RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 CFTRP13569 1480 aa22.98■■□□□ 1.27
TCF3-204ENST00000453954 BRPF3Q9ULD4 1205 aa22.97■■□□□ 1.27
TCF3-204ENST00000453954 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
TCF3-204ENST00000453954 NAIPQ13075 1403 aa22.96■■□□□ 1.27
TCF3-204ENST00000453954 FBLN2P98095 1184 aa22.94■■□□□ 1.26
TCF3-204ENST00000453954 CDCA7LQ96GN5 454 aa22.94■■□□□ 1.26
TCF3-204ENST00000453954 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
TCF3-204ENST00000453954 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
TCF3-204ENST00000453954 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
TCF3-204ENST00000453954 PKD2Q13563 968 aa22.9■■□□□ 1.26
TCF3-204ENST00000453954 HFM1A2PYH4 1435 aa22.89■■□□□ 1.25
TCF3-204ENST00000453954 DCAF11Q8TEB1 546 aa22.88■■□□□ 1.25
TCF3-204ENST00000453954 RRP1P56182 461 aaKnown RBP22.87■■□□□ 1.25
TCF3-204ENST00000453954 NCOA2Q15596 1464 aa22.87■■□□□ 1.25
TCF3-204ENST00000453954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.87■■□□□ 1.25
TCF3-204ENST00000453954 ST20-MTHFSA0A0A6YYL1 179 aa22.86■■□□□ 1.25
TCF3-204ENST00000453954 MYOM3Q5VTT5 1437 aa22.83■■□□□ 1.25
TCF3-204ENST00000453954 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
TCF3-204ENST00000453954 CASKIN1Q8WXD9 1431 aa22.82■■□□□ 1.24
TCF3-204ENST00000453954 NESP48681 1621 aa22.81■■□□□ 1.24
TCF3-204ENST00000453954 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
TCF3-204ENST00000453954 PPM1GO15355 546 aaPredicted RBP22.8■■□□□ 1.24
TCF3-204ENST00000453954 USP47Q96K76 1375 aa22.8■■□□□ 1.24
TCF3-204ENST00000453954 TCERG1O14776 1098 aaKnown RBP22.8■■□□□ 1.24
TCF3-204ENST00000453954 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
TCF3-204ENST00000453954 CFDP1Q9UEE9 299 aaPredicted RBP22.78■■□□□ 1.24
TCF3-204ENST00000453954 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
TCF3-204ENST00000453954 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
TCF3-204ENST00000453954 SPRYD3Q8NCJ5 442 aa22.73■■□□□ 1.23
TCF3-204ENST00000453954 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
TCF3-204ENST00000453954 NCOA1Q15788 1441 aa22.72■■□□□ 1.23
TCF3-204ENST00000453954 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
TCF3-204ENST00000453954 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
TCF3-204ENST00000453954 BACH2Q9BYV9 841 aa22.71■■□□□ 1.23
TCF3-204ENST00000453954 NFKBIBQ15653 356 aa22.7■■□□□ 1.23
TCF3-204ENST00000453954 FRAT1Q92837 279 aaPredicted RBP22.7■■□□□ 1.23
TCF3-204ENST00000453954 SLKQ9H2G2 1235 aaPredicted RBP22.7■■□□□ 1.22
TCF3-204ENST00000453954 C20orf194Q5TEA3 1177 aa22.69■■□□□ 1.22
TCF3-204ENST00000453954 GSE1Q14687 1217 aa22.68■■□□□ 1.22
TCF3-204ENST00000453954 DDRGK1Q96HY6 314 aa22.68■■□□□ 1.22
TCF3-204ENST00000453954 MAP3K1Q13233 1512 aa22.66■■□□□ 1.22
TCF3-204ENST00000453954 FRAT2O75474 233 aaPredicted RBP22.64■■□□□ 1.22
TCF3-204ENST00000453954 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
TCF3-204ENST00000453954 NEUROD2Q15784 382 aa22.64■■□□□ 1.21
TCF3-204ENST00000453954 CCDC146Q8IYE0 955 aa22.63■■□□□ 1.21
TCF3-204ENST00000453954 MYBBP1AQ9BQG0 1328 aaKnown RBP22.62■■□□□ 1.21
TCF3-204ENST00000453954 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
TCF3-204ENST00000453954 NUP155O75694 1391 aa22.59■■□□□ 1.21
TCF3-204ENST00000453954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.58■■□□□ 1.216e-10■■■■■ 33.2
TCF3-204ENST00000453954 GZF1Q9H116 711 aaPredicted RBP22.58■■□□□ 1.21
TCF3-204ENST00000453954 NLRP13Q86W25 1043 aa22.58■■□□□ 1.21
TCF3-204ENST00000453954 ARID4BQ4LE39 1312 aaPredicted RBP22.58■■□□□ 1.2
TCF3-204ENST00000453954 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
TCF3-204ENST00000453954 TSPY4P0CV99 314 aa22.56■■□□□ 1.2
TCF3-204ENST00000453954 TSPY10P0CW01 314 aa22.56■■□□□ 1.2
TCF3-204ENST00000453954 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
TCF3-204ENST00000453954 KIF15Q9NS87 1388 aa22.55■■□□□ 1.2
TCF3-204ENST00000453954 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
TCF3-204ENST00000453954 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
TCF3-204ENST00000453954 PANK3Q9H999 370 aa22.54■■□□□ 1.2
TCF3-204ENST00000453954 RALBP1Q15311 655 aa22.54■■□□□ 1.2
TCF3-204ENST00000453954 CDK13Q14004 1512 aaKnown RBP22.54■■□□□ 1.2
TCF3-204ENST00000453954 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
TCF3-204ENST00000453954 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
TCF3-204ENST00000453954 KDM6BO15054 1643 aa22.52■■□□□ 1.2
TCF3-204ENST00000453954 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
TCF3-204ENST00000453954 DHX29Q7Z478 1369 aaKnown RBP22.51■■□□□ 1.19
TCF3-204ENST00000453954 CFAP43Q8NDM7 1665 aa22.48■■□□□ 1.19
TCF3-204ENST00000453954 ADAMTS8Q9UP79 889 aa22.48■■□□□ 1.19
TCF3-204ENST00000453954 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.199e-9■■■■■ 30
TCF3-204ENST00000453954 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
TCF3-204ENST00000453954 MS4A1P11836 297 aa22.47■■□□□ 1.19
TCF3-204ENST00000453954 KNSTRNQ9Y448 316 aa22.45■■□□□ 1.18
TCF3-204ENST00000453954 KDM5BQ9UGL1 1544 aa22.45■■□□□ 1.18
TCF3-204ENST00000453954 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
TCF3-204ENST00000453954 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
TCF3-204ENST00000453954 FAM161AQ3B820 660 aa22.43■■□□□ 1.18
TCF3-204ENST00000453954 NAP1L5Q96NT1 182 aaPredicted RBP22.42■■□□□ 1.18
TCF3-204ENST00000453954 BCL2L13Q9BXK5 485 aa22.42■■□□□ 1.18
TCF3-204ENST00000453954 RPRD2Q5VT52 1461 aaKnown RBP22.42■■□□□ 1.18
TCF3-204ENST00000453954 RNF123Q5XPI4 1314 aa22.41■■□□□ 1.18
TCF3-204ENST00000453954 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
TCF3-204ENST00000453954 CLUAP1Q96AJ1 413 aa22.4■■□□□ 1.18
TCF3-204ENST00000453954 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
TCF3-204ENST00000453954 EFCAB5A4FU69 1503 aa22.4■■□□□ 1.18
TCF3-204ENST00000453954 POGKQ9P215 609 aa22.39■■□□□ 1.18
TCF3-204ENST00000453954 SUPT6HQ7KZ85 1726 aaKnown RBP22.39■■□□□ 1.18
TCF3-204ENST00000453954 PDE3BQ13370 1112 aa22.38■■□□□ 1.17
TCF3-204ENST00000453954 BCAR3O75815 825 aa22.38■■□□□ 1.17
TCF3-204ENST00000453954 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
TCF3-204ENST00000453954 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
TCF3-204ENST00000453954 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
TCF3-204ENST00000453954 RRP7AQ9Y3A4 280 aaKnown RBP22.37■■□□□ 1.17
TCF3-204ENST00000453954 COG6Q9Y2V7 657 aa22.37■■□□□ 1.17
TCF3-204ENST00000453954 DAPK1P53355 1430 aa22.36■■□□□ 1.17
TCF3-204ENST00000453954 APAF1O14727 1248 aa22.35■■□□□ 1.17
TCF3-204ENST00000453954 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
TCF3-204ENST00000453954 PLEKHD1A6NEE1 506 aa22.35■■□□□ 1.17
TCF3-204ENST00000453954 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
TCF3-204ENST00000453954 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms