RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 TMC1Q8TDI8 760 aa24.45■■□□□ 1.5
HERPUD2-202ENST00000396081 SUPT6HQ7KZ85 1726 aaKnown RBP24.44■■□□□ 1.5
HERPUD2-202ENST00000396081 IL27Q8NEV9 243 aa24.43■■□□□ 1.5
HERPUD2-202ENST00000396081 KDM6BO15054 1643 aa24.43■■□□□ 1.5
HERPUD2-202ENST00000396081 SALL2Q9Y467 1007 aaPredicted RBP24.43■■□□□ 1.5
HERPUD2-202ENST00000396081 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
HERPUD2-202ENST00000396081 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
HERPUD2-202ENST00000396081 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
HERPUD2-202ENST00000396081 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.5
HERPUD2-202ENST00000396081 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
HERPUD2-202ENST00000396081 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
HERPUD2-202ENST00000396081 NEFMP07197 916 aa24.38■■□□□ 1.49
HERPUD2-202ENST00000396081 RNF123Q5XPI4 1314 aa24.37■■□□□ 1.49
HERPUD2-202ENST00000396081 HECW1Q76N89 1606 aa24.37■■□□□ 1.49
HERPUD2-202ENST00000396081 ANKRD30BQ9BXX2 1392 aa24.36■■□□□ 1.49
HERPUD2-202ENST00000396081 UGGT2Q9NYU1 1516 aa24.36■■□□□ 1.49
HERPUD2-202ENST00000396081 EXOC6Q8TAG9 804 aa24.35■■□□□ 1.49
HERPUD2-202ENST00000396081 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
HERPUD2-202ENST00000396081 MAGI3Q5TCQ9 1506 aa24.33■■□□□ 1.49
HERPUD2-202ENST00000396081 PNISRQ8TF01 805 aaKnown RBP24.33■■□□□ 1.48
HERPUD2-202ENST00000396081 SPATA31E1Q6ZUB1 1445 aa24.33■■□□□ 1.48
HERPUD2-202ENST00000396081 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
HERPUD2-202ENST00000396081 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
HERPUD2-202ENST00000396081 DHX29Q7Z478 1369 aaKnown RBP24.32■■□□□ 1.48
HERPUD2-202ENST00000396081 CUL7Q14999 1698 aa24.31■■□□□ 1.48
HERPUD2-202ENST00000396081 CC2D2AQ9P2K1 1620 aa24.31■■□□□ 1.48
HERPUD2-202ENST00000396081 PDE4AP27815 886 aa24.29■■□□□ 1.48
HERPUD2-202ENST00000396081 USP47Q96K76 1375 aa24.28■■□□□ 1.48
HERPUD2-202ENST00000396081 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
HERPUD2-202ENST00000396081 GCC2Q8IWJ2 1684 aa24.28■■□□□ 1.48
HERPUD2-202ENST00000396081 TEX14Q8IWB6 1497 aa24.27■■□□□ 1.48
HERPUD2-202ENST00000396081 RRP1P56182 461 aaKnown RBP24.27■■□□□ 1.48
HERPUD2-202ENST00000396081 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
HERPUD2-202ENST00000396081 TCOF1Q13428 1488 aaKnown RBP24.26■■□□□ 1.47
HERPUD2-202ENST00000396081 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
HERPUD2-202ENST00000396081 RCAN3Q9UKA8 241 aa24.23■■□□□ 1.47
HERPUD2-202ENST00000396081 SAMD9Q5K651 1589 aa24.23■■□□□ 1.47
HERPUD2-202ENST00000396081 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.21■■□□□ 1.47
HERPUD2-202ENST00000396081 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
HERPUD2-202ENST00000396081 NESP48681 1621 aa24.19■■□□□ 1.46
HERPUD2-202ENST00000396081 CDK13Q14004 1512 aaKnown RBP24.19■■□□□ 1.46
HERPUD2-202ENST00000396081 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
HERPUD2-202ENST00000396081 SKAP1Q86WV1 359 aa24.19■■□□□ 1.46
HERPUD2-202ENST00000396081 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
HERPUD2-202ENST00000396081 BACH2Q9BYV9 841 aa24.18■■□□□ 1.46
HERPUD2-202ENST00000396081 CARD11Q9BXL7 1154 aa24.17■■□□□ 1.46
HERPUD2-202ENST00000396081 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
HERPUD2-202ENST00000396081 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
HERPUD2-202ENST00000396081 PPM1GO15355 546 aaPredicted RBP24.15■■□□□ 1.46
HERPUD2-202ENST00000396081 DAPK1P53355 1430 aa24.15■■□□□ 1.46
HERPUD2-202ENST00000396081 EPRSP07814 1512 aaKnown RBP24.15■■□□□ 1.46
HERPUD2-202ENST00000396081 PLIN1O60240 522 aa24.14■■□□□ 1.46
HERPUD2-202ENST00000396081 PKD2Q13563 968 aa24.14■■□□□ 1.46
HERPUD2-202ENST00000396081 USP35Q9P2H5 1018 aa24.14■■□□□ 1.45
HERPUD2-202ENST00000396081 ZNF777Q9ULD5 760 aaPredicted RBP24.14■■□□□ 1.45
HERPUD2-202ENST00000396081 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
HERPUD2-202ENST00000396081 ABCC5O15440 1437 aa24.11■■□□□ 1.45
HERPUD2-202ENST00000396081 KIF15Q9NS87 1388 aa24.11■■□□□ 1.45
HERPUD2-202ENST00000396081 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
HERPUD2-202ENST00000396081 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
HERPUD2-202ENST00000396081 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
HERPUD2-202ENST00000396081 BCORL1Q5H9F3 1711 aa24.09■■□□□ 1.45
HERPUD2-202ENST00000396081 SLC4A3P48751 1232 aa24.09■■□□□ 1.45
HERPUD2-202ENST00000396081 ROCK1Q13464 1354 aa24.08■■□□□ 1.45
HERPUD2-202ENST00000396081 MS4A1P11836 297 aa24.07■■□□□ 1.44
HERPUD2-202ENST00000396081 DAXXQ9UER7 740 aaPredicted RBP24.07■■□□□ 1.44
HERPUD2-202ENST00000396081 BRPF3Q9ULD4 1205 aa24.07■■□□□ 1.44
HERPUD2-202ENST00000396081 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
HERPUD2-202ENST00000396081 ROCK2O75116 1388 aaKnown RBP24.06■■□□□ 1.44
HERPUD2-202ENST00000396081 ARID4BQ4LE39 1312 aaPredicted RBP24.05■■□□□ 1.44
HERPUD2-202ENST00000396081 RALBP1Q15311 655 aa24.05■■□□□ 1.44
HERPUD2-202ENST00000396081 BRD4O60885 1362 aaPredicted RBP24.05■■□□□ 1.44
HERPUD2-202ENST00000396081 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
HERPUD2-202ENST00000396081 DDRGK1Q96HY6 314 aa24.02■■□□□ 1.44
HERPUD2-202ENST00000396081 CRBNQ96SW2 442 aa24.02■■□□□ 1.44
HERPUD2-202ENST00000396081 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
HERPUD2-202ENST00000396081 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
HERPUD2-202ENST00000396081 PZPP20742 1482 aa24■■□□□ 1.43
HERPUD2-202ENST00000396081 GSE1Q14687 1217 aa23.99■■□□□ 1.43
HERPUD2-202ENST00000396081 DCAF11Q8TEB1 546 aa23.99■■□□□ 1.43
HERPUD2-202ENST00000396081 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
HERPUD2-202ENST00000396081 WASHC2CQ9Y4E1 1318 aa23.98■■□□□ 1.43
HERPUD2-202ENST00000396081 NLRP13Q86W25 1043 aa23.98■■□□□ 1.43
HERPUD2-202ENST00000396081 NFKBIBQ15653 356 aa23.97■■□□□ 1.43
HERPUD2-202ENST00000396081 PDE3BQ13370 1112 aa23.97■■□□□ 1.43
HERPUD2-202ENST00000396081 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
HERPUD2-202ENST00000396081 CC2D1BQ5T0F9 858 aaKnown RBP23.95■■□□□ 1.43
HERPUD2-202ENST00000396081 EIF5BO60841 1220 aaKnown RBP23.95■■□□□ 1.42
HERPUD2-202ENST00000396081 MBD5Q9P267 1494 aa23.93■■□□□ 1.42
HERPUD2-202ENST00000396081 KTN1Q86UP2 1357 aaKnown RBP23.93■■□□□ 1.42
HERPUD2-202ENST00000396081 KDM5CP41229 1560 aa23.93■■□□□ 1.42
HERPUD2-202ENST00000396081 DNMT1P26358 1616 aaKnown RBP23.91■■□□□ 1.42
HERPUD2-202ENST00000396081 FRAT1Q92837 279 aaPredicted RBP23.91■■□□□ 1.42
HERPUD2-202ENST00000396081 NUP155O75694 1391 aa23.9■■□□□ 1.42
HERPUD2-202ENST00000396081 C20orf194Q5TEA3 1177 aa23.9■■□□□ 1.42
HERPUD2-202ENST00000396081 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
HERPUD2-202ENST00000396081 WDR62O43379 1518 aa23.88■■□□□ 1.41
HERPUD2-202ENST00000396081 KIF14Q15058 1648 aa23.87■■□□□ 1.41
HERPUD2-202ENST00000396081 IQGAP2Q13576 1575 aa23.86■■□□□ 1.41
HERPUD2-202ENST00000396081 RALGAPBQ86X10 1494 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms