RNA–Protein interactions for RNA: ENST00000372271.3

FAM78A-203, Transcript of family with sequence similarity 78 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78A, Length 3,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-203ENST00000372271 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
FAM78A-203ENST00000372271 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
FAM78A-203ENST00000372271 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
FAM78A-203ENST00000372271 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■□ 24.1
FAM78A-203ENST00000372271 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.46
FAM78A-203ENST00000372271 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
FAM78A-203ENST00000372271 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
FAM78A-203ENST00000372271 NUP155O75694 1391 aa17.92■□□□□ 0.46
FAM78A-203ENST00000372271 PTPN23Q9H3S7 1636 aa17.89■□□□□ 0.46
FAM78A-203ENST00000372271 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.45
FAM78A-203ENST00000372271 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
FAM78A-203ENST00000372271 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
FAM78A-203ENST00000372271 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
FAM78A-203ENST00000372271 USP47Q96K76 1375 aa17.87■□□□□ 0.45
FAM78A-203ENST00000372271 SUPT6HQ7KZ85 1726 aaKnown RBP17.87■□□□□ 0.45
FAM78A-203ENST00000372271 ST20-MTHFSA0A0A6YYL1 179 aa17.87■□□□□ 0.45
FAM78A-203ENST00000372271 CDK13Q14004 1512 aaKnown RBP17.87■□□□□ 0.45
FAM78A-203ENST00000372271 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
FAM78A-203ENST00000372271 ANKRD30AQ9BXX3 1397 aa17.85■□□□□ 0.45
FAM78A-203ENST00000372271 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■■□□□ 13
FAM78A-203ENST00000372271 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
FAM78A-203ENST00000372271 CUL7Q14999 1698 aa17.84■□□□□ 0.45
FAM78A-203ENST00000372271 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
FAM78A-203ENST00000372271 MSH5O43196 834 aa17.84■□□□□ 0.45
FAM78A-203ENST00000372271 EPRSP07814 1512 aaKnown RBP17.81■□□□□ 0.44
FAM78A-203ENST00000372271 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
FAM78A-203ENST00000372271 JPH4Q96JJ6 628 aa17.8■□□□□ 0.44
FAM78A-203ENST00000372271 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
FAM78A-203ENST00000372271 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
FAM78A-203ENST00000372271 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
FAM78A-203ENST00000372271 MIA2Q96PC5 1412 aa17.78■□□□□ 0.44
FAM78A-203ENST00000372271 DEKP35659 375 aaKnown RBP17.78■□□□□ 0.44
FAM78A-203ENST00000372271 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
FAM78A-203ENST00000372271 ERCC6Q03468 1493 aa17.77■□□□□ 0.44
FAM78A-203ENST00000372271 RCAN3Q9UKA8 241 aa17.77■□□□□ 0.43
FAM78A-203ENST00000372271 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
FAM78A-203ENST00000372271 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
FAM78A-203ENST00000372271 DAPK1P53355 1430 aa17.76■□□□□ 0.43
FAM78A-203ENST00000372271 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
FAM78A-203ENST00000372271 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
FAM78A-203ENST00000372271 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
FAM78A-203ENST00000372271 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
FAM78A-203ENST00000372271 RALBP1Q15311 655 aa17.73■□□□□ 0.43
FAM78A-203ENST00000372271 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
FAM78A-203ENST00000372271 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
FAM78A-203ENST00000372271 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.43
FAM78A-203ENST00000372271 NCOA1Q15788 1441 aa17.71■□□□□ 0.43
FAM78A-203ENST00000372271 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
FAM78A-203ENST00000372271 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
FAM78A-203ENST00000372271 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
FAM78A-203ENST00000372271 KIF15Q9NS87 1388 aa17.71■□□□□ 0.42
FAM78A-203ENST00000372271 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
FAM78A-203ENST00000372271 ABCC5O15440 1437 aa17.7■□□□□ 0.42
FAM78A-203ENST00000372271 MYBBP1AQ9BQG0 1328 aaKnown RBP17.7■□□□□ 0.42
FAM78A-203ENST00000372271 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
FAM78A-203ENST00000372271 ANKRD50Q9ULJ7 1429 aa17.69■□□□□ 0.42
FAM78A-203ENST00000372271 PLIN1O60240 522 aa17.68■□□□□ 0.42
FAM78A-203ENST00000372271 IQGAP2Q13576 1575 aa17.68■□□□□ 0.42
FAM78A-203ENST00000372271 TMF1P82094 1093 aa17.68■□□□□ 0.42
FAM78A-203ENST00000372271 IPO9Q96P70 1041 aaKnown RBP17.68■□□□□ 0.42
FAM78A-203ENST00000372271 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
FAM78A-203ENST00000372271 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
FAM78A-203ENST00000372271 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
FAM78A-203ENST00000372271 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
FAM78A-203ENST00000372271 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
FAM78A-203ENST00000372271 ROCK1Q13464 1354 aa17.65■□□□□ 0.42
FAM78A-203ENST00000372271 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.42
FAM78A-203ENST00000372271 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.64■□□□□ 0.41
FAM78A-203ENST00000372271 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
FAM78A-203ENST00000372271 NEFMP07197 916 aa17.64■□□□□ 0.41
FAM78A-203ENST00000372271 PANK3Q9H999 370 aa17.63■□□□□ 0.41
FAM78A-203ENST00000372271 RGS3P49796 1198 aa17.62■□□□□ 0.41
FAM78A-203ENST00000372271 MAGI3Q5TCQ9 1506 aa17.61■□□□□ 0.41
FAM78A-203ENST00000372271 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
FAM78A-203ENST00000372271 CDCA7LQ96GN5 454 aa17.61■□□□□ 0.41
FAM78A-203ENST00000372271 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
FAM78A-203ENST00000372271 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
FAM78A-203ENST00000372271 CCDC144AA2RUR9 1427 aa17.6■□□□□ 0.41
FAM78A-203ENST00000372271 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
FAM78A-203ENST00000372271 NEUROD2Q15784 382 aa17.58■□□□□ 0.41
FAM78A-203ENST00000372271 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.4
FAM78A-203ENST00000372271 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
FAM78A-203ENST00000372271 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
FAM78A-203ENST00000372271 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
FAM78A-203ENST00000372271 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
FAM78A-203ENST00000372271 PDE4AP27815 886 aa17.56■□□□□ 0.4
FAM78A-203ENST00000372271 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
FAM78A-203ENST00000372271 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
FAM78A-203ENST00000372271 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
FAM78A-203ENST00000372271 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
FAM78A-203ENST00000372271 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
FAM78A-203ENST00000372271 SAMD9Q5K651 1589 aa17.54■□□□□ 0.4
FAM78A-203ENST00000372271 CAMSAP2Q08AD1 1489 aa17.54■□□□□ 0.4
FAM78A-203ENST00000372271 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
FAM78A-203ENST00000372271 KDM6BO15054 1643 aa17.54■□□□□ 0.4
FAM78A-203ENST00000372271 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
FAM78A-203ENST00000372271 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
FAM78A-203ENST00000372271 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
FAM78A-203ENST00000372271 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
FAM78A-203ENST00000372271 CCDC146Q8IYE0 955 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms