RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 FGD5Q6ZNL6 1462 aa9.52□□□□□ -0.89
SSX1-201ENST00000376919 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
SSX1-201ENST00000376919 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
SSX1-201ENST00000376919 POLA1P09884 1462 aaPredicted RBP9.51□□□□□ -0.89
SSX1-201ENST00000376919 SYNJ1O43426 1573 aa9.5□□□□□ -0.89
SSX1-201ENST00000376919 TOP2BQ02880 1626 aa9.5□□□□□ -0.89
SSX1-201ENST00000376919 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
SSX1-201ENST00000376919 TARBP1Q13395 1621 aaKnown RBP9.47□□□□□ -0.89
SSX1-201ENST00000376919 PSEN1P49768 467 aa9.47□□□□□ -0.89
SSX1-201ENST00000376919 SOGA1O94964 1423 aa9.47□□□□□ -0.89
SSX1-201ENST00000376919 WDR97A6NE52 1622 aa9.46□□□□□ -0.89
SSX1-201ENST00000376919 P3H3Q8IVL6 736 aa9.46□□□□□ -0.9
SSX1-201ENST00000376919 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
SSX1-201ENST00000376919 RAD54L2Q9Y4B4 1467 aa9.46□□□□□ -0.9
SSX1-201ENST00000376919 MAP3K13O43283 966 aa9.45□□□□□ -0.9
SSX1-201ENST00000376919 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
SSX1-201ENST00000376919 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
SSX1-201ENST00000376919 PBRM1Q86U86 1689 aa9.44□□□□□ -0.9
SSX1-201ENST00000376919 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
SSX1-201ENST00000376919 ZRANB1Q9UGI0 708 aa9.43□□□□□ -0.9
SSX1-201ENST00000376919 ABCA10Q8WWZ4 1543 aa9.4□□□□□ -0.91
SSX1-201ENST00000376919 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.912e-7■■■■□ 22.1
SSX1-201ENST00000376919 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
SSX1-201ENST00000376919 ABCA5Q8WWZ7 1642 aa9.39□□□□□ -0.91
SSX1-201ENST00000376919 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
SSX1-201ENST00000376919 CHD1O14646 1710 aa9.38□□□□□ -0.91
SSX1-201ENST00000376919 GAPVD1Q14C86 1478 aa9.38□□□□□ -0.91
SSX1-201ENST00000376919 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
SSX1-201ENST00000376919 GRIN2BQ13224 1484 aa9.36□□□□□ -0.91
SSX1-201ENST00000376919 SNAPC4Q5SXM2 1469 aa9.36□□□□□ -0.91
SSX1-201ENST00000376919 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
SSX1-201ENST00000376919 CABP2Q9NPB3 220 aa9.35□□□□□ -0.91
SSX1-201ENST00000376919 EFCAB3Q8N7B9 438 aa9.34□□□□□ -0.91
SSX1-201ENST00000376919 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
SSX1-201ENST00000376919 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
SSX1-201ENST00000376919 SOX12O15370 315 aa9.33□□□□□ -0.92
SSX1-201ENST00000376919 KIF27Q86VH2 1401 aa9.32□□□□□ -0.92
SSX1-201ENST00000376919 NLRP6P59044 892 aa9.32□□□□□ -0.92
SSX1-201ENST00000376919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSX1-201ENST00000376919 FBXO22Q8NEZ5 403 aa9.32□□□□□ -0.92
SSX1-201ENST00000376919 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
SSX1-201ENST00000376919 ERICH3Q5RHP9 1530 aa9.31□□□□□ -0.92
SSX1-201ENST00000376919 CUL7Q14999 1698 aa9.31□□□□□ -0.92
SSX1-201ENST00000376919 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
SSX1-201ENST00000376919 SYNJ2O15056 1496 aa9.29□□□□□ -0.92
SSX1-201ENST00000376919 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
SSX1-201ENST00000376919 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
SSX1-201ENST00000376919 PHF8Q9UPP1 1060 aa9.29□□□□□ -0.92
SSX1-201ENST00000376919 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
SSX1-201ENST00000376919 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
SSX1-201ENST00000376919 WDR70Q9NW82 654 aa9.28□□□□□ -0.92
SSX1-201ENST00000376919 PPP1R37O75864 691 aa9.27□□□□□ -0.93
SSX1-201ENST00000376919 FHAD1B1AJZ9 1412 aa9.26□□□□□ -0.93
SSX1-201ENST00000376919 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
SSX1-201ENST00000376919 TRPC6Q9Y210 931 aa9.25□□□□□ -0.93
SSX1-201ENST00000376919 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
SSX1-201ENST00000376919 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
SSX1-201ENST00000376919 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.93
SSX1-201ENST00000376919 TIE1P35590 1138 aa9.21□□□□□ -0.94
SSX1-201ENST00000376919 MS4A4AQ96JQ5 239 aa9.21□□□□□ -0.94
SSX1-201ENST00000376919 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
SSX1-201ENST00000376919 NEUROD2Q15784 382 aa9.2□□□□□ -0.94
SSX1-201ENST00000376919 FAM9AQ8IZU1 332 aaPredicted RBP9.2□□□□□ -0.94
SSX1-201ENST00000376919 EEA1Q15075 1411 aa9.2□□□□□ -0.94
SSX1-201ENST00000376919 MKRN3Q13064 507 aaKnown RBP9.19□□□□□ -0.94
SSX1-201ENST00000376919 CARMIL1Q5VZK9 1371 aa9.19□□□□□ -0.94
SSX1-201ENST00000376919 CLASP1Q7Z460 1538 aa9.19□□□□□ -0.94
SSX1-201ENST00000376919 CTTNBP2Q8WZ74 1663 aa9.19□□□□□ -0.94
SSX1-201ENST00000376919 IGF1RP08069 1367 aa9.18□□□□□ -0.94
SSX1-201ENST00000376919 RAPGEF2Q9Y4G8 1499 aa9.17□□□□□ -0.94
SSX1-201ENST00000376919 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
SSX1-201ENST00000376919 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
SSX1-201ENST00000376919 RIMBP3CA6NJZ7 1639 aa9.16□□□□□ -0.94
SSX1-201ENST00000376919 RIMBP3BA6NNM3 1639 aa9.16□□□□□ -0.94
SSX1-201ENST00000376919 RIMBP3Q9UFD9 1639 aa9.16□□□□□ -0.94
SSX1-201ENST00000376919 HAX1O00165 279 aa9.16□□□□□ -0.94
SSX1-201ENST00000376919 CLCN6P51797 869 aa9.16□□□□□ -0.94
SSX1-201ENST00000376919 BMP2KQ9NSY1 1161 aaPredicted RBP9.16□□□□□ -0.94
SSX1-201ENST00000376919 NUP160Q12769 1436 aa9.15□□□□□ -0.94
SSX1-201ENST00000376919 GALR2O43603 387 aaPredicted RBP9.15□□□□□ -0.94
SSX1-201ENST00000376919 ARHGEF11O15085 1522 aa9.15□□□□□ -0.95
SSX1-201ENST00000376919 ARHGEF1Q92888 912 aaKnown RBP9.14□□□□□ -0.95
SSX1-201ENST00000376919 IQGAP2Q13576 1575 aa9.14□□□□□ -0.95
SSX1-201ENST00000376919 ILDR1Q86SU0 546 aaPredicted RBP9.13□□□□□ -0.95
SSX1-201ENST00000376919 SLC24A3Q9HC58 644 aa9.13□□□□□ -0.95
SSX1-201ENST00000376919 KIF21BO75037 1637 aa9.13□□□□□ -0.95
SSX1-201ENST00000376919 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
SSX1-201ENST00000376919 EVX2Q03828 476 aa9.12□□□□□ -0.95
SSX1-201ENST00000376919 PDE4AP27815 886 aa9.11□□□□□ -0.95
SSX1-201ENST00000376919 E2F4Q16254 413 aa9.11□□□□□ -0.95
SSX1-201ENST00000376919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.95
SSX1-201ENST00000376919 TRIM35Q9UPQ4 493 aa9.11□□□□□ -0.95
SSX1-201ENST00000376919 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
SSX1-201ENST00000376919 KIAA0586Q9BVV6 1533 aa9.1□□□□□ -0.95
SSX1-201ENST00000376919 PRXQ9BXM0 1461 aa9.1□□□□□ -0.95
SSX1-201ENST00000376919 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
SSX1-201ENST00000376919 MFSD10Q14728 455 aa9.09□□□□□ -0.95
SSX1-201ENST00000376919 LARP6Q9BRS8 491 aaKnown RBP9.09□□□□□ -0.95
SSX1-201ENST00000376919 GOLGA3Q08378 1498 aa9.08□□□□□ -0.96
SSX1-201ENST00000376919 PODXL2Q9NZ53 605 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms