RNA–Protein interactions for RNA: ENST00000475008.1

KCNT1-205, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 2

Gene KCNT1, Length 3,999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-205ENST00000475008 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
KCNT1-205ENST00000475008 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
KCNT1-205ENST00000475008 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
KCNT1-205ENST00000475008 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
KCNT1-205ENST00000475008 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
KCNT1-205ENST00000475008 HRCP23327 699 aa21.12■□□□□ 0.97
KCNT1-205ENST00000475008 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
KCNT1-205ENST00000475008 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
KCNT1-205ENST00000475008 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
KCNT1-205ENST00000475008 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
KCNT1-205ENST00000475008 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
KCNT1-205ENST00000475008 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
KCNT1-205ENST00000475008 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.86
KCNT1-205ENST00000475008 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
KCNT1-205ENST00000475008 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
KCNT1-205ENST00000475008 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
KCNT1-205ENST00000475008 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
KCNT1-205ENST00000475008 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
KCNT1-205ENST00000475008 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
KCNT1-205ENST00000475008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
KCNT1-205ENST00000475008 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
KCNT1-205ENST00000475008 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
KCNT1-205ENST00000475008 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
KCNT1-205ENST00000475008 CCDC180Q9P1Z9 1646 aa19.81■□□□□ 0.76
KCNT1-205ENST00000475008 CENPBP07199 599 aaPredicted RBP19.8■□□□□ 0.76
KCNT1-205ENST00000475008 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
KCNT1-205ENST00000475008 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
KCNT1-205ENST00000475008 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
KCNT1-205ENST00000475008 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
KCNT1-205ENST00000475008 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
KCNT1-205ENST00000475008 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
KCNT1-205ENST00000475008 ABCC9O60706 1549 aa19.48■□□□□ 0.71
KCNT1-205ENST00000475008 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
KCNT1-205ENST00000475008 APLP2Q06481 763 aa19.33■□□□□ 0.68
KCNT1-205ENST00000475008 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
KCNT1-205ENST00000475008 MYT1Q01538 1121 aa19.24■□□□□ 0.67
KCNT1-205ENST00000475008 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
KCNT1-205ENST00000475008 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
KCNT1-205ENST00000475008 MIER1Q8N108 512 aa19.04■□□□□ 0.64
KCNT1-205ENST00000475008 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
KCNT1-205ENST00000475008 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
KCNT1-205ENST00000475008 ITGAEP38570 1179 aa18.97■□□□□ 0.63
KCNT1-205ENST00000475008 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
KCNT1-205ENST00000475008 BCANQ96GW7 911 aa18.88■□□□□ 0.61
KCNT1-205ENST00000475008 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
KCNT1-205ENST00000475008 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
KCNT1-205ENST00000475008 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
KCNT1-205ENST00000475008 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
KCNT1-205ENST00000475008 NACADO15069 1562 aa18.67■□□□□ 0.58
KCNT1-205ENST00000475008 NEFLP07196 543 aa18.67■□□□□ 0.58
KCNT1-205ENST00000475008 SOGA1O94964 1423 aa18.63■□□□□ 0.57
KCNT1-205ENST00000475008 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
KCNT1-205ENST00000475008 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
KCNT1-205ENST00000475008 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
KCNT1-205ENST00000475008 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
KCNT1-205ENST00000475008 WIZO95785 1651 aa18.52■□□□□ 0.56
KCNT1-205ENST00000475008 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.55
KCNT1-205ENST00000475008 FKBP8Q14318 412 aa18.5■□□□□ 0.55
KCNT1-205ENST00000475008 CLIP1P30622 1438 aa18.45■□□□□ 0.54
KCNT1-205ENST00000475008 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
KCNT1-205ENST00000475008 HIRIP3Q9BW71 556 aaPredicted RBP18.44■□□□□ 0.54
KCNT1-205ENST00000475008 FAM50AQ14320 339 aaKnown RBP18.42■□□□□ 0.54
KCNT1-205ENST00000475008 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
KCNT1-205ENST00000475008 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
KCNT1-205ENST00000475008 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
KCNT1-205ENST00000475008 CNGB1Q14028 1251 aaPredicted RBP18.37■□□□□ 0.53
KCNT1-205ENST00000475008 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
KCNT1-205ENST00000475008 KCNH8Q96L42 1107 aa18.33■□□□□ 0.53
KCNT1-205ENST00000475008 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.52
KCNT1-205ENST00000475008 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
KCNT1-205ENST00000475008 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
KCNT1-205ENST00000475008 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
KCNT1-205ENST00000475008 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.51
KCNT1-205ENST00000475008 ANP32CO43423 234 aa18.26■□□□□ 0.51
KCNT1-205ENST00000475008 EEA1Q15075 1411 aa18.26■□□□□ 0.51
KCNT1-205ENST00000475008 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
KCNT1-205ENST00000475008 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
KCNT1-205ENST00000475008 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
KCNT1-205ENST00000475008 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
KCNT1-205ENST00000475008 VPS8Q8N3P4 1428 aa18.15■□□□□ 0.5
KCNT1-205ENST00000475008 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
KCNT1-205ENST00000475008 BCL11AQ9H165 835 aa18.13■□□□□ 0.49
KCNT1-205ENST00000475008 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
KCNT1-205ENST00000475008 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
KCNT1-205ENST00000475008 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
KCNT1-205ENST00000475008 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
KCNT1-205ENST00000475008 DHX57Q6P158 1386 aaKnown RBP18.09■□□□□ 0.49
KCNT1-205ENST00000475008 RBM19Q9Y4C8 960 aaKnown RBP18.06■□□□□ 0.48
KCNT1-205ENST00000475008 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
KCNT1-205ENST00000475008 SMARCA2P51531 1590 aa18■□□□□ 0.47
KCNT1-205ENST00000475008 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
KCNT1-205ENST00000475008 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
KCNT1-205ENST00000475008 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
KCNT1-205ENST00000475008 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
KCNT1-205ENST00000475008 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
KCNT1-205ENST00000475008 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
KCNT1-205ENST00000475008 NBR1Q14596 966 aa17.9■□□□□ 0.46
KCNT1-205ENST00000475008 ARID3CA6NKF2 412 aa17.89■□□□□ 0.45
KCNT1-205ENST00000475008 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
KCNT1-205ENST00000475008 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms