RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 PSMD1Q99460 953 aa7.65□□□□□ -1.18
TRA2B-207ENST00000463328 DNMBPQ6XZF7 1577 aa7.65□□□□□ -1.19
TRA2B-207ENST00000463328 CLIP1P30622 1438 aa7.64□□□□□ -1.19
TRA2B-207ENST00000463328 CLSTN1O94985 981 aa7.64□□□□□ -1.19
TRA2B-207ENST00000463328 AAMPQ13685 434 aa7.64□□□□□ -1.19
TRA2B-207ENST00000463328 VPS8Q8N3P4 1428 aa7.63□□□□□ -1.19
TRA2B-207ENST00000463328 DMRT2Q9Y5R5 561 aa7.63□□□□□ -1.19
TRA2B-207ENST00000463328 CHGAP10645 457 aaKnown RBP7.63□□□□□ -1.19
TRA2B-207ENST00000463328 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-207ENST00000463328 GZF1Q9H116 711 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-207ENST00000463328 E9PSI1 815 aa7.62□□□□□ -1.19
TRA2B-207ENST00000463328 NAP1L5Q96NT1 182 aaPredicted RBP7.62□□□□□ -1.19
TRA2B-207ENST00000463328 MKRN3Q13064 507 aaKnown RBP7.62□□□□□ -1.19
TRA2B-207ENST00000463328 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
TRA2B-207ENST00000463328 CC2D2BQ6DHV5 1058 aa7.62□□□□□ -1.19
TRA2B-207ENST00000463328 TOPBP1Q92547 1522 aa7.61□□□□□ -1.19
TRA2B-207ENST00000463328 FGD5Q6ZNL6 1462 aa7.61□□□□□ -1.19
TRA2B-207ENST00000463328 ZNF526Q8TF50 670 aaPredicted RBP7.61□□□□□ -1.19
TRA2B-207ENST00000463328 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
TRA2B-207ENST00000463328 IGF1RP08069 1367 aa7.6□□□□□ -1.19
TRA2B-207ENST00000463328 ARID4BQ4LE39 1312 aaPredicted RBP7.6□□□□□ -1.19
TRA2B-207ENST00000463328 SLC4A2P04920 1241 aa7.6□□□□□ -1.19
TRA2B-207ENST00000463328 PRDM10Q9NQV6 1147 aa7.6□□□□□ -1.19
TRA2B-207ENST00000463328 NESP48681 1621 aa7.6□□□□□ -1.19
TRA2B-207ENST00000463328 ABCA10Q8WWZ4 1543 aa7.6□□□□□ -1.19
TRA2B-207ENST00000463328 CUX2O14529 1486 aa7.6□□□□□ -1.19
TRA2B-207ENST00000463328 KDM4AO75164 1064 aa7.59□□□□□ -1.2
TRA2B-207ENST00000463328 DNAJC5BQ9UF47 199 aa7.59□□□□□ -1.2
TRA2B-207ENST00000463328 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
TRA2B-207ENST00000463328 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
TRA2B-207ENST00000463328 ZC3H15Q8WU90 426 aaKnown RBP7.58□□□□□ -1.2
TRA2B-207ENST00000463328 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-207ENST00000463328 CARMIL1Q5VZK9 1371 aa7.56□□□□□ -1.2
TRA2B-207ENST00000463328 MAP3K1Q13233 1512 aa7.56□□□□□ -1.2
TRA2B-207ENST00000463328 URB2Q14146 1524 aaKnown RBP7.56□□□□□ -1.2
TRA2B-207ENST00000463328 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
TRA2B-207ENST00000463328 WDR97A6NE52 1622 aa7.56□□□□□ -1.2
TRA2B-207ENST00000463328 CUL7Q14999 1698 aa7.55□□□□□ -1.2
TRA2B-207ENST00000463328 ARAP1Q96P48 1450 aa7.55□□□□□ -1.2
TRA2B-207ENST00000463328 MRC2Q9UBG0 1479 aa7.55□□□□□ -1.2
TRA2B-207ENST00000463328 GPBP1L1Q9HC44 474 aaPredicted RBP7.55□□□□□ -1.2
TRA2B-207ENST00000463328 SCAF1Q9H7N4 1312 aaKnown RBP7.55□□□□□ -1.2
TRA2B-207ENST00000463328 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
TRA2B-207ENST00000463328 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
TRA2B-207ENST00000463328 ARHGAP35Q9NRY4 1499 aa7.52□□□□□ -1.21
TRA2B-207ENST00000463328 IRF5Q13568 498 aa7.52□□□□□ -1.21
TRA2B-207ENST00000463328 TEX2Q8IWB9 1127 aa7.52□□□□□ -1.21
TRA2B-207ENST00000463328 ATF5Q9Y2D1 282 aaPredicted RBP7.51□□□□□ -1.21
TRA2B-207ENST00000463328 RAD54L2Q9Y4B4 1467 aa7.51□□□□□ -1.21
TRA2B-207ENST00000463328 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
TRA2B-207ENST00000463328 EFCAB5A4FU69 1503 aa7.5□□□□□ -1.21
TRA2B-207ENST00000463328 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
TRA2B-207ENST00000463328 KIF21AQ7Z4S6 1674 aa7.5□□□□□ -1.21
TRA2B-207ENST00000463328 CNPY4Q8N129 248 aa7.5□□□□□ -1.21
TRA2B-207ENST00000463328 GAPVD1Q14C86 1478 aa7.49□□□□□ -1.21
TRA2B-207ENST00000463328 IFT140Q96RY7 1462 aa7.49□□□□□ -1.21
TRA2B-207ENST00000463328 NKX1-1Q15270 411 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-207ENST00000463328 WDR62O43379 1518 aa7.49□□□□□ -1.21
TRA2B-207ENST00000463328 CTTNBP2Q8WZ74 1663 aa7.48□□□□□ -1.21
TRA2B-207ENST00000463328 TARBP1Q13395 1621 aaKnown RBP7.48□□□□□ -1.21
TRA2B-207ENST00000463328 AQRO60306 1485 aaKnown RBP eCLIP7.48□□□□□ -1.214e-7■■■■□ 20.3
TRA2B-207ENST00000463328 FHAD1B1AJZ9 1412 aa7.47□□□□□ -1.21
TRA2B-207ENST00000463328 RETREG2Q8NC44 543 aa7.47□□□□□ -1.21
TRA2B-207ENST00000463328 ERCC6Q03468 1493 aa7.47□□□□□ -1.21
TRA2B-207ENST00000463328 RRBP1Q9P2E9 1410 aaKnown RBP7.47□□□□□ -1.21
TRA2B-207ENST00000463328 PROM2Q8N271 834 aa7.47□□□□□ -1.21
TRA2B-207ENST00000463328 CLUAP1Q96AJ1 413 aa7.46□□□□□ -1.21
TRA2B-207ENST00000463328 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.22
TRA2B-207ENST00000463328 RBM10P98175 930 aaKnown RBP7.45□□□□□ -1.22
TRA2B-207ENST00000463328 KCNV2Q8TDN2 545 aa7.45□□□□□ -1.22
TRA2B-207ENST00000463328 GRIN2BQ13224 1484 aa7.45□□□□□ -1.22
TRA2B-207ENST00000463328 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
TRA2B-207ENST00000463328 WDR70Q9NW82 654 aa7.45□□□□□ -1.22
TRA2B-207ENST00000463328 TIAM1Q13009 1591 aa7.45□□□□□ -1.22
TRA2B-207ENST00000463328 CLSPNQ9HAW4 1339 aa7.45□□□□□ -1.22
TRA2B-207ENST00000463328 PLCD4Q9BRC7 762 aa7.44□□□□□ -1.22
TRA2B-207ENST00000463328 UNCXA6NJT0 531 aa7.44□□□□□ -1.22
TRA2B-207ENST00000463328 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
TRA2B-207ENST00000463328 CFAP43Q8NDM7 1665 aa7.44□□□□□ -1.22
TRA2B-207ENST00000463328 MYCNP04198 464 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-207ENST00000463328 FBXW7Q969H0 707 aa7.43□□□□□ -1.22
TRA2B-207ENST00000463328 SAMD9Q5K651 1589 aa7.43□□□□□ -1.22
TRA2B-207ENST00000463328 LOC102724159A0A0B4J2E5 919 aa7.42□□□□□ -1.22
TRA2B-207ENST00000463328 PWP2Q15269 919 aaKnown RBP7.42□□□□□ -1.22
TRA2B-207ENST00000463328 FYCO1Q9BQS8 1478 aa7.42□□□□□ -1.22
TRA2B-207ENST00000463328 GTPBP6O43824 516 aaPredicted RBP7.42□□□□□ -1.22
TRA2B-207ENST00000463328 BRD1O95696 1058 aa7.42□□□□□ -1.22
TRA2B-207ENST00000463328 BARGINQ6ZT62 677 aa7.42□□□□□ -1.22
TRA2B-207ENST00000463328 CASKIN1Q8WXD9 1431 aa7.42□□□□□ -1.22
TRA2B-207ENST00000463328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.42□□□□□ -1.22
TRA2B-207ENST00000463328 HS6ST3Q8IZP7 471 aa7.42□□□□□ -1.22
TRA2B-207ENST00000463328 TRAK2O60296 914 aa7.41□□□□□ -1.22
TRA2B-207ENST00000463328 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
TRA2B-207ENST00000463328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRA2B-207ENST00000463328 FMN1Q68DA7 1419 aa7.41□□□□□ -1.22
TRA2B-207ENST00000463328 PBRM1Q86U86 1689 aa7.41□□□□□ -1.22
TRA2B-207ENST00000463328 LRRC9Q6ZRR7 1453 aa7.41□□□□□ -1.22
TRA2B-207ENST00000463328 KANK4Q5T7N3 995 aaPredicted RBP7.41□□□□□ -1.22
TRA2B-207ENST00000463328 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
TRA2B-207ENST00000463328 THOC2Q8NI27 1593 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms