RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.59
SYT1-204ENST00000457153 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
SYT1-204ENST00000457153 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SYT1-204ENST00000457153 ANP32EQ9BTT0 268 aa18.74■□□□□ 0.59
SYT1-204ENST00000457153 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
SYT1-204ENST00000457153 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
SYT1-204ENST00000457153 NAIPQ13075 1403 aa18.74■□□□□ 0.59
SYT1-204ENST00000457153 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
SYT1-204ENST00000457153 URB2Q14146 1524 aaKnown RBP18.73■□□□□ 0.59
SYT1-204ENST00000457153 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
SYT1-204ENST00000457153 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
SYT1-204ENST00000457153 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
SYT1-204ENST00000457153 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
SYT1-204ENST00000457153 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
SYT1-204ENST00000457153 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
SYT1-204ENST00000457153 RALBP1Q15311 655 aa18.69■□□□□ 0.58
SYT1-204ENST00000457153 TMF1P82094 1093 aa18.69■□□□□ 0.58
SYT1-204ENST00000457153 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
SYT1-204ENST00000457153 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
SYT1-204ENST00000457153 KIAA0586Q9BVV6 1533 aa18.67■□□□□ 0.58
SYT1-204ENST00000457153 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
SYT1-204ENST00000457153 CCDC7Q96M83 1385 aa18.66■□□□□ 0.58
SYT1-204ENST00000457153 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
SYT1-204ENST00000457153 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
SYT1-204ENST00000457153 HNRNPMP52272 730 aaKnown RBP eCLIP18.65■□□□□ 0.58
SYT1-204ENST00000457153 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
SYT1-204ENST00000457153 ROCK1Q13464 1354 aa18.65■□□□□ 0.58
SYT1-204ENST00000457153 PTPRGP23470 1445 aa18.65■□□□□ 0.58
SYT1-204ENST00000457153 PTPN23Q9H3S7 1636 aa18.65■□□□□ 0.58
SYT1-204ENST00000457153 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
SYT1-204ENST00000457153 ZNF644Q9H582 1327 aaPredicted RBP18.64■□□□□ 0.57
SYT1-204ENST00000457153 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
SYT1-204ENST00000457153 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
SYT1-204ENST00000457153 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
SYT1-204ENST00000457153 NEFMP07197 916 aa18.63■□□□□ 0.57
SYT1-204ENST00000457153 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
SYT1-204ENST00000457153 KANK1Q14678 1352 aa18.63■□□□□ 0.57
SYT1-204ENST00000457153 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
SYT1-204ENST00000457153 USP47Q96K76 1375 aa18.62■□□□□ 0.57
SYT1-204ENST00000457153 WASHC2AQ641Q2 1341 aa18.61■□□□□ 0.57
SYT1-204ENST00000457153 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
SYT1-204ENST00000457153 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
SYT1-204ENST00000457153 DAPK1P53355 1430 aa18.6■□□□□ 0.57
SYT1-204ENST00000457153 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
SYT1-204ENST00000457153 AKNAQ7Z591 1439 aa18.59■□□□□ 0.57
SYT1-204ENST00000457153 KIF15Q9NS87 1388 aa18.59■□□□□ 0.57
SYT1-204ENST00000457153 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
SYT1-204ENST00000457153 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
SYT1-204ENST00000457153 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
SYT1-204ENST00000457153 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
SYT1-204ENST00000457153 CDK13Q14004 1512 aaKnown RBP18.56■□□□□ 0.56
SYT1-204ENST00000457153 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
SYT1-204ENST00000457153 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
SYT1-204ENST00000457153 CC2D1BQ5T0F9 858 aaKnown RBP18.54■□□□□ 0.56
SYT1-204ENST00000457153 KIAA1107Q9UPP5 1409 aa18.53■□□□□ 0.56
SYT1-204ENST00000457153 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
SYT1-204ENST00000457153 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.56
SYT1-204ENST00000457153 UGGT2Q9NYU1 1516 aa18.52■□□□□ 0.55
SYT1-204ENST00000457153 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
SYT1-204ENST00000457153 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
SYT1-204ENST00000457153 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
SYT1-204ENST00000457153 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
SYT1-204ENST00000457153 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
SYT1-204ENST00000457153 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
SYT1-204ENST00000457153 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
SYT1-204ENST00000457153 ANKRD30BQ9BXX2 1392 aa18.46■□□□□ 0.55
SYT1-204ENST00000457153 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
SYT1-204ENST00000457153 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
SYT1-204ENST00000457153 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
SYT1-204ENST00000457153 ABCC5O15440 1437 aa18.46■□□□□ 0.55
SYT1-204ENST00000457153 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
SYT1-204ENST00000457153 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
SYT1-204ENST00000457153 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
SYT1-204ENST00000457153 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
SYT1-204ENST00000457153 C9orf84Q5VXU9 1444 aa18.45■□□□□ 0.54
SYT1-204ENST00000457153 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
SYT1-204ENST00000457153 TCOF1Q13428 1488 aaKnown RBP18.44■□□□□ 0.54
SYT1-204ENST00000457153 STAC3Q96MF2 364 aa18.42■□□□□ 0.54
SYT1-204ENST00000457153 ESF1Q9H501 851 aaKnown RBP18.41■□□□□ 0.54
SYT1-204ENST00000457153 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
SYT1-204ENST00000457153 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
SYT1-204ENST00000457153 CAMSAP2Q08AD1 1489 aa18.4■□□□□ 0.54
SYT1-204ENST00000457153 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
SYT1-204ENST00000457153 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
SYT1-204ENST00000457153 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
SYT1-204ENST00000457153 SAMD9Q5K651 1589 aa18.38■□□□□ 0.53
SYT1-204ENST00000457153 NBR1Q14596 966 aa18.38■□□□□ 0.53
SYT1-204ENST00000457153 PLEKHH2Q8IVE3 1493 aa18.37■□□□□ 0.53
SYT1-204ENST00000457153 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
SYT1-204ENST00000457153 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
SYT1-204ENST00000457153 BRD4O60885 1362 aaPredicted RBP18.36■□□□□ 0.53
SYT1-204ENST00000457153 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
SYT1-204ENST00000457153 TCERG1O14776 1098 aaKnown RBP18.35■□□□□ 0.53
SYT1-204ENST00000457153 KIF3BO15066 747 aa18.35■□□□□ 0.53
SYT1-204ENST00000457153 PLB1Q6P1J6 1458 aa18.33■□□□□ 0.53
SYT1-204ENST00000457153 PANK3Q9H999 370 aa18.33■□□□□ 0.52
SYT1-204ENST00000457153 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.52
SYT1-204ENST00000457153 RAPGEF6Q8TEU7 1601 aa18.32■□□□□ 0.52
SYT1-204ENST00000457153 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
SYT1-204ENST00000457153 WDR62O43379 1518 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms