RNA–Protein interactions for RNA: ENST00000470907.6

LOXL3-208, Transcript of lysyl oxidase like 3, humanhuman

TSL 2

Gene LOXL3, Length 2,837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-208ENST00000470907 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
LOXL3-208ENST00000470907 HRCP23327 699 aa24.68■■□□□ 1.54
LOXL3-208ENST00000470907 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
LOXL3-208ENST00000470907 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
LOXL3-208ENST00000470907 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
LOXL3-208ENST00000470907 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
LOXL3-208ENST00000470907 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
LOXL3-208ENST00000470907 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
LOXL3-208ENST00000470907 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
LOXL3-208ENST00000470907 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
LOXL3-208ENST00000470907 LOC105371045A0A1W2PR82 267 aa23.37■■□□□ 1.33
LOXL3-208ENST00000470907 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
LOXL3-208ENST00000470907 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
LOXL3-208ENST00000470907 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
LOXL3-208ENST00000470907 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
LOXL3-208ENST00000470907 ZEB1P37275 1124 aaPredicted RBP23■■□□□ 1.27
LOXL3-208ENST00000470907 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
LOXL3-208ENST00000470907 MYT1Q01538 1121 aa22.87■■□□□ 1.25
LOXL3-208ENST00000470907 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
LOXL3-208ENST00000470907 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.24
LOXL3-208ENST00000470907 GTF3C3Q9Y5Q9 886 aa22.74■■□□□ 1.23
LOXL3-208ENST00000470907 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
LOXL3-208ENST00000470907 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
LOXL3-208ENST00000470907 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
LOXL3-208ENST00000470907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
LOXL3-208ENST00000470907 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
LOXL3-208ENST00000470907 CCER1Q8TC90 406 aaPredicted RBP22.33■■□□□ 1.16
LOXL3-208ENST00000470907 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
LOXL3-208ENST00000470907 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
LOXL3-208ENST00000470907 ABCC9O60706 1549 aa22.16■■□□□ 1.14
LOXL3-208ENST00000470907 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
LOXL3-208ENST00000470907 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
LOXL3-208ENST00000470907 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
LOXL3-208ENST00000470907 MIER1Q8N108 512 aa21.85■■□□□ 1.09
LOXL3-208ENST00000470907 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
LOXL3-208ENST00000470907 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
LOXL3-208ENST00000470907 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
LOXL3-208ENST00000470907 NACADO15069 1562 aa21.58■■□□□ 1.04
LOXL3-208ENST00000470907 ANP32EQ9BTT0 268 aa21.57■■□□□ 1.04
LOXL3-208ENST00000470907 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
LOXL3-208ENST00000470907 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
LOXL3-208ENST00000470907 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
LOXL3-208ENST00000470907 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
LOXL3-208ENST00000470907 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
LOXL3-208ENST00000470907 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
LOXL3-208ENST00000470907 CEP162Q5TB80 1403 aa21.31■■□□□ 1
LOXL3-208ENST00000470907 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
LOXL3-208ENST00000470907 BCANQ96GW7 911 aa21.25■□□□□ 0.99
LOXL3-208ENST00000470907 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
LOXL3-208ENST00000470907 CLSPNQ9HAW4 1339 aa21.21■□□□□ 0.99
LOXL3-208ENST00000470907 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
LOXL3-208ENST00000470907 WIZO95785 1651 aa21.1■□□□□ 0.97
LOXL3-208ENST00000470907 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
LOXL3-208ENST00000470907 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
LOXL3-208ENST00000470907 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
LOXL3-208ENST00000470907 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
LOXL3-208ENST00000470907 SOGA1O94964 1423 aa21.06■□□□□ 0.96
LOXL3-208ENST00000470907 FKBP8Q14318 412 aa21■□□□□ 0.95
LOXL3-208ENST00000470907 RBM19Q9Y4C8 960 aaKnown RBP20.98■□□□□ 0.95
LOXL3-208ENST00000470907 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
LOXL3-208ENST00000470907 BAZ1AQ9NRL2 1556 aaPredicted RBP20.94■□□□□ 0.94
LOXL3-208ENST00000470907 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
LOXL3-208ENST00000470907 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
LOXL3-208ENST00000470907 ITGAEP38570 1179 aa20.91■□□□□ 0.94
LOXL3-208ENST00000470907 PRKCSHP14314 528 aaPredicted RBP20.88■□□□□ 0.93
LOXL3-208ENST00000470907 MSH5O43196 834 aa20.86■□□□□ 0.93
LOXL3-208ENST00000470907 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
LOXL3-208ENST00000470907 DHX57Q6P158 1386 aaKnown RBP20.8■□□□□ 0.92
LOXL3-208ENST00000470907 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
LOXL3-208ENST00000470907 APLP2Q06481 763 aa20.78■□□□□ 0.92
LOXL3-208ENST00000470907 GOLGA3Q08378 1498 aa20.77■□□□□ 0.92
LOXL3-208ENST00000470907 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
LOXL3-208ENST00000470907 NEFLP07196 543 aa20.73■□□□□ 0.91
LOXL3-208ENST00000470907 CLIP1P30622 1438 aa20.7■□□□□ 0.9
LOXL3-208ENST00000470907 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
LOXL3-208ENST00000470907 EEA1Q15075 1411 aa20.66■□□□□ 0.9
LOXL3-208ENST00000470907 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
LOXL3-208ENST00000470907 ERICH6Q7L0X2 663 aa20.64■□□□□ 0.9
LOXL3-208ENST00000470907 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
LOXL3-208ENST00000470907 DDX10Q13206 875 aaKnown RBP20.63■□□□□ 0.89
LOXL3-208ENST00000470907 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
LOXL3-208ENST00000470907 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
LOXL3-208ENST00000470907 CEP164Q9UPV0 1460 aa20.52■□□□□ 0.87
LOXL3-208ENST00000470907 HIRIP3Q9BW71 556 aaPredicted RBP20.51■□□□□ 0.87
LOXL3-208ENST00000470907 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
LOXL3-208ENST00000470907 KANK4Q5T7N3 995 aaPredicted RBP20.49■□□□□ 0.87
LOXL3-208ENST00000470907 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
LOXL3-208ENST00000470907 ANO8Q9HCE9 1232 aaPredicted RBP20.43■□□□□ 0.86
LOXL3-208ENST00000470907 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
LOXL3-208ENST00000470907 KIF21BO75037 1637 aa20.43■□□□□ 0.86
LOXL3-208ENST00000470907 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
LOXL3-208ENST00000470907 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
LOXL3-208ENST00000470907 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
LOXL3-208ENST00000470907 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
LOXL3-208ENST00000470907 NBR1Q14596 966 aa20.35■□□□□ 0.85
LOXL3-208ENST00000470907 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
LOXL3-208ENST00000470907 ANP32CO43423 234 aa20.34■□□□□ 0.85
LOXL3-208ENST00000470907 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
LOXL3-208ENST00000470907 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
LOXL3-208ENST00000470907 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms