RNA–Protein interactions for RNA: ENST00000398411.5

CST3-203, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST3, Length 3,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-203ENST00000398411 BRPF3Q9ULD4 1205 aa17.3■□□□□ 0.36
CST3-203ENST00000398411 PLIN1O60240 522 aa17.29■□□□□ 0.36
CST3-203ENST00000398411 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
CST3-203ENST00000398411 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
CST3-203ENST00000398411 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
CST3-203ENST00000398411 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
CST3-203ENST00000398411 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
CST3-203ENST00000398411 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.36
CST3-203ENST00000398411 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
CST3-203ENST00000398411 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
CST3-203ENST00000398411 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
CST3-203ENST00000398411 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
CST3-203ENST00000398411 WDR62O43379 1518 aa17.23■□□□□ 0.35
CST3-203ENST00000398411 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
CST3-203ENST00000398411 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
CST3-203ENST00000398411 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
CST3-203ENST00000398411 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
CST3-203ENST00000398411 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.35
CST3-203ENST00000398411 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.35
CST3-203ENST00000398411 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
CST3-203ENST00000398411 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
CST3-203ENST00000398411 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
CST3-203ENST00000398411 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
CST3-203ENST00000398411 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
CST3-203ENST00000398411 NAIPQ13075 1403 aa17.17■□□□□ 0.34
CST3-203ENST00000398411 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
CST3-203ENST00000398411 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
CST3-203ENST00000398411 CC2D1BQ5T0F9 858 aaKnown RBP17.15■□□□□ 0.34
CST3-203ENST00000398411 PDE4AP27815 886 aa17.15■□□□□ 0.34
CST3-203ENST00000398411 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
CST3-203ENST00000398411 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
CST3-203ENST00000398411 RGS3P49796 1198 aa17.13■□□□□ 0.33
CST3-203ENST00000398411 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
CST3-203ENST00000398411 FYCO1Q9BQS8 1478 aa17.13■□□□□ 0.33
CST3-203ENST00000398411 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
CST3-203ENST00000398411 HFM1A2PYH4 1435 aa17.1■□□□□ 0.33
CST3-203ENST00000398411 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
CST3-203ENST00000398411 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
CST3-203ENST00000398411 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
CST3-203ENST00000398411 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
CST3-203ENST00000398411 ST20-MTHFSA0A0A6YYL1 179 aa17.06■□□□□ 0.32
CST3-203ENST00000398411 PKD2Q13563 968 aa17.06■□□□□ 0.32
CST3-203ENST00000398411 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
CST3-203ENST00000398411 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
CST3-203ENST00000398411 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
CST3-203ENST00000398411 FBLN2P98095 1184 aa17.04■□□□□ 0.32
CST3-203ENST00000398411 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
CST3-203ENST00000398411 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
CST3-203ENST00000398411 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
CST3-203ENST00000398411 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
CST3-203ENST00000398411 USP47Q96K76 1375 aa17.02■□□□□ 0.31
CST3-203ENST00000398411 PTPN23Q9H3S7 1636 aa17.02■□□□□ 0.31
CST3-203ENST00000398411 CRBNQ96SW2 442 aa17.02■□□□□ 0.31
CST3-203ENST00000398411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.31
CST3-203ENST00000398411 IQGAP2Q13576 1575 aa17.01■□□□□ 0.31
CST3-203ENST00000398411 NFKBIBQ15653 356 aa16.99■□□□□ 0.31
CST3-203ENST00000398411 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
CST3-203ENST00000398411 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
CST3-203ENST00000398411 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
CST3-203ENST00000398411 LRRIQ1Q96JM4 1722 aa16.97■□□□□ 0.31
CST3-203ENST00000398411 BACH2Q9BYV9 841 aa16.97■□□□□ 0.31
CST3-203ENST00000398411 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
CST3-203ENST00000398411 GSE1Q14687 1217 aa16.97■□□□□ 0.31
CST3-203ENST00000398411 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
CST3-203ENST00000398411 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
CST3-203ENST00000398411 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
CST3-203ENST00000398411 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
CST3-203ENST00000398411 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
CST3-203ENST00000398411 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
CST3-203ENST00000398411 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
CST3-203ENST00000398411 SLKQ9H2G2 1235 aaPredicted RBP16.93■□□□□ 0.3
CST3-203ENST00000398411 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
CST3-203ENST00000398411 KDM6BO15054 1643 aa16.92■□□□□ 0.3
CST3-203ENST00000398411 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
CST3-203ENST00000398411 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
CST3-203ENST00000398411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
CST3-203ENST00000398411 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
CST3-203ENST00000398411 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
CST3-203ENST00000398411 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
CST3-203ENST00000398411 KIAA0586Q9BVV6 1533 aa16.88■□□□□ 0.29
CST3-203ENST00000398411 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
CST3-203ENST00000398411 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
CST3-203ENST00000398411 CDK13Q14004 1512 aaKnown RBP16.87■□□□□ 0.29
CST3-203ENST00000398411 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
CST3-203ENST00000398411 ANKRD30BQ9BXX2 1392 aa16.86■□□□□ 0.29
CST3-203ENST00000398411 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
CST3-203ENST00000398411 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
CST3-203ENST00000398411 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
CST3-203ENST00000398411 SUPT6HQ7KZ85 1726 aaKnown RBP16.85■□□□□ 0.29
CST3-203ENST00000398411 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
CST3-203ENST00000398411 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
CST3-203ENST00000398411 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
CST3-203ENST00000398411 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
CST3-203ENST00000398411 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
CST3-203ENST00000398411 NUP155O75694 1391 aa16.83■□□□□ 0.28
CST3-203ENST00000398411 ARHGEF11O15085 1522 aa16.82■□□□□ 0.28
CST3-203ENST00000398411 DDRGK1Q96HY6 314 aa16.82■□□□□ 0.28
CST3-203ENST00000398411 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
CST3-203ENST00000398411 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
CST3-203ENST00000398411 USP35Q9P2H5 1018 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms