475008 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
KCNT1-205ENST00000475008 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
KCNT1-205ENST00000475008 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
KCNT1-205ENST00000475008 NAP1L5Q96NT1 182 aaPredicted RBP16.67■□□□□ 0.26
KCNT1-205ENST00000475008 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
KCNT1-205ENST00000475008 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
KCNT1-205ENST00000475008 RPRD2Q5VT52 1461 aaKnown RBP16.66■□□□□ 0.26
KCNT1-205ENST00000475008 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
KCNT1-205ENST00000475008 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
KCNT1-205ENST00000475008 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
KCNT1-205ENST00000475008 DAPK1P53355 1430 aa16.64■□□□□ 0.25
KCNT1-205ENST00000475008 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms