RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SNAPC4Q5SXM2 1469 aa8.83□□□□□ -1
BDNF-203ENST00000395978 ZNF644Q9H582 1327 aaPredicted RBP8.82□□□□□ -1
BDNF-203ENST00000395978 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
BDNF-203ENST00000395978 RSPH4AQ5TD94 716 aa8.82□□□□□ -1
BDNF-203ENST00000395978 MAGI1Q96QZ7 1491 aaPredicted RBP8.82□□□□□ -1
BDNF-203ENST00000395978 WDR97A6NE52 1622 aa8.81□□□□□ -1
BDNF-203ENST00000395978 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
BDNF-203ENST00000395978 HFM1A2PYH4 1435 aa8.81□□□□□ -1
BDNF-203ENST00000395978 CCDC136Q96JN2 1154 aa8.8□□□□□ -1
BDNF-203ENST00000395978 PCF11O94913 1555 aaKnown RBP8.8□□□□□ -1
BDNF-203ENST00000395978 PTPRGP23470 1445 aa8.8□□□□□ -1
BDNF-203ENST00000395978 EIF4G3O43432 1585 aaKnown RBP8.79□□□□□ -1
BDNF-203ENST00000395978 SYNJ2O15056 1496 aa8.79□□□□□ -1
BDNF-203ENST00000395978 EFCAB2Q5VUJ9 269 aa8.79□□□□□ -1
BDNF-203ENST00000395978 MIA2Q96PC5 1412 aa8.79□□□□□ -1
BDNF-203ENST00000395978 EHBP1L1Q8N3D4 1523 aa8.79□□□□□ -1
BDNF-203ENST00000395978 CDCA8Q53HL2 280 aa8.78□□□□□ -1
BDNF-203ENST00000395978 WDR43Q15061 677 aaKnown RBP eCLIP8.78□□□□□ -1
BDNF-203ENST00000395978 NAIPQ13075 1403 aa8.76□□□□□ -1.01
BDNF-203ENST00000395978 PPP4R2Q9NY27 417 aa8.76□□□□□ -1.01
BDNF-203ENST00000395978 GRIN2AQ12879 1464 aa8.76□□□□□ -1.01
BDNF-203ENST00000395978 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
BDNF-203ENST00000395978 PBRM1Q86U86 1689 aa8.76□□□□□ -1.01
BDNF-203ENST00000395978 KIAA0586Q9BVV6 1533 aa8.76□□□□□ -1.01
BDNF-203ENST00000395978 OSCARQ8IYS5 282 aa8.75□□□□□ -1.01
BDNF-203ENST00000395978 KNSTRNQ9Y448 316 aa8.75□□□□□ -1.01
BDNF-203ENST00000395978 ANP32AP39687 249 aaKnown RBP8.75□□□□□ -1.01
BDNF-203ENST00000395978 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
BDNF-203ENST00000395978 EPRSP07814 1512 aaKnown RBP8.75□□□□□ -1.01
BDNF-203ENST00000395978 PRKRIP1Q9H875 184 aaPredicted RBP8.75□□□□□ -1.01
BDNF-203ENST00000395978 CANXP27824 592 aaKnown RBP8.74□□□□□ -1.01
BDNF-203ENST00000395978 TMF1P82094 1093 aa8.74□□□□□ -1.01
BDNF-203ENST00000395978 ADAMTS12P58397 1594 aa8.74□□□□□ -1.01
BDNF-203ENST00000395978 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
BDNF-203ENST00000395978 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
BDNF-203ENST00000395978 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
BDNF-203ENST00000395978 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
BDNF-203ENST00000395978 TROQ12816 1431 aaPredicted RBP8.73□□□□□ -1.01
BDNF-203ENST00000395978 HECW1Q76N89 1606 aa8.73□□□□□ -1.01
BDNF-203ENST00000395978 IQGAP2Q13576 1575 aa8.72□□□□□ -1.01
BDNF-203ENST00000395978 SUPT6HQ7KZ85 1726 aaKnown RBP8.72□□□□□ -1.01
BDNF-203ENST00000395978 ERICH6BQ5W0A0 696 aa8.72□□□□□ -1.01
BDNF-203ENST00000395978 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
BDNF-203ENST00000395978 ANKRD50Q9ULJ7 1429 aa8.72□□□□□ -1.01
BDNF-203ENST00000395978 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
BDNF-203ENST00000395978 CC2D1BQ5T0F9 858 aaKnown RBP8.71□□□□□ -1.01
BDNF-203ENST00000395978 KANK1Q14678 1352 aa8.71□□□□□ -1.01
BDNF-203ENST00000395978 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.01
BDNF-203ENST00000395978 RALBP1Q15311 655 aa8.71□□□□□ -1.01
BDNF-203ENST00000395978 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.71□□□□□ -1.01
BDNF-203ENST00000395978 CDK13Q14004 1512 aaKnown RBP8.71□□□□□ -1.02
BDNF-203ENST00000395978 CCDC7Q96M83 1385 aa8.71□□□□□ -1.02
BDNF-203ENST00000395978 USP47Q96K76 1375 aa8.71□□□□□ -1.02
BDNF-203ENST00000395978 SPAG9O60271 1321 aaKnown RBP8.7□□□□□ -1.02
BDNF-203ENST00000395978 KIF15Q9NS87 1388 aa8.7□□□□□ -1.02
BDNF-203ENST00000395978 NEFMP07197 916 aa8.7□□□□□ -1.02
BDNF-203ENST00000395978 ROCK1Q13464 1354 aa8.69□□□□□ -1.02
BDNF-203ENST00000395978 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
BDNF-203ENST00000395978 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
BDNF-203ENST00000395978 DAPK1P53355 1430 aa8.69□□□□□ -1.02
BDNF-203ENST00000395978 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
BDNF-203ENST00000395978 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
BDNF-203ENST00000395978 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
BDNF-203ENST00000395978 KTN1Q86UP2 1357 aaKnown RBP8.68□□□□□ -1.02
BDNF-203ENST00000395978 NBPF8Q3BBV2 869 aa8.68□□□□□ -1.02
BDNF-203ENST00000395978 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
BDNF-203ENST00000395978 KIF3BO15066 747 aa8.67□□□□□ -1.02
BDNF-203ENST00000395978 PTPRKQ15262 1439 aa8.67□□□□□ -1.02
BDNF-203ENST00000395978 MAPKBP1O60336 1514 aa8.67□□□□□ -1.02
BDNF-203ENST00000395978 CTTNBP2Q8WZ74 1663 aa8.67□□□□□ -1.02
BDNF-203ENST00000395978 NUP160Q12769 1436 aa8.67□□□□□ -1.02
BDNF-203ENST00000395978 PTPN23Q9H3S7 1636 aa8.66□□□□□ -1.02
BDNF-203ENST00000395978 CNTLNQ9NXG0 1405 aa8.66□□□□□ -1.02
BDNF-203ENST00000395978 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
BDNF-203ENST00000395978 ARID4BQ4LE39 1312 aaPredicted RBP8.66□□□□□ -1.02
BDNF-203ENST00000395978 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
BDNF-203ENST00000395978 ABCC5O15440 1437 aa8.66□□□□□ -1.02
BDNF-203ENST00000395978 KIAA1107Q9UPP5 1409 aa8.65□□□□□ -1.02
BDNF-203ENST00000395978 ZBED9Q6R2W3 1325 aa8.65□□□□□ -1.02
BDNF-203ENST00000395978 NUDCQ9Y266 331 aa8.65□□□□□ -1.03
BDNF-203ENST00000395978 GGT6Q6P531 493 aa8.64□□□□□ -1.03
BDNF-203ENST00000395978 ANKRD30BQ9BXX2 1392 aa8.64□□□□□ -1.03
BDNF-203ENST00000395978 PLB1Q6P1J6 1458 aa8.64□□□□□ -1.03
BDNF-203ENST00000395978 C9orf84Q5VXU9 1444 aa8.64□□□□□ -1.03
BDNF-203ENST00000395978 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
BDNF-203ENST00000395978 ZBTB47Q9UFB7 747 aaPredicted RBP8.63□□□□□ -1.03
BDNF-203ENST00000395978 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
BDNF-203ENST00000395978 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
BDNF-203ENST00000395978 UGGT2Q9NYU1 1516 aa8.63□□□□□ -1.03
BDNF-203ENST00000395978 CFAP53Q96M91 514 aa8.63□□□□□ -1.03
BDNF-203ENST00000395978 SENP3Q9H4L4 574 aaPredicted RBP8.63□□□□□ -1.03
BDNF-203ENST00000395978 CEP170Q5SW79 1584 aa8.62□□□□□ -1.03
BDNF-203ENST00000395978 NCOA1Q15788 1441 aa8.62□□□□□ -1.03
BDNF-203ENST00000395978 PANK3Q9H999 370 aa8.61□□□□□ -1.03
BDNF-203ENST00000395978 RCAN3Q9UKA8 241 aa8.61□□□□□ -1.03
BDNF-203ENST00000395978 CFAP43Q8NDM7 1665 aa8.61□□□□□ -1.03
BDNF-203ENST00000395978 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
BDNF-203ENST00000395978 CHD1O14646 1710 aa8.59□□□□□ -1.03
BDNF-203ENST00000395978 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
BDNF-203ENST00000395978 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms