RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 ABCA8O94911 1581 aa9.81□□□□□ -0.84
CDHR3-204ENST00000466351 ERCC6Q03468 1493 aa9.81□□□□□ -0.84
CDHR3-204ENST00000466351 TONSLQ96HA7 1378 aa9.81□□□□□ -0.84
CDHR3-204ENST00000466351 CDK11AQ9UQ88 783 aaPredicted RBP9.81□□□□□ -0.84
CDHR3-204ENST00000466351 DAPK1P53355 1430 aa9.81□□□□□ -0.84
CDHR3-204ENST00000466351 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
CDHR3-204ENST00000466351 HOXD11P31277 338 aaPredicted RBP9.8□□□□□ -0.84
CDHR3-204ENST00000466351 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
CDHR3-204ENST00000466351 KIF14Q15058 1648 aa9.8□□□□□ -0.84
CDHR3-204ENST00000466351 ITGAEP38570 1179 aa9.79□□□□□ -0.84
CDHR3-204ENST00000466351 NCBP3Q53F19 620 aaKnown RBP9.79□□□□□ -0.84
CDHR3-204ENST00000466351 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-204ENST00000466351 CDC42BPAQ5VT25 1732 aa9.78□□□□□ -0.84
CDHR3-204ENST00000466351 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.84
CDHR3-204ENST00000466351 ARHGEF5Q12774 1597 aa9.77□□□□□ -0.85
CDHR3-204ENST00000466351 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-204ENST00000466351 SHROOM2Q13796 1616 aa9.77□□□□□ -0.85
CDHR3-204ENST00000466351 DENND4BO75064 1496 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-204ENST00000466351 CAMSAP2Q08AD1 1489 aa9.76□□□□□ -0.85
CDHR3-204ENST00000466351 RPRD2Q5VT52 1461 aaKnown RBP9.76□□□□□ -0.85
CDHR3-204ENST00000466351 CCER2I3L3R5 266 aa9.75□□□□□ -0.85
CDHR3-204ENST00000466351 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
CDHR3-204ENST00000466351 ABCC5O15440 1437 aa9.74□□□□□ -0.85
CDHR3-204ENST00000466351 KDM6BO15054 1643 aa9.74□□□□□ -0.85
CDHR3-204ENST00000466351 TEX14Q8IWB6 1497 aa9.73□□□□□ -0.85
CDHR3-204ENST00000466351 GPATCH8Q9UKJ3 1502 aaKnown RBP9.73□□□□□ -0.85
CDHR3-204ENST00000466351 PREX2Q70Z35 1606 aa9.73□□□□□ -0.85
CDHR3-204ENST00000466351 ABCC10Q5T3U5 1492 aa9.72□□□□□ -0.85
CDHR3-204ENST00000466351 ARHGEF12Q9NZN5 1544 aa9.72□□□□□ -0.85
CDHR3-204ENST00000466351 MAST1Q9Y2H9 1570 aa9.71□□□□□ -0.85
CDHR3-204ENST00000466351 NPM3O75607 178 aaKnown RBP9.71□□□□□ -0.86
CDHR3-204ENST00000466351 KCNA4P22459 653 aa9.71□□□□□ -0.86
CDHR3-204ENST00000466351 ANKRD30BQ9BXX2 1392 aa9.7□□□□□ -0.86
CDHR3-204ENST00000466351 NCOA1Q15788 1441 aa9.7□□□□□ -0.86
CDHR3-204ENST00000466351 DCAF8L1A6NGE4 600 aa9.69□□□□□ -0.86
CDHR3-204ENST00000466351 CHD1O14646 1710 aa9.69□□□□□ -0.86
CDHR3-204ENST00000466351 PLB1Q6P1J6 1458 aa9.69□□□□□ -0.86
CDHR3-204ENST00000466351 SIN3AQ96ST3 1273 aa9.69□□□□□ -0.86
CDHR3-204ENST00000466351 MBD5Q9P267 1494 aa9.69□□□□□ -0.86
CDHR3-204ENST00000466351 PLXNC1O60486 1568 aa9.68□□□□□ -0.86
CDHR3-204ENST00000466351 ANKRD30AQ9BXX3 1397 aa9.68□□□□□ -0.86
CDHR3-204ENST00000466351 PZPP20742 1482 aa9.67□□□□□ -0.86
CDHR3-204ENST00000466351 CHMP7Q8WUX9 453 aaPredicted RBP9.67□□□□□ -0.86
CDHR3-204ENST00000466351 PLEKHH2Q8IVE3 1493 aa9.66□□□□□ -0.86
CDHR3-204ENST00000466351 PTPRGP23470 1445 aa9.66□□□□□ -0.86
CDHR3-204ENST00000466351 CDC42BPBQ9Y5S2 1711 aa9.66□□□□□ -0.86
CDHR3-204ENST00000466351 ATP10BO94823 1461 aa9.66□□□□□ -0.86
CDHR3-204ENST00000466351 PRG4Q92954 1404 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-204ENST00000466351 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
CDHR3-204ENST00000466351 MYO5CQ9NQX4 1742 aa9.65□□□□□ -0.86
CDHR3-204ENST00000466351 YTHDC1Q96MU7 727 aaKnown RBP9.65□□□□□ -0.86
CDHR3-204ENST00000466351 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
CDHR3-204ENST00000466351 UNC13BO14795 1591 aa9.65□□□□□ -0.86
CDHR3-204ENST00000466351 ARAP3Q8WWN8 1544 aa9.65□□□□□ -0.86
CDHR3-204ENST00000466351 ANP32CO43423 234 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 RSPH4AQ5TD94 716 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 UHRF1BP1Q6BDS2 1440 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 SPATA31E1Q6ZUB1 1445 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 CNTLNQ9NXG0 1405 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 LAMC1P11047 1609 aa9.64□□□□□ -0.87
CDHR3-204ENST00000466351 ARID4BQ4LE39 1312 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-204ENST00000466351 ABCC2Q92887 1545 aa9.63□□□□□ -0.87
CDHR3-204ENST00000466351 CCDC141Q6ZP82 1450 aa9.63□□□□□ -0.87
CDHR3-204ENST00000466351 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
CDHR3-204ENST00000466351 ANKRD50Q9ULJ7 1429 aa9.63□□□□□ -0.87
CDHR3-204ENST00000466351 UHRF1BP1LA0JNW5 1464 aa9.62□□□□□ -0.87
CDHR3-204ENST00000466351 CFDP1Q9UEE9 299 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-204ENST00000466351 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
CDHR3-204ENST00000466351 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
CDHR3-204ENST00000466351 EIF4G2P78344 907 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDHR3-204ENST00000466351 RRP7BPQ9NSQ0 103 aa9.61□□□□□ -0.87
CDHR3-204ENST00000466351 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
CDHR3-204ENST00000466351 KDM5CP41229 1560 aa9.6□□□□□ -0.87
CDHR3-204ENST00000466351 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
CDHR3-204ENST00000466351 CLASP1Q7Z460 1538 aa9.6□□□□□ -0.87
CDHR3-204ENST00000466351 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
CDHR3-204ENST00000466351 MYT1Q01538 1121 aa9.59□□□□□ -0.87
CDHR3-204ENST00000466351 DDX10Q13206 875 aaKnown RBP9.59□□□□□ -0.87
CDHR3-204ENST00000466351 EIF2AK4Q9P2K8 1649 aaKnown RBP9.58□□□□□ -0.88
CDHR3-204ENST00000466351 TRIM52Q96A61 297 aa9.58□□□□□ -0.88
CDHR3-204ENST00000466351 ROCK2O75116 1388 aaKnown RBP9.58□□□□□ -0.88
CDHR3-204ENST00000466351 CCDC7Q96M83 1385 aa9.57□□□□□ -0.88
CDHR3-204ENST00000466351 ATP10AO60312 1499 aa9.57□□□□□ -0.88
CDHR3-204ENST00000466351 E9PCH4 1651 aa9.56□□□□□ -0.88
CDHR3-204ENST00000466351 TTC37Q6PGP7 1564 aa9.56□□□□□ -0.88
CDHR3-204ENST00000466351 SLC4A1APQ9BWU0 796 aaKnown RBP9.56□□□□□ -0.88
CDHR3-204ENST00000466351 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
CDHR3-204ENST00000466351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDHR3-204ENST00000466351 DUOX2Q9NRD8 1548 aa9.56□□□□□ -0.88
CDHR3-204ENST00000466351 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
CDHR3-204ENST00000466351 NEURL4Q96JN8 1562 aa9.55□□□□□ -0.88
CDHR3-204ENST00000466351 KTN1Q86UP2 1357 aaKnown RBP9.55□□□□□ -0.88
CDHR3-204ENST00000466351 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
CDHR3-204ENST00000466351 SUPT16HQ9Y5B9 1047 aaKnown RBP9.55□□□□□ -0.88
CDHR3-204ENST00000466351 ERBINQ96RT1 1412 aa9.55□□□□□ -0.88
CDHR3-204ENST00000466351 WDR7Q9Y4E6 1490 aa9.54□□□□□ -0.88
CDHR3-204ENST00000466351 KIF15Q9NS87 1388 aa9.54□□□□□ -0.88
CDHR3-204ENST00000466351 ZCCHC11Q5TAX3 1644 aaKnown RBP9.54□□□□□ -0.88
CDHR3-204ENST00000466351 HSPA5P11021 654 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms