RNA–Protein interactions for RNA: ENST00000412678.6

CDHR4-202, Transcript of cadherin related family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR4, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-202ENST00000412678 RRP9O43818 475 aaKnown RBP15.22■□□□□ 0.03
CDHR4-202ENST00000412678 PDE4AP27815 886 aa15.21■□□□□ 0.03
CDHR4-202ENST00000412678 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
CDHR4-202ENST00000412678 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
CDHR4-202ENST00000412678 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.02
CDHR4-202ENST00000412678 EIF4G2P78344 907 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDHR4-202ENST00000412678 BACH2Q9BYV9 841 aa15.2■□□□□ 0.02
CDHR4-202ENST00000412678 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
CDHR4-202ENST00000412678 KDM5BQ9UGL1 1544 aa15.2■□□□□ 0.02
CDHR4-202ENST00000412678 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
CDHR4-202ENST00000412678 NUDCQ9Y266 331 aa15.18■□□□□ 0.02
CDHR4-202ENST00000412678 NCOA2Q15596 1464 aa15.18■□□□□ 0.02
CDHR4-202ENST00000412678 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
CDHR4-202ENST00000412678 UACAQ9BZF9 1416 aa15.16■□□□□ 0.02
CDHR4-202ENST00000412678 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
CDHR4-202ENST00000412678 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
CDHR4-202ENST00000412678 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDHR4-202ENST00000412678 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
CDHR4-202ENST00000412678 HSP90AA1P07900 732 aaKnown RBP15.12■□□□□ 0.01
CDHR4-202ENST00000412678 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
CDHR4-202ENST00000412678 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
CDHR4-202ENST00000412678 CFAP43Q8NDM7 1665 aa15.12■□□□□ 0.01
CDHR4-202ENST00000412678 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
CDHR4-202ENST00000412678 PCF11O94913 1555 aaKnown RBP15.11■□□□□ 0.01
CDHR4-202ENST00000412678 IGF1RP08069 1367 aa15.1■□□□□ 0.01
CDHR4-202ENST00000412678 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
CDHR4-202ENST00000412678 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
CDHR4-202ENST00000412678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDHR4-202ENST00000412678 PTPN23Q9H3S7 1636 aa15.08■□□□□ 0.01
CDHR4-202ENST00000412678 RRAGDQ9NQL2 400 aaPredicted RBP15.08■□□□□ 0
CDHR4-202ENST00000412678 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
CDHR4-202ENST00000412678 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
CDHR4-202ENST00000412678 EXOC6Q8TAG9 804 aa15.06■□□□□ 0
CDHR4-202ENST00000412678 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
CDHR4-202ENST00000412678 NAIPQ13075 1403 aa15.05■□□□□ 0
CDHR4-202ENST00000412678 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ 0
CDHR4-202ENST00000412678 NAP1L5Q96NT1 182 aaPredicted RBP15.05■□□□□ 0
CDHR4-202ENST00000412678 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
CDHR4-202ENST00000412678 L1TD1Q5T7N2 865 aaKnown RBP15.05■□□□□ -0
CDHR4-202ENST00000412678 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
CDHR4-202ENST00000412678 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
CDHR4-202ENST00000412678 SLC4A3P48751 1232 aa15.03■□□□□ -0
CDHR4-202ENST00000412678 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
CDHR4-202ENST00000412678 GRIN2BQ13224 1484 aa15.02■□□□□ -0
CDHR4-202ENST00000412678 RRP7BPQ9NSQ0 103 aa15.02■□□□□ -0
CDHR4-202ENST00000412678 POLR3GLQ9BT43 218 aa15.02□□□□□ -0.01
CDHR4-202ENST00000412678 FOXD1Q16676 465 aa15.01□□□□□ -0.01
CDHR4-202ENST00000412678 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
CDHR4-202ENST00000412678 FMN1Q68DA7 1419 aa15.01□□□□□ -0.01
CDHR4-202ENST00000412678 CLCN1P35523 988 aa15.01□□□□□ -0.01
CDHR4-202ENST00000412678 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
CDHR4-202ENST00000412678 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
CDHR4-202ENST00000412678 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
CDHR4-202ENST00000412678 CUL7Q14999 1698 aa14.99□□□□□ -0.01
CDHR4-202ENST00000412678 RRP1P56182 461 aaKnown RBP14.99□□□□□ -0.01
CDHR4-202ENST00000412678 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
CDHR4-202ENST00000412678 CENPJQ9HC77 1338 aaPredicted RBP14.98□□□□□ -0.01
CDHR4-202ENST00000412678 DENND4BO75064 1496 aaPredicted RBP14.97□□□□□ -0.01
CDHR4-202ENST00000412678 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
CDHR4-202ENST00000412678 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
CDHR4-202ENST00000412678 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
CDHR4-202ENST00000412678 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
CDHR4-202ENST00000412678 PNISRQ8TF01 805 aaKnown RBP14.94□□□□□ -0.02
CDHR4-202ENST00000412678 TMC1Q8TDI8 760 aa14.94□□□□□ -0.02
CDHR4-202ENST00000412678 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
CDHR4-202ENST00000412678 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
CDHR4-202ENST00000412678 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
CDHR4-202ENST00000412678 AAMPQ13685 434 aa14.93□□□□□ -0.02
CDHR4-202ENST00000412678 MPHOSPH9Q99550 1183 aa14.93□□□□□ -0.02
CDHR4-202ENST00000412678 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
CDHR4-202ENST00000412678 PDCL3Q9H2J4 239 aa14.92□□□□□ -0.02
CDHR4-202ENST00000412678 RCAN3Q9UKA8 241 aa14.92□□□□□ -0.02
CDHR4-202ENST00000412678 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
CDHR4-202ENST00000412678 SPATA31E1Q6ZUB1 1445 aa14.91□□□□□ -0.02
CDHR4-202ENST00000412678 FGD1P98174 961 aa14.9□□□□□ -0.02
CDHR4-202ENST00000412678 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
CDHR4-202ENST00000412678 FBLN2P98095 1184 aa14.9□□□□□ -0.02
CDHR4-202ENST00000412678 ADAMTS12P58397 1594 aa14.89□□□□□ -0.03
CDHR4-202ENST00000412678 POLR1AO95602 1720 aaPredicted RBP14.88□□□□□ -0.03
CDHR4-202ENST00000412678 PLIN1O60240 522 aa14.88□□□□□ -0.03
CDHR4-202ENST00000412678 TPM2P07951 284 aa14.88□□□□□ -0.03
CDHR4-202ENST00000412678 KDM6BO15054 1643 aa14.88□□□□□ -0.03
CDHR4-202ENST00000412678 POGKQ9P215 609 aa14.87□□□□□ -0.03
CDHR4-202ENST00000412678 MYOM3Q5VTT5 1437 aa14.87□□□□□ -0.03
CDHR4-202ENST00000412678 A0A0U1RQG5 324 aaPredicted RBP14.87□□□□□ -0.03
CDHR4-202ENST00000412678 HECW1Q76N89 1606 aa14.87□□□□□ -0.03
CDHR4-202ENST00000412678 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
CDHR4-202ENST00000412678 PRDM4Q9UKN5 801 aa14.85□□□□□ -0.03
CDHR4-202ENST00000412678 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
CDHR4-202ENST00000412678 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
CDHR4-202ENST00000412678 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
CDHR4-202ENST00000412678 GOLGA6L3A6NEY3 463 aa14.82□□□□□ -0.04
CDHR4-202ENST00000412678 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
CDHR4-202ENST00000412678 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
CDHR4-202ENST00000412678 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDHR4-202ENST00000412678 FSD2A1L4K1 749 aa14.81□□□□□ -0.04
CDHR4-202ENST00000412678 PDE4CQ08493 712 aa14.81□□□□□ -0.04
CDHR4-202ENST00000412678 PDE3BQ13370 1112 aa14.81□□□□□ -0.04
CDHR4-202ENST00000412678 BCORL1Q5H9F3 1711 aa14.8□□□□□ -0.04
CDHR4-202ENST00000412678 TEX14Q8IWB6 1497 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms