RNA–Protein interactions for RNA: ENST00000465344.1

NUP188-203, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 400 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-203ENST00000465344 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
NUP188-203ENST00000465344 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
NUP188-203ENST00000465344 ABCC8Q09428 1581 aa10.23□□□□□ -0.77
NUP188-203ENST00000465344 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
NUP188-203ENST00000465344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
NUP188-203ENST00000465344 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
NUP188-203ENST00000465344 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
NUP188-203ENST00000465344 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
NUP188-203ENST00000465344 IFT140Q96RY7 1462 aa10.21□□□□□ -0.78
NUP188-203ENST00000465344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.2□□□□□ -0.78
NUP188-203ENST00000465344 TOPBP1Q92547 1522 aa10.18□□□□□ -0.78
NUP188-203ENST00000465344 RGL2O15211 777 aa10.18□□□□□ -0.78
NUP188-203ENST00000465344 EFCAB3Q8N7B9 438 aa10.16□□□□□ -0.78
NUP188-203ENST00000465344 ZNF608Q9ULD9 1512 aaPredicted RBP10.16□□□□□ -0.78
NUP188-203ENST00000465344 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
NUP188-203ENST00000465344 AQRO60306 1485 aaKnown RBP eCLIP10.13□□□□□ -0.79
NUP188-203ENST00000465344 SOX12O15370 315 aa10.13□□□□□ -0.79
NUP188-203ENST00000465344 SOGA1O94964 1423 aa10.13□□□□□ -0.79
NUP188-203ENST00000465344 DNMBPQ6XZF7 1577 aa10.13□□□□□ -0.79
NUP188-203ENST00000465344 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
NUP188-203ENST00000465344 PRDM2Q13029 1718 aa10.1□□□□□ -0.79
NUP188-203ENST00000465344 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
NUP188-203ENST00000465344 CHMP7Q8WUX9 453 aaPredicted RBP10.1□□□□□ -0.79
NUP188-203ENST00000465344 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
NUP188-203ENST00000465344 CYB5RLQ6IPT4 315 aa10.09□□□□□ -0.79
NUP188-203ENST00000465344 STK24Q9Y6E0 443 aa10.08□□□□□ -0.8
NUP188-203ENST00000465344 POLA1P09884 1462 aaPredicted RBP10.08□□□□□ -0.8
NUP188-203ENST00000465344 RAD54L2Q9Y4B4 1467 aa10.07□□□□□ -0.8
NUP188-203ENST00000465344 STK25O00506 426 aa10.07□□□□□ -0.8
NUP188-203ENST00000465344 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
NUP188-203ENST00000465344 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.07□□□□□ -0.8
NUP188-203ENST00000465344 MS4A4AQ96JQ5 239 aa10.05□□□□□ -0.8
NUP188-203ENST00000465344 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
NUP188-203ENST00000465344 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
NUP188-203ENST00000465344 PHF8Q9UPP1 1060 aa10.04□□□□□ -0.8
NUP188-203ENST00000465344 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
NUP188-203ENST00000465344 EIF4G3O43432 1585 aaKnown RBP10.03□□□□□ -0.8
NUP188-203ENST00000465344 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
NUP188-203ENST00000465344 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
NUP188-203ENST00000465344 TARBP1Q13395 1621 aaKnown RBP10.03□□□□□ -0.8
NUP188-203ENST00000465344 NLRP6P59044 892 aa10.02□□□□□ -0.81
NUP188-203ENST00000465344 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
NUP188-203ENST00000465344 LCE2DQ5TA82 110 aaPredicted RBP10□□□□□ -0.81
NUP188-203ENST00000465344 CUX1P39880 1505 aa10□□□□□ -0.81
NUP188-203ENST00000465344 GRIN2BQ13224 1484 aa9.99□□□□□ -0.81
NUP188-203ENST00000465344 ARHGEF11O15085 1522 aa9.99□□□□□ -0.81
NUP188-203ENST00000465344 G3V3G9 751 aa9.99□□□□□ -0.81
NUP188-203ENST00000465344 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
NUP188-203ENST00000465344 RIMBP3CA6NJZ7 1639 aa9.98□□□□□ -0.81
NUP188-203ENST00000465344 RIMBP3BA6NNM3 1639 aa9.98□□□□□ -0.81
NUP188-203ENST00000465344 RIMBP3Q9UFD9 1639 aa9.98□□□□□ -0.81
NUP188-203ENST00000465344 SNAPC4Q5SXM2 1469 aa9.98□□□□□ -0.81
NUP188-203ENST00000465344 MICALL2Q8IY33 904 aa9.97□□□□□ -0.81
NUP188-203ENST00000465344 WRNQ14191 1432 aaPredicted RBP eCLIP9.97□□□□□ -0.81
NUP188-203ENST00000465344 GAPVD1Q14C86 1478 aa9.97□□□□□ -0.81
NUP188-203ENST00000465344 FAM163AQ96GL9 167 aaPredicted RBP9.96□□□□□ -0.82
NUP188-203ENST00000465344 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
NUP188-203ENST00000465344 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
NUP188-203ENST00000465344 SYNJ2O15056 1496 aa9.94□□□□□ -0.82
NUP188-203ENST00000465344 SNPHO15079 494 aa9.94□□□□□ -0.82
NUP188-203ENST00000465344 POTEMA6NI47 508 aa9.92□□□□□ -0.82
NUP188-203ENST00000465344 ABCA10Q8WWZ4 1543 aa9.92□□□□□ -0.82
NUP188-203ENST00000465344 CHD1O14646 1710 aa9.91□□□□□ -0.82
NUP188-203ENST00000465344 CHGAP10645 457 aaKnown RBP9.91□□□□□ -0.82
NUP188-203ENST00000465344 SYNJ1O43426 1573 aa9.9□□□□□ -0.82
NUP188-203ENST00000465344 POTEGQ6S5H5 508 aa9.9□□□□□ -0.82
NUP188-203ENST00000465344 ST18O60284 1047 aa9.89□□□□□ -0.83
NUP188-203ENST00000465344 TMEM92Q6UXU6 159 aa9.89□□□□□ -0.83
NUP188-203ENST00000465344 ARAP1Q96P48 1450 aa9.89□□□□□ -0.83
NUP188-203ENST00000465344 FHAD1B1AJZ9 1412 aa9.85□□□□□ -0.83
NUP188-203ENST00000465344 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
NUP188-203ENST00000465344 PPP1R37O75864 691 aa9.84□□□□□ -0.83
NUP188-203ENST00000465344 NKX1-1Q15270 411 aaPredicted RBP9.84□□□□□ -0.83
NUP188-203ENST00000465344 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
NUP188-203ENST00000465344 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
NUP188-203ENST00000465344 AMER1Q5JTC6 1135 aaPredicted RBP9.83□□□□□ -0.84
NUP188-203ENST00000465344 GRIN2AQ12879 1464 aa9.83□□□□□ -0.84
NUP188-203ENST00000465344 JPH4Q96JJ6 628 aa9.82□□□□□ -0.84
NUP188-203ENST00000465344 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
NUP188-203ENST00000465344 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
NUP188-203ENST00000465344 KIF3CO14782 793 aa9.8□□□□□ -0.84
NUP188-203ENST00000465344 PBRM1Q86U86 1689 aa9.8□□□□□ -0.84
NUP188-203ENST00000465344 BIVM-ERCC5R4GMW8 1640 aa9.79□□□□□ -0.84
NUP188-203ENST00000465344 ERICH3Q5RHP9 1530 aa9.79□□□□□ -0.84
NUP188-203ENST00000465344 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
NUP188-203ENST00000465344 NUP160Q12769 1436 aa9.79□□□□□ -0.84
NUP188-203ENST00000465344 DOK7Q18PE1 504 aa9.78□□□□□ -0.84
NUP188-203ENST00000465344 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
NUP188-203ENST00000465344 PRG4Q92954 1404 aaPredicted RBP9.76□□□□□ -0.85
NUP188-203ENST00000465344 IGF1RP08069 1367 aa9.75□□□□□ -0.85
NUP188-203ENST00000465344 ADAMTS12P58397 1594 aa9.75□□□□□ -0.85
NUP188-203ENST00000465344 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
NUP188-203ENST00000465344 C2orf72A6NCS6 295 aa9.74□□□□□ -0.85
NUP188-203ENST00000465344 CEP170Q5SW79 1584 aa9.73□□□□□ -0.85
NUP188-203ENST00000465344 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
NUP188-203ENST00000465344 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
NUP188-203ENST00000465344 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
NUP188-203ENST00000465344 RIMBP2O15034 1052 aa9.72□□□□□ -0.85
NUP188-203ENST00000465344 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
NUP188-203ENST00000465344 MARVELD3Q96A59 401 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms