RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.28
RNF38-206ENST00000377885 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
RNF38-206ENST00000377885 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
RNF38-206ENST00000377885 NCOA1Q15788 1441 aa13.26□□□□□ -0.29
RNF38-206ENST00000377885 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
RNF38-206ENST00000377885 ZNF777Q9ULD5 760 aaPredicted RBP13.25□□□□□ -0.29
RNF38-206ENST00000377885 USP35Q9P2H5 1018 aa13.25□□□□□ -0.29
RNF38-206ENST00000377885 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
RNF38-206ENST00000377885 CARD11Q9BXL7 1154 aa13.24□□□□□ -0.29
RNF38-206ENST00000377885 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
RNF38-206ENST00000377885 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
RNF38-206ENST00000377885 C11orf95C9JLR9 678 aaPredicted RBP13.22□□□□□ -0.29
RNF38-206ENST00000377885 RALBP1Q15311 655 aa13.22□□□□□ -0.29
RNF38-206ENST00000377885 CUL7Q14999 1698 aa13.22□□□□□ -0.29
RNF38-206ENST00000377885 ARID4BQ4LE39 1312 aaPredicted RBP13.21□□□□□ -0.29
RNF38-206ENST00000377885 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
RNF38-206ENST00000377885 TDRD9Q8NDG6 1382 aaKnown RBP13.21□□□□□ -0.29
RNF38-206ENST00000377885 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.3
RNF38-206ENST00000377885 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
RNF38-206ENST00000377885 NBPF8Q3BBV2 869 aa13.2□□□□□ -0.3
RNF38-206ENST00000377885 USP47Q96K76 1375 aa13.2□□□□□ -0.3
RNF38-206ENST00000377885 KIF15Q9NS87 1388 aa13.2□□□□□ -0.3
RNF38-206ENST00000377885 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
RNF38-206ENST00000377885 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
RNF38-206ENST00000377885 PDE4AP27815 886 aa13.19□□□□□ -0.3
RNF38-206ENST00000377885 MIA2Q96PC5 1412 aa13.19□□□□□ -0.3
RNF38-206ENST00000377885 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
RNF38-206ENST00000377885 MS4A1P11836 297 aa13.18□□□□□ -0.3
RNF38-206ENST00000377885 CFDP1Q9UEE9 299 aaPredicted RBP13.18□□□□□ -0.3
RNF38-206ENST00000377885 DNMBPQ6XZF7 1577 aa13.18□□□□□ -0.3
RNF38-206ENST00000377885 POLA1P09884 1462 aaPredicted RBP13.17□□□□□ -0.3
RNF38-206ENST00000377885 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
RNF38-206ENST00000377885 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
RNF38-206ENST00000377885 FBLN2P98095 1184 aa13.16□□□□□ -0.3
RNF38-206ENST00000377885 PKD2Q13563 968 aa13.16□□□□□ -0.3
RNF38-206ENST00000377885 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
RNF38-206ENST00000377885 THOC2Q8NI27 1593 aaKnown RBP13.16□□□□□ -0.3
RNF38-206ENST00000377885 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
RNF38-206ENST00000377885 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
RNF38-206ENST00000377885 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
RNF38-206ENST00000377885 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
RNF38-206ENST00000377885 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
RNF38-206ENST00000377885 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
RNF38-206ENST00000377885 KTN1Q86UP2 1357 aaKnown RBP13.14□□□□□ -0.31
RNF38-206ENST00000377885 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
RNF38-206ENST00000377885 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
RNF38-206ENST00000377885 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
RNF38-206ENST00000377885 PNISRQ8TF01 805 aaKnown RBP13.13□□□□□ -0.31
RNF38-206ENST00000377885 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
RNF38-206ENST00000377885 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
RNF38-206ENST00000377885 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
RNF38-206ENST00000377885 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
RNF38-206ENST00000377885 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
RNF38-206ENST00000377885 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
RNF38-206ENST00000377885 ROCK1Q13464 1354 aa13.12□□□□□ -0.31
RNF38-206ENST00000377885 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
RNF38-206ENST00000377885 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
RNF38-206ENST00000377885 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
RNF38-206ENST00000377885 DCAF11Q8TEB1 546 aa13.09□□□□□ -0.31
RNF38-206ENST00000377885 DAPK1P53355 1430 aa13.08□□□□□ -0.31
RNF38-206ENST00000377885 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
RNF38-206ENST00000377885 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
RNF38-206ENST00000377885 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.32
RNF38-206ENST00000377885 ST20-MTHFSA0A0A6YYL1 179 aa13.07□□□□□ -0.32
RNF38-206ENST00000377885 GSE1Q14687 1217 aa13.07□□□□□ -0.32
RNF38-206ENST00000377885 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
RNF38-206ENST00000377885 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
RNF38-206ENST00000377885 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
RNF38-206ENST00000377885 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
RNF38-206ENST00000377885 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
RNF38-206ENST00000377885 NUP155O75694 1391 aa13.06□□□□□ -0.32
RNF38-206ENST00000377885 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
RNF38-206ENST00000377885 ANO8Q9HCE9 1232 aaPredicted RBP13.06□□□□□ -0.32
RNF38-206ENST00000377885 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
RNF38-206ENST00000377885 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
RNF38-206ENST00000377885 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
RNF38-206ENST00000377885 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
RNF38-206ENST00000377885 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
RNF38-206ENST00000377885 BECN1Q14457 450 aa13.03□□□□□ -0.32
RNF38-206ENST00000377885 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
RNF38-206ENST00000377885 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
RNF38-206ENST00000377885 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.32
RNF38-206ENST00000377885 PLEKHD1A6NEE1 506 aa13.02□□□□□ -0.33
RNF38-206ENST00000377885 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
RNF38-206ENST00000377885 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.33
RNF38-206ENST00000377885 PLIN1O60240 522 aa13.01□□□□□ -0.33
RNF38-206ENST00000377885 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
RNF38-206ENST00000377885 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
RNF38-206ENST00000377885 RGS3P49796 1198 aa13.01□□□□□ -0.33
RNF38-206ENST00000377885 ABCC5O15440 1437 aa13.01□□□□□ -0.33
RNF38-206ENST00000377885 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
RNF38-206ENST00000377885 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
RNF38-206ENST00000377885 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
RNF38-206ENST00000377885 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
RNF38-206ENST00000377885 TMF1P82094 1093 aa13□□□□□ -0.33
RNF38-206ENST00000377885 KNSTRNQ9Y448 316 aa13□□□□□ -0.33
RNF38-206ENST00000377885 FAM161AQ3B820 660 aa13□□□□□ -0.33
RNF38-206ENST00000377885 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
RNF38-206ENST00000377885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
RNF38-206ENST00000377885 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms