RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
UBP1-204ENST00000447368 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
UBP1-204ENST00000447368 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
UBP1-204ENST00000447368 TMC1Q8TDI8 760 aa17.11■□□□□ 0.33
UBP1-204ENST00000447368 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
UBP1-204ENST00000447368 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
UBP1-204ENST00000447368 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
UBP1-204ENST00000447368 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
UBP1-204ENST00000447368 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
UBP1-204ENST00000447368 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
UBP1-204ENST00000447368 NEFMP07197 916 aa17.08■□□□□ 0.32
UBP1-204ENST00000447368 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
UBP1-204ENST00000447368 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
UBP1-204ENST00000447368 CUL7Q14999 1698 aa17.05■□□□□ 0.32
UBP1-204ENST00000447368 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
UBP1-204ENST00000447368 PKD2Q13563 968 aa17.05■□□□□ 0.32
UBP1-204ENST00000447368 EHBP1L1Q8N3D4 1523 aa17.04■□□□□ 0.32
UBP1-204ENST00000447368 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
UBP1-204ENST00000447368 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
UBP1-204ENST00000447368 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
UBP1-204ENST00000447368 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
UBP1-204ENST00000447368 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
UBP1-204ENST00000447368 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.32
UBP1-204ENST00000447368 EPRSP07814 1512 aaKnown RBP16.97■□□□□ 0.31
UBP1-204ENST00000447368 RGL3Q3MIN7 710 aa16.97■□□□□ 0.31
UBP1-204ENST00000447368 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
UBP1-204ENST00000447368 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
UBP1-204ENST00000447368 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
UBP1-204ENST00000447368 MAGI3Q5TCQ9 1506 aa16.96■□□□□ 0.31
UBP1-204ENST00000447368 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
UBP1-204ENST00000447368 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.31
UBP1-204ENST00000447368 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
UBP1-204ENST00000447368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.37e-7■■■□□ 15.8
UBP1-204ENST00000447368 NUDCQ9Y266 331 aa16.94■□□□□ 0.3
UBP1-204ENST00000447368 USP47Q96K76 1375 aa16.94■□□□□ 0.3
UBP1-204ENST00000447368 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
UBP1-204ENST00000447368 NCOA1Q15788 1441 aa16.94■□□□□ 0.3
UBP1-204ENST00000447368 KDM6BO15054 1643 aa16.93■□□□□ 0.3
UBP1-204ENST00000447368 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
UBP1-204ENST00000447368 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
UBP1-204ENST00000447368 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
UBP1-204ENST00000447368 UBE2Q2Q8WVN8 375 aa16.92■□□□□ 0.3
UBP1-204ENST00000447368 ARXQ96QS3 562 aa16.91■□□□□ 0.3
UBP1-204ENST00000447368 DAPK1P53355 1430 aa16.91■□□□□ 0.3
UBP1-204ENST00000447368 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
UBP1-204ENST00000447368 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
UBP1-204ENST00000447368 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
UBP1-204ENST00000447368 NUP155O75694 1391 aa16.9■□□□□ 0.3
UBP1-204ENST00000447368 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
UBP1-204ENST00000447368 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
UBP1-204ENST00000447368 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
UBP1-204ENST00000447368 ABCC5O15440 1437 aa16.88■□□□□ 0.29
UBP1-204ENST00000447368 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
UBP1-204ENST00000447368 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
UBP1-204ENST00000447368 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
UBP1-204ENST00000447368 PRG4Q92954 1404 aaPredicted RBP16.86■□□□□ 0.29
UBP1-204ENST00000447368 LRRIQ1Q96JM4 1722 aa16.85■□□□□ 0.29
UBP1-204ENST00000447368 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
UBP1-204ENST00000447368 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
UBP1-204ENST00000447368 IQGAP2Q13576 1575 aa16.84■□□□□ 0.29
UBP1-204ENST00000447368 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■■■□ 26.3
UBP1-204ENST00000447368 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
UBP1-204ENST00000447368 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
UBP1-204ENST00000447368 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
UBP1-204ENST00000447368 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
UBP1-204ENST00000447368 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
UBP1-204ENST00000447368 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
UBP1-204ENST00000447368 PKNOX2Q96KN3 472 aa16.8■□□□□ 0.28
UBP1-204ENST00000447368 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
UBP1-204ENST00000447368 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
UBP1-204ENST00000447368 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
UBP1-204ENST00000447368 PLIN1O60240 522 aa16.77■□□□□ 0.28
UBP1-204ENST00000447368 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
UBP1-204ENST00000447368 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
UBP1-204ENST00000447368 ANKRD50Q9ULJ7 1429 aa16.76■□□□□ 0.27
UBP1-204ENST00000447368 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
UBP1-204ENST00000447368 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
UBP1-204ENST00000447368 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
UBP1-204ENST00000447368 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
UBP1-204ENST00000447368 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
UBP1-204ENST00000447368 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
UBP1-204ENST00000447368 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
UBP1-204ENST00000447368 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
UBP1-204ENST00000447368 RRP1P56182 461 aaKnown RBP16.73■□□□□ 0.27
UBP1-204ENST00000447368 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
UBP1-204ENST00000447368 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
UBP1-204ENST00000447368 RALBP1Q15311 655 aa16.72■□□□□ 0.27
UBP1-204ENST00000447368 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
UBP1-204ENST00000447368 WDR62O43379 1518 aa16.72■□□□□ 0.27
UBP1-204ENST00000447368 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
UBP1-204ENST00000447368 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
UBP1-204ENST00000447368 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
UBP1-204ENST00000447368 CAMSAP2Q08AD1 1489 aa16.71■□□□□ 0.27
UBP1-204ENST00000447368 TROQ12816 1431 aaPredicted RBP16.71■□□□□ 0.27
UBP1-204ENST00000447368 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.26
UBP1-204ENST00000447368 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
UBP1-204ENST00000447368 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
UBP1-204ENST00000447368 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
UBP1-204ENST00000447368 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
UBP1-204ENST00000447368 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms