RNA–Protein interactions for RNA: ENST00000470907.6

LOXL3-208, Transcript of lysyl oxidase like 3, humanhuman

TSL 2

Gene LOXL3, Length 2,837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-208ENST00000470907 PTPN23Q9H3S7 1636 aa19.41■□□□□ 0.7
LOXL3-208ENST00000470907 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
LOXL3-208ENST00000470907 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
LOXL3-208ENST00000470907 CHIC2Q9UKJ5 165 aa19.4■□□□□ 0.7
LOXL3-208ENST00000470907 BACH2Q9BYV9 841 aa19.39■□□□□ 0.7
LOXL3-208ENST00000470907 NAIPQ13075 1403 aa19.39■□□□□ 0.69
LOXL3-208ENST00000470907 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
LOXL3-208ENST00000470907 TCERG1O14776 1098 aaKnown RBP19.37■□□□□ 0.69
LOXL3-208ENST00000470907 NFKBIBQ15653 356 aa19.37■□□□□ 0.69
LOXL3-208ENST00000470907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
LOXL3-208ENST00000470907 NBPF8Q3BBV2 869 aa19.34■□□□□ 0.69
LOXL3-208ENST00000470907 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
LOXL3-208ENST00000470907 TOPBP1Q92547 1522 aa19.33■□□□□ 0.69
LOXL3-208ENST00000470907 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
LOXL3-208ENST00000470907 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
LOXL3-208ENST00000470907 RRP1P56182 461 aaKnown RBP19.31■□□□□ 0.68
LOXL3-208ENST00000470907 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
LOXL3-208ENST00000470907 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
LOXL3-208ENST00000470907 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
LOXL3-208ENST00000470907 DCAF11Q8TEB1 546 aa19.25■□□□□ 0.67
LOXL3-208ENST00000470907 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
LOXL3-208ENST00000470907 PKNOX2Q96KN3 472 aa19.24■□□□□ 0.67
LOXL3-208ENST00000470907 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
LOXL3-208ENST00000470907 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
LOXL3-208ENST00000470907 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
LOXL3-208ENST00000470907 MPHOSPH9Q99550 1183 aa19.24■□□□□ 0.67
LOXL3-208ENST00000470907 PLIN1O60240 522 aa19.23■□□□□ 0.67
LOXL3-208ENST00000470907 DDRGK1Q96HY6 314 aa19.23■□□□□ 0.67
LOXL3-208ENST00000470907 PDS5BQ9NTI5 1447 aa19.23■□□□□ 0.67
LOXL3-208ENST00000470907 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
LOXL3-208ENST00000470907 MS4A1P11836 297 aa19.22■□□□□ 0.67
LOXL3-208ENST00000470907 RCAN3Q9UKA8 241 aa19.22■□□□□ 0.67
LOXL3-208ENST00000470907 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
LOXL3-208ENST00000470907 RSPH6AQ9H0K4 717 aa19.21■□□□□ 0.67
LOXL3-208ENST00000470907 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
LOXL3-208ENST00000470907 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
LOXL3-208ENST00000470907 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
LOXL3-208ENST00000470907 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
LOXL3-208ENST00000470907 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
LOXL3-208ENST00000470907 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
LOXL3-208ENST00000470907 KDM6BO15054 1643 aa19.17■□□□□ 0.66
LOXL3-208ENST00000470907 FAM43AQ8N2R8 423 aa19.16■□□□□ 0.66
LOXL3-208ENST00000470907 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
LOXL3-208ENST00000470907 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
LOXL3-208ENST00000470907 CRBNQ96SW2 442 aa19.11■□□□□ 0.65
LOXL3-208ENST00000470907 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
LOXL3-208ENST00000470907 RRAGDQ9NQL2 400 aaPredicted RBP19.09■□□□□ 0.65
LOXL3-208ENST00000470907 HECW1Q76N89 1606 aa19.09■□□□□ 0.65
LOXL3-208ENST00000470907 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
LOXL3-208ENST00000470907 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
LOXL3-208ENST00000470907 ARXQ96QS3 562 aa19.08■□□□□ 0.65
LOXL3-208ENST00000470907 TEX14Q8IWB6 1497 aa19.07■□□□□ 0.64
LOXL3-208ENST00000470907 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
LOXL3-208ENST00000470907 VSIG10Q8N0Z9 540 aa19.06■□□□□ 0.64
LOXL3-208ENST00000470907 POGKQ9P215 609 aa19.06■□□□□ 0.64
LOXL3-208ENST00000470907 USP47Q96K76 1375 aa19.05■□□□□ 0.64
LOXL3-208ENST00000470907 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
LOXL3-208ENST00000470907 SNAPC4Q5SXM2 1469 aa19.04■□□□□ 0.64
LOXL3-208ENST00000470907 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
LOXL3-208ENST00000470907 ANKRD30BQ9BXX2 1392 aa19.04■□□□□ 0.64
LOXL3-208ENST00000470907 BCORL1Q5H9F3 1711 aa19.04■□□□□ 0.64
LOXL3-208ENST00000470907 LRPPRCP42704 1394 aaKnown RBP19.03■□□□□ 0.64
LOXL3-208ENST00000470907 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.64
LOXL3-208ENST00000470907 POLR1AO95602 1720 aaPredicted RBP19.02■□□□□ 0.64
LOXL3-208ENST00000470907 ZMYND15Q9H091 742 aa19.01■□□□□ 0.63
LOXL3-208ENST00000470907 RGS3P49796 1198 aa19■□□□□ 0.63
LOXL3-208ENST00000470907 C8orf34Q49A92 452 aa19■□□□□ 0.63
LOXL3-208ENST00000470907 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
LOXL3-208ENST00000470907 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
LOXL3-208ENST00000470907 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
LOXL3-208ENST00000470907 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
LOXL3-208ENST00000470907 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
LOXL3-208ENST00000470907 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
LOXL3-208ENST00000470907 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
LOXL3-208ENST00000470907 GLIPR1L2Q4G1C9 344 aa18.96■□□□□ 0.63
LOXL3-208ENST00000470907 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
LOXL3-208ENST00000470907 CUL7Q14999 1698 aa18.95■□□□□ 0.62
LOXL3-208ENST00000470907 KIF15Q9NS87 1388 aa18.95■□□□□ 0.62
LOXL3-208ENST00000470907 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
LOXL3-208ENST00000470907 FBLN2P98095 1184 aa18.94■□□□□ 0.62
LOXL3-208ENST00000470907 SLKQ9H2G2 1235 aaPredicted RBP18.93■□□□□ 0.62
LOXL3-208ENST00000470907 KDM2BQ8NHM5 1336 aa18.93■□□□□ 0.62
LOXL3-208ENST00000470907 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
LOXL3-208ENST00000470907 UGGT2Q9NYU1 1516 aa18.92■□□□□ 0.62
LOXL3-208ENST00000470907 KTN1Q86UP2 1357 aaKnown RBP18.92■□□□□ 0.62
LOXL3-208ENST00000470907 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
LOXL3-208ENST00000470907 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.62
LOXL3-208ENST00000470907 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
LOXL3-208ENST00000470907 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
LOXL3-208ENST00000470907 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
LOXL3-208ENST00000470907 RALBP1Q15311 655 aa18.88■□□□□ 0.61
LOXL3-208ENST00000470907 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
LOXL3-208ENST00000470907 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
LOXL3-208ENST00000470907 HSP90AA2PQ14568 343 aaPredicted RBP18.87■□□□□ 0.61
LOXL3-208ENST00000470907 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
LOXL3-208ENST00000470907 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
LOXL3-208ENST00000470907 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
LOXL3-208ENST00000470907 CTTNBP2Q8WZ74 1663 aa18.86■□□□□ 0.61
LOXL3-208ENST00000470907 TCOF1Q13428 1488 aaKnown RBP18.86■□□□□ 0.61
LOXL3-208ENST00000470907 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms