RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 HAX1O00165 279 aa12.42□□□□□ -0.42
LSMEM1-203ENST00000455302 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
LSMEM1-203ENST00000455302 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
LSMEM1-203ENST00000455302 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.43
LSMEM1-203ENST00000455302 PRDM2Q13029 1718 aa12.4□□□□□ -0.43
LSMEM1-203ENST00000455302 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
LSMEM1-203ENST00000455302 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
LSMEM1-203ENST00000455302 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
LSMEM1-203ENST00000455302 SOX12O15370 315 aa12.35□□□□□ -0.43
LSMEM1-203ENST00000455302 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
LSMEM1-203ENST00000455302 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
LSMEM1-203ENST00000455302 NLRP6P59044 892 aa12.34□□□□□ -0.43
LSMEM1-203ENST00000455302 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
LSMEM1-203ENST00000455302 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
LSMEM1-203ENST00000455302 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
LSMEM1-203ENST00000455302 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
LSMEM1-203ENST00000455302 EVX2Q03828 476 aa12.32□□□□□ -0.44
LSMEM1-203ENST00000455302 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
LSMEM1-203ENST00000455302 SYNJ1O43426 1573 aa12.31□□□□□ -0.44
LSMEM1-203ENST00000455302 SOGA1O94964 1423 aa12.31□□□□□ -0.44
LSMEM1-203ENST00000455302 MAP3K13O43283 966 aa12.31□□□□□ -0.44
LSMEM1-203ENST00000455302 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
LSMEM1-203ENST00000455302 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
LSMEM1-203ENST00000455302 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
LSMEM1-203ENST00000455302 EFCAB3Q8N7B9 438 aa12.28□□□□□ -0.44
LSMEM1-203ENST00000455302 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.44
LSMEM1-203ENST00000455302 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.45
LSMEM1-203ENST00000455302 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
LSMEM1-203ENST00000455302 SYNJ2O15056 1496 aa12.24□□□□□ -0.45
LSMEM1-203ENST00000455302 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
LSMEM1-203ENST00000455302 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
LSMEM1-203ENST00000455302 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
LSMEM1-203ENST00000455302 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
LSMEM1-203ENST00000455302 FGD5Q6ZNL6 1462 aa12.22□□□□□ -0.45
LSMEM1-203ENST00000455302 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
LSMEM1-203ENST00000455302 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
LSMEM1-203ENST00000455302 PPP1R37O75864 691 aa12.2□□□□□ -0.46
LSMEM1-203ENST00000455302 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
LSMEM1-203ENST00000455302 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
LSMEM1-203ENST00000455302 E2F4Q16254 413 aa12.2□□□□□ -0.46
LSMEM1-203ENST00000455302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.17□□□□□ -0.46
LSMEM1-203ENST00000455302 PDE4AP27815 886 aa12.16□□□□□ -0.46
LSMEM1-203ENST00000455302 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
LSMEM1-203ENST00000455302 CLCN6P51797 869 aa12.14□□□□□ -0.47
LSMEM1-203ENST00000455302 CUX1P39880 1505 aa12.12□□□□□ -0.47
LSMEM1-203ENST00000455302 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
LSMEM1-203ENST00000455302 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
LSMEM1-203ENST00000455302 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
LSMEM1-203ENST00000455302 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
LSMEM1-203ENST00000455302 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
LSMEM1-203ENST00000455302 GABBR2O75899 941 aa12.09□□□□□ -0.47
LSMEM1-203ENST00000455302 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
LSMEM1-203ENST00000455302 GRIN2AQ12879 1464 aa12.08□□□□□ -0.48
LSMEM1-203ENST00000455302 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
LSMEM1-203ENST00000455302 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
LSMEM1-203ENST00000455302 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
LSMEM1-203ENST00000455302 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
LSMEM1-203ENST00000455302 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
LSMEM1-203ENST00000455302 MFSD10Q14728 455 aa12.04□□□□□ -0.48
LSMEM1-203ENST00000455302 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
LSMEM1-203ENST00000455302 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
LSMEM1-203ENST00000455302 NUP160Q12769 1436 aa12.03□□□□□ -0.48
LSMEM1-203ENST00000455302 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
LSMEM1-203ENST00000455302 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
LSMEM1-203ENST00000455302 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
LSMEM1-203ENST00000455302 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
LSMEM1-203ENST00000455302 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.49
LSMEM1-203ENST00000455302 TIE1P35590 1138 aa12.01□□□□□ -0.49
LSMEM1-203ENST00000455302 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
LSMEM1-203ENST00000455302 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
LSMEM1-203ENST00000455302 SEMA3EO15041 775 aa12□□□□□ -0.49
LSMEM1-203ENST00000455302 MS4A3Q96HJ5 214 aa12□□□□□ -0.49
LSMEM1-203ENST00000455302 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
LSMEM1-203ENST00000455302 PRG4Q92954 1404 aaPredicted RBP11.99□□□□□ -0.49
LSMEM1-203ENST00000455302 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
LSMEM1-203ENST00000455302 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
LSMEM1-203ENST00000455302 KIF13AQ9H1H9 1805 aa11.99□□□□□ -0.49
LSMEM1-203ENST00000455302 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
LSMEM1-203ENST00000455302 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
LSMEM1-203ENST00000455302 GTF3C3Q9Y5Q9 886 aa11.97□□□□□ -0.49
LSMEM1-203ENST00000455302 ZC3H15Q8WU90 426 aaKnown RBP11.96□□□□□ -0.49
LSMEM1-203ENST00000455302 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
LSMEM1-203ENST00000455302 CAMK2BQ13554 666 aa11.95□□□□□ -0.5
LSMEM1-203ENST00000455302 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
LSMEM1-203ENST00000455302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.5
LSMEM1-203ENST00000455302 KDM6BO15054 1643 aa11.93□□□□□ -0.5
LSMEM1-203ENST00000455302 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
LSMEM1-203ENST00000455302 MAPKBP1O60336 1514 aa11.92□□□□□ -0.5
LSMEM1-203ENST00000455302 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
LSMEM1-203ENST00000455302 DIP2BQ9P265 1576 aa11.92□□□□□ -0.5
LSMEM1-203ENST00000455302 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
LSMEM1-203ENST00000455302 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
LSMEM1-203ENST00000455302 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
LSMEM1-203ENST00000455302 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
LSMEM1-203ENST00000455302 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
LSMEM1-203ENST00000455302 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
LSMEM1-203ENST00000455302 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
LSMEM1-203ENST00000455302 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
LSMEM1-203ENST00000455302 ZMYND10O75800 440 aa11.84□□□□□ -0.51
LSMEM1-203ENST00000455302 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms