RNA–Protein interactions for RNA: ENST00000421212.1

LINC01249-202, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 3

Gene LINC01249, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-202ENST00000421212 CADPSQ9ULU8 1353 aa7.63□□□□□ -1.19
LINC01249-202ENST00000421212 RIMBP2O15034 1052 aa7.63□□□□□ -1.19
LINC01249-202ENST00000421212 G3V3G9 751 aa7.62□□□□□ -1.19
LINC01249-202ENST00000421212 VARS2Q5ST30 1063 aaKnown RBP7.62□□□□□ -1.19
LINC01249-202ENST00000421212 DCAF8Q5TAQ9 597 aa7.62□□□□□ -1.19
LINC01249-202ENST00000421212 PLA2G2EQ9NZK7 142 aa7.62□□□□□ -1.19
LINC01249-202ENST00000421212 RIMBP3CA6NJZ7 1639 aa7.61□□□□□ -1.19
LINC01249-202ENST00000421212 RIMBP3BA6NNM3 1639 aa7.61□□□□□ -1.19
LINC01249-202ENST00000421212 RIMBP3Q9UFD9 1639 aa7.61□□□□□ -1.19
LINC01249-202ENST00000421212 NUBP1P53384 320 aa7.61□□□□□ -1.19
LINC01249-202ENST00000421212 HOXB3P14651 431 aaPredicted RBP7.6□□□□□ -1.19
LINC01249-202ENST00000421212 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
LINC01249-202ENST00000421212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC01249-202ENST00000421212 CEP164Q9UPV0 1460 aa7.57□□□□□ -1.2
LINC01249-202ENST00000421212 RSF1Q96T23 1441 aaPredicted RBP7.56□□□□□ -1.2
LINC01249-202ENST00000421212 ARHGEF11O15085 1522 aa7.56□□□□□ -1.2
LINC01249-202ENST00000421212 FANCD2Q9BXW9 1451 aa7.55□□□□□ -1.2
LINC01249-202ENST00000421212 URB2Q14146 1524 aaKnown RBP7.55□□□□□ -1.2
LINC01249-202ENST00000421212 ANKRD13DQ6ZTN6 518 aa7.54□□□□□ -1.2
LINC01249-202ENST00000421212 PCDHB8Q9UN66 801 aa7.54□□□□□ -1.2
LINC01249-202ENST00000421212 WIZO95785 1651 aa7.54□□□□□ -1.2
LINC01249-202ENST00000421212 PYGBP11216 843 aa7.52□□□□□ -1.21
LINC01249-202ENST00000421212 TOP2AP11388 1531 aaKnown RBP7.52□□□□□ -1.21
LINC01249-202ENST00000421212 ZNF608Q9ULD9 1512 aaPredicted RBP7.52□□□□□ -1.21
LINC01249-202ENST00000421212 CFTRP13569 1480 aa7.51□□□□□ -1.21
LINC01249-202ENST00000421212 HCSTQ9UBK5 93 aa7.51□□□□□ -1.21
LINC01249-202ENST00000421212 ZSWIM6Q9HCJ5 1215 aa7.5□□□□□ -1.21
LINC01249-202ENST00000421212 ARAP1Q96P48 1450 aa7.49□□□□□ -1.21
LINC01249-202ENST00000421212 ZNF467Q7Z7K2 595 aaPredicted RBP7.48□□□□□ -1.21
LINC01249-202ENST00000421212 BOLA1Q9Y3E2 137 aa7.48□□□□□ -1.21
LINC01249-202ENST00000421212 CYB5RLQ6IPT4 315 aa7.47□□□□□ -1.21
LINC01249-202ENST00000421212 LSM11P83369 360 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC01249-202ENST00000421212 IRX2Q9BZI1 471 aaPredicted RBP7.45□□□□□ -1.22
LINC01249-202ENST00000421212 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
LINC01249-202ENST00000421212 CHD1O14646 1710 aa7.44□□□□□ -1.22
LINC01249-202ENST00000421212 IFT140Q96RY7 1462 aa7.43□□□□□ -1.22
LINC01249-202ENST00000421212 ILDR1Q86SU0 546 aaPredicted RBP7.42□□□□□ -1.22
LINC01249-202ENST00000421212 PRDM2Q13029 1718 aa7.41□□□□□ -1.22
LINC01249-202ENST00000421212 SUPT5HO00267 1087 aaKnown RBP7.41□□□□□ -1.22
LINC01249-202ENST00000421212 RGS20O76081 388 aa7.41□□□□□ -1.22
LINC01249-202ENST00000421212 DPY19L2Q6NUT2 758 aa7.41□□□□□ -1.22
LINC01249-202ENST00000421212 CCDC88BA6NC98 1476 aa7.4□□□□□ -1.22
LINC01249-202ENST00000421212 TOPBP1Q92547 1522 aa7.4□□□□□ -1.22
LINC01249-202ENST00000421212 CSRNP3Q8WYN3 585 aa7.39□□□□□ -1.23
LINC01249-202ENST00000421212 TARBP1Q13395 1621 aaKnown RBP7.38□□□□□ -1.23
LINC01249-202ENST00000421212 AQRO60306 1485 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC01249-202ENST00000421212 PSEN1P49768 467 aa7.38□□□□□ -1.23
LINC01249-202ENST00000421212 GPR153Q6NV75 609 aa7.37□□□□□ -1.23
LINC01249-202ENST00000421212 PBX2P40425 430 aa7.36□□□□□ -1.23
LINC01249-202ENST00000421212 CLASP1Q7Z460 1538 aa7.36□□□□□ -1.23
LINC01249-202ENST00000421212 DNMBPQ6XZF7 1577 aa7.34□□□□□ -1.23
LINC01249-202ENST00000421212 ZNF316A6NFI3 1004 aaPredicted RBP7.34□□□□□ -1.23
LINC01249-202ENST00000421212 POLA1P09884 1462 aaPredicted RBP7.31□□□□□ -1.24
LINC01249-202ENST00000421212 ABCC8Q09428 1581 aa7.31□□□□□ -1.24
LINC01249-202ENST00000421212 GSE1Q14687 1217 aa7.31□□□□□ -1.24
LINC01249-202ENST00000421212 RAD54L2Q9Y4B4 1467 aa7.3□□□□□ -1.24
LINC01249-202ENST00000421212 PDAP1Q13442 181 aaKnown RBP7.3□□□□□ -1.24
LINC01249-202ENST00000421212 CABP2Q9NPB3 220 aa7.3□□□□□ -1.24
LINC01249-202ENST00000421212 SNAPC4Q5SXM2 1469 aa7.3□□□□□ -1.24
LINC01249-202ENST00000421212 ARSIQ5FYB1 569 aa7.29□□□□□ -1.24
LINC01249-202ENST00000421212 TDRD9Q8NDG6 1382 aaKnown RBP7.28□□□□□ -1.24
LINC01249-202ENST00000421212 CHRM1P11229 460 aaPredicted RBP7.27□□□□□ -1.25
LINC01249-202ENST00000421212 ERCC6L2Q5T890 1561 aa7.26□□□□□ -1.25
LINC01249-202ENST00000421212 GAPVD1Q14C86 1478 aa7.26□□□□□ -1.25
LINC01249-202ENST00000421212 SYNJ1O43426 1573 aa7.25□□□□□ -1.25
LINC01249-202ENST00000421212 Q6ZNB5 142 aa7.24□□□□□ -1.25
LINC01249-202ENST00000421212 MAGI1Q96QZ7 1491 aaPredicted RBP7.24□□□□□ -1.25
LINC01249-202ENST00000421212 ADGRD1Q6QNK2 874 aa7.23□□□□□ -1.25
LINC01249-202ENST00000421212 SYNJ2O15056 1496 aa7.23□□□□□ -1.25
LINC01249-202ENST00000421212 FGD5Q6ZNL6 1462 aa7.23□□□□□ -1.25
LINC01249-202ENST00000421212 SOGA1O94964 1423 aa7.22□□□□□ -1.25
LINC01249-202ENST00000421212 IFFO2Q5TF58 517 aa7.22□□□□□ -1.25
LINC01249-202ENST00000421212 WDR97A6NE52 1622 aa7.22□□□□□ -1.25
LINC01249-202ENST00000421212 KIF13AQ9H1H9 1805 aa7.22□□□□□ -1.25
LINC01249-202ENST00000421212 MICALL2Q8IY33 904 aa7.21□□□□□ -1.26
LINC01249-202ENST00000421212 GRIN2BQ13224 1484 aa7.2□□□□□ -1.26
LINC01249-202ENST00000421212 TMEM92Q6UXU6 159 aa7.2□□□□□ -1.26
LINC01249-202ENST00000421212 CHMP7Q8WUX9 453 aaPredicted RBP7.2□□□□□ -1.26
LINC01249-202ENST00000421212 STAC3Q96MF2 364 aa7.2□□□□□ -1.26
LINC01249-202ENST00000421212 AXIN2Q9Y2T1 843 aa7.2□□□□□ -1.26
LINC01249-202ENST00000421212 CUX1P39880 1505 aa7.2□□□□□ -1.26
LINC01249-202ENST00000421212 PBRM1Q86U86 1689 aa7.19□□□□□ -1.26
LINC01249-202ENST00000421212 KCTD12Q96CX2 325 aaKnown RBP7.19□□□□□ -1.26
LINC01249-202ENST00000421212 WRNQ14191 1432 aaPredicted RBP eCLIP7.18□□□□□ -1.26
LINC01249-202ENST00000421212 A0A0G2JS52 829 aa7.18□□□□□ -1.26
LINC01249-202ENST00000421212 KHSRPQ92945 711 aaKnown RBP eCLIP7.18□□□□□ -1.26
LINC01249-202ENST00000421212 CEP170Q5SW79 1584 aa7.16□□□□□ -1.26
LINC01249-202ENST00000421212 ABCA5Q8WWZ7 1642 aa7.16□□□□□ -1.26
LINC01249-202ENST00000421212 TK2O00142 265 aa7.16□□□□□ -1.26
LINC01249-202ENST00000421212 ARHGAP33O14559 1287 aa7.16□□□□□ -1.26
LINC01249-202ENST00000421212 KDM4FA0A1W2PPD8 638 aa7.15□□□□□ -1.26
LINC01249-202ENST00000421212 SHROOM2Q13796 1616 aa7.15□□□□□ -1.27
LINC01249-202ENST00000421212 GRIN2AQ12879 1464 aa7.14□□□□□ -1.27
LINC01249-202ENST00000421212 POTEEQ6S8J3 1075 aa7.14□□□□□ -1.27
LINC01249-202ENST00000421212 NUP160Q12769 1436 aa7.13□□□□□ -1.27
LINC01249-202ENST00000421212 NUDT7P0C024 238 aa7.13□□□□□ -1.27
LINC01249-202ENST00000421212 ADAMTS12P58397 1594 aa7.12□□□□□ -1.27
LINC01249-202ENST00000421212 ABCA10Q8WWZ4 1543 aa7.12□□□□□ -1.27
LINC01249-202ENST00000421212 TOP2BQ02880 1626 aa7.12□□□□□ -1.27
LINC01249-202ENST00000421212 PSDA5PKW4 1024 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms