RNA–Protein interactions for RNA: ENST00000465344.1

NUP188-203, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 400 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-203ENST00000465344 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
NUP188-203ENST00000465344 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
NUP188-203ENST00000465344 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
NUP188-203ENST00000465344 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
NUP188-203ENST00000465344 FOXD1Q16676 465 aa17.18■□□□□ 0.34
NUP188-203ENST00000465344 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
NUP188-203ENST00000465344 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
NUP188-203ENST00000465344 ADRA2BP18089 450 aa16.22■□□□□ 0.19
NUP188-203ENST00000465344 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
NUP188-203ENST00000465344 MSH5O43196 834 aa15.98■□□□□ 0.15
NUP188-203ENST00000465344 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
NUP188-203ENST00000465344 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
NUP188-203ENST00000465344 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
NUP188-203ENST00000465344 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
NUP188-203ENST00000465344 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
NUP188-203ENST00000465344 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
NUP188-203ENST00000465344 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
NUP188-203ENST00000465344 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
NUP188-203ENST00000465344 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
NUP188-203ENST00000465344 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
NUP188-203ENST00000465344 KCNA4P22459 653 aa14.05□□□□□ -0.16
NUP188-203ENST00000465344 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
NUP188-203ENST00000465344 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
NUP188-203ENST00000465344 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
NUP188-203ENST00000465344 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
NUP188-203ENST00000465344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
NUP188-203ENST00000465344 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
NUP188-203ENST00000465344 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
NUP188-203ENST00000465344 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
NUP188-203ENST00000465344 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
NUP188-203ENST00000465344 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
NUP188-203ENST00000465344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
NUP188-203ENST00000465344 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
NUP188-203ENST00000465344 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
NUP188-203ENST00000465344 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
NUP188-203ENST00000465344 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
NUP188-203ENST00000465344 APLP2Q06481 763 aa13□□□□□ -0.33
NUP188-203ENST00000465344 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
NUP188-203ENST00000465344 CAPN15O75808 1086 aa12.97□□□□□ -0.33
NUP188-203ENST00000465344 ZBTB22O15209 634 aa12.94□□□□□ -0.34
NUP188-203ENST00000465344 DSG3P32926 999 aa12.89□□□□□ -0.35
NUP188-203ENST00000465344 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
NUP188-203ENST00000465344 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
NUP188-203ENST00000465344 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
NUP188-203ENST00000465344 ABCB7O75027 752 aa12.68□□□□□ -0.38
NUP188-203ENST00000465344 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
NUP188-203ENST00000465344 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
NUP188-203ENST00000465344 POLA2Q14181 598 aa12.58□□□□□ -0.4
NUP188-203ENST00000465344 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
NUP188-203ENST00000465344 ABCC9O60706 1549 aa12.41□□□□□ -0.42
NUP188-203ENST00000465344 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
NUP188-203ENST00000465344 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
NUP188-203ENST00000465344 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
NUP188-203ENST00000465344 FBLN2P98095 1184 aa12.16□□□□□ -0.46
NUP188-203ENST00000465344 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
NUP188-203ENST00000465344 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
NUP188-203ENST00000465344 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
NUP188-203ENST00000465344 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
NUP188-203ENST00000465344 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
NUP188-203ENST00000465344 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
NUP188-203ENST00000465344 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
NUP188-203ENST00000465344 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
NUP188-203ENST00000465344 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
NUP188-203ENST00000465344 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
NUP188-203ENST00000465344 POTEHQ6S545 545 aa11.88□□□□□ -0.51
NUP188-203ENST00000465344 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
NUP188-203ENST00000465344 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
NUP188-203ENST00000465344 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
NUP188-203ENST00000465344 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
NUP188-203ENST00000465344 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
NUP188-203ENST00000465344 NACADO15069 1562 aa11.71□□□□□ -0.53
NUP188-203ENST00000465344 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
NUP188-203ENST00000465344 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■■■□ 23.8
NUP188-203ENST00000465344 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
NUP188-203ENST00000465344 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
NUP188-203ENST00000465344 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
NUP188-203ENST00000465344 PROM2Q8N271 834 aa11.53□□□□□ -0.56
NUP188-203ENST00000465344 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
NUP188-203ENST00000465344 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
NUP188-203ENST00000465344 PRKAR2AP13861 404 aaKnown RBP11.48□□□□□ -0.57
NUP188-203ENST00000465344 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
NUP188-203ENST00000465344 DCAF1Q9Y4B6 1507 aa11.41□□□□□ -0.58
NUP188-203ENST00000465344 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
NUP188-203ENST00000465344 FKBP8Q14318 412 aa11.37□□□□□ -0.59
NUP188-203ENST00000465344 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
NUP188-203ENST00000465344 HAX1O00165 279 aa11.34□□□□□ -0.59
NUP188-203ENST00000465344 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
NUP188-203ENST00000465344 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
NUP188-203ENST00000465344 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
NUP188-203ENST00000465344 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
NUP188-203ENST00000465344 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
NUP188-203ENST00000465344 SCRIBQ14160 1630 aa11.27□□□□□ -0.6
NUP188-203ENST00000465344 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.6
NUP188-203ENST00000465344 EVX2Q03828 476 aa11.26□□□□□ -0.61
NUP188-203ENST00000465344 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
NUP188-203ENST00000465344 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
NUP188-203ENST00000465344 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
NUP188-203ENST00000465344 EIF4G1Q04637 1599 aaKnown RBP11.13□□□□□ -0.63
NUP188-203ENST00000465344 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
NUP188-203ENST00000465344 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms