RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 SEC24BO95487 1268 aa11.57□□□□□ -0.56
CCDC171-205ENST00000472806 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
CCDC171-205ENST00000472806 IGF1RP08069 1367 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 PDS5BQ9NTI5 1447 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-205ENST00000472806 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 FAM163AQ96GL9 167 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-205ENST00000472806 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
CCDC171-205ENST00000472806 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-205ENST00000472806 CARMIL1Q5VZK9 1371 aa11.54□□□□□ -0.56
CCDC171-205ENST00000472806 ARAP1Q96P48 1450 aa11.52□□□□□ -0.56
CCDC171-205ENST00000472806 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
CCDC171-205ENST00000472806 CUL7Q14999 1698 aa11.51□□□□□ -0.57
CCDC171-205ENST00000472806 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-205ENST00000472806 IER5LQ5T953 404 aa11.49□□□□□ -0.57
CCDC171-205ENST00000472806 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-205ENST00000472806 NESP48681 1621 aa11.49□□□□□ -0.57
CCDC171-205ENST00000472806 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
CCDC171-205ENST00000472806 RANGAP1P46060 587 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-205ENST00000472806 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-205ENST00000472806 MAP3K1Q13233 1512 aa11.46□□□□□ -0.57
CCDC171-205ENST00000472806 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
CCDC171-205ENST00000472806 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
CCDC171-205ENST00000472806 WDR97A6NE52 1622 aa11.44□□□□□ -0.58
CCDC171-205ENST00000472806 EFCAB5A4FU69 1503 aa11.44□□□□□ -0.58
CCDC171-205ENST00000472806 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
CCDC171-205ENST00000472806 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-205ENST00000472806 PLCG2P16885 1265 aa11.41□□□□□ -0.58
CCDC171-205ENST00000472806 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
CCDC171-205ENST00000472806 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.59
CCDC171-205ENST00000472806 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
CCDC171-205ENST00000472806 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
CCDC171-205ENST00000472806 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
CCDC171-205ENST00000472806 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
CCDC171-205ENST00000472806 TIAM1Q13009 1591 aa11.37□□□□□ -0.59
CCDC171-205ENST00000472806 GSE1Q14687 1217 aa11.36□□□□□ -0.59
CCDC171-205ENST00000472806 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
CCDC171-205ENST00000472806 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCDC171-205ENST00000472806 MRC2Q9UBG0 1479 aa11.36□□□□□ -0.59
CCDC171-205ENST00000472806 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
CCDC171-205ENST00000472806 FYCO1Q9BQS8 1478 aa11.34□□□□□ -0.59
CCDC171-205ENST00000472806 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
CCDC171-205ENST00000472806 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
CCDC171-205ENST00000472806 TARBP1Q13395 1621 aaKnown RBP11.32□□□□□ -0.6
CCDC171-205ENST00000472806 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
CCDC171-205ENST00000472806 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-205ENST00000472806 TDRD9Q8NDG6 1382 aaKnown RBP11.31□□□□□ -0.6
CCDC171-205ENST00000472806 ST18O60284 1047 aa11.31□□□□□ -0.6
CCDC171-205ENST00000472806 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-205ENST00000472806 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
CCDC171-205ENST00000472806 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
CCDC171-205ENST00000472806 LRRC9Q6ZRR7 1453 aa11.31□□□□□ -0.6
CCDC171-205ENST00000472806 PSEN1P49768 467 aa11.3□□□□□ -0.6
CCDC171-205ENST00000472806 PCF11O94913 1555 aaKnown RBP11.29□□□□□ -0.6
CCDC171-205ENST00000472806 ZNF467Q7Z7K2 595 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-205ENST00000472806 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-205ENST00000472806 IFT140Q96RY7 1462 aa11.29□□□□□ -0.6
CCDC171-205ENST00000472806 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
CCDC171-205ENST00000472806 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
CCDC171-205ENST00000472806 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
CCDC171-205ENST00000472806 WDR62O43379 1518 aa11.27□□□□□ -0.61
CCDC171-205ENST00000472806 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
CCDC171-205ENST00000472806 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
CCDC171-205ENST00000472806 GRIN2BQ13224 1484 aa11.26□□□□□ -0.61
CCDC171-205ENST00000472806 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
CCDC171-205ENST00000472806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC171-205ENST00000472806 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
CCDC171-205ENST00000472806 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
CCDC171-205ENST00000472806 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
CCDC171-205ENST00000472806 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
CCDC171-205ENST00000472806 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
CCDC171-205ENST00000472806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC171-205ENST00000472806 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
CCDC171-205ENST00000472806 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
CCDC171-205ENST00000472806 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
CCDC171-205ENST00000472806 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
CCDC171-205ENST00000472806 IQGAP2Q13576 1575 aa11.2□□□□□ -0.62
CCDC171-205ENST00000472806 ERCC6Q03468 1493 aa11.2□□□□□ -0.62
CCDC171-205ENST00000472806 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
CCDC171-205ENST00000472806 DHX57Q6P158 1386 aaKnown RBP11.2□□□□□ -0.62
CCDC171-205ENST00000472806 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
CCDC171-205ENST00000472806 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
CCDC171-205ENST00000472806 MTUS2Q5JR59 1369 aa11.18□□□□□ -0.62
CCDC171-205ENST00000472806 PHLDB1Q86UU1 1377 aa11.18□□□□□ -0.62
CCDC171-205ENST00000472806 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
CCDC171-205ENST00000472806 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
CCDC171-205ENST00000472806 HECW1Q76N89 1606 aa11.17□□□□□ -0.62
CCDC171-205ENST00000472806 MARVELD3Q96A59 401 aa11.17□□□□□ -0.62
CCDC171-205ENST00000472806 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
CCDC171-205ENST00000472806 SETD5Q9C0A6 1442 aa11.17□□□□□ -0.62
CCDC171-205ENST00000472806 UGGT2Q9NYU1 1516 aa11.16□□□□□ -0.62
CCDC171-205ENST00000472806 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-205ENST00000472806 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
CCDC171-205ENST00000472806 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.63
CCDC171-205ENST00000472806 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-205ENST00000472806 KIAA0586Q9BVV6 1533 aa11.14□□□□□ -0.63
CCDC171-205ENST00000472806 FGD6Q6ZV73 1430 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms