RNA–Protein interactions for RNA: ENST00000369702.4

DDX20-201, Transcript of DEAD-box helicase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX20, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20-201ENST00000369702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX20-201ENST00000369702 DCAF11Q8TEB1 546 aa19.2■□□□□ 0.66
DDX20-201ENST00000369702 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
DDX20-201ENST00000369702 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
DDX20-201ENST00000369702 AKNAQ7Z591 1439 aa19.19■□□□□ 0.66
DDX20-201ENST00000369702 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
DDX20-201ENST00000369702 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
DDX20-201ENST00000369702 PPM1GO15355 546 aaPredicted RBP19.16■□□□□ 0.66
DDX20-201ENST00000369702 PTPRKQ15262 1439 aa19.15■□□□□ 0.66
DDX20-201ENST00000369702 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
DDX20-201ENST00000369702 ZNF644Q9H582 1327 aaPredicted RBP19.14■□□□□ 0.65
DDX20-201ENST00000369702 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
DDX20-201ENST00000369702 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
DDX20-201ENST00000369702 USP47Q96K76 1375 aa19.13■□□□□ 0.65
DDX20-201ENST00000369702 TCERG1O14776 1098 aaKnown RBP19.13■□□□□ 0.65
DDX20-201ENST00000369702 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
DDX20-201ENST00000369702 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
DDX20-201ENST00000369702 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.653e-6■■■■□ 22.4
DDX20-201ENST00000369702 RGS3P49796 1198 aa19.08■□□□□ 0.65
DDX20-201ENST00000369702 PDE4AP27815 886 aa19.08■□□□□ 0.64
DDX20-201ENST00000369702 RRP1P56182 461 aaKnown RBP19.08■□□□□ 0.64
DDX20-201ENST00000369702 PLEKHD1A6NEE1 506 aa19.07■□□□□ 0.64
DDX20-201ENST00000369702 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.07■□□□□ 0.64
DDX20-201ENST00000369702 PLIN1O60240 522 aa19.07■□□□□ 0.64
DDX20-201ENST00000369702 RALBP1Q15311 655 aa19.06■□□□□ 0.64
DDX20-201ENST00000369702 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
DDX20-201ENST00000369702 PTPN23Q9H3S7 1636 aa19.06■□□□□ 0.64
DDX20-201ENST00000369702 NUP155O75694 1391 aa19.05■□□□□ 0.64
DDX20-201ENST00000369702 ARXQ96QS3 562 aa19.04■□□□□ 0.64
DDX20-201ENST00000369702 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
DDX20-201ENST00000369702 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
DDX20-201ENST00000369702 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
DDX20-201ENST00000369702 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
DDX20-201ENST00000369702 KIF15Q9NS87 1388 aa19.02■□□□□ 0.64
DDX20-201ENST00000369702 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
DDX20-201ENST00000369702 ROCK2O75116 1388 aaKnown RBP19.01■□□□□ 0.63
DDX20-201ENST00000369702 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
DDX20-201ENST00000369702 NCOA1Q15788 1441 aa19■□□□□ 0.63
DDX20-201ENST00000369702 SLC4A3P48751 1232 aa18.99■□□□□ 0.63
DDX20-201ENST00000369702 PNISRQ8TF01 805 aaKnown RBP18.99■□□□□ 0.63
DDX20-201ENST00000369702 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
DDX20-201ENST00000369702 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.98■□□□□ 0.63
DDX20-201ENST00000369702 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
DDX20-201ENST00000369702 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
DDX20-201ENST00000369702 NESP48681 1621 aa18.97■□□□□ 0.63
DDX20-201ENST00000369702 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
DDX20-201ENST00000369702 SUPT6HQ7KZ85 1726 aaKnown RBP18.97■□□□□ 0.63
DDX20-201ENST00000369702 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
DDX20-201ENST00000369702 PDE3BQ13370 1112 aa18.94■□□□□ 0.62
DDX20-201ENST00000369702 CRBNQ96SW2 442 aa18.94■□□□□ 0.62
DDX20-201ENST00000369702 CDCA7LQ96GN5 454 aa18.93■□□□□ 0.62
DDX20-201ENST00000369702 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
DDX20-201ENST00000369702 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
DDX20-201ENST00000369702 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
DDX20-201ENST00000369702 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
DDX20-201ENST00000369702 UPF2Q9HAU5 1272 aaKnown RBP18.92■□□□□ 0.62
DDX20-201ENST00000369702 TMF1P82094 1093 aa18.91■□□□□ 0.62
DDX20-201ENST00000369702 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
DDX20-201ENST00000369702 CDK13Q14004 1512 aaKnown RBP18.88■□□□□ 0.61
DDX20-201ENST00000369702 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDX20-201ENST00000369702 MIA2Q96PC5 1412 aa18.88■□□□□ 0.61
DDX20-201ENST00000369702 MS4A1P11836 297 aa18.87■□□□□ 0.61
DDX20-201ENST00000369702 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
DDX20-201ENST00000369702 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
DDX20-201ENST00000369702 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
DDX20-201ENST00000369702 PANK3Q9H999 370 aa18.86■□□□□ 0.61
DDX20-201ENST00000369702 ARID4BQ4LE39 1312 aaPredicted RBP18.86■□□□□ 0.61
DDX20-201ENST00000369702 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
DDX20-201ENST00000369702 DAPK1P53355 1430 aa18.85■□□□□ 0.61
DDX20-201ENST00000369702 BRD4O60885 1362 aaPredicted RBP18.85■□□□□ 0.61
DDX20-201ENST00000369702 BACH2Q9BYV9 841 aa18.84■□□□□ 0.61
DDX20-201ENST00000369702 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
DDX20-201ENST00000369702 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.61
DDX20-201ENST00000369702 BECN1Q14457 450 aa18.83■□□□□ 0.61
DDX20-201ENST00000369702 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.61
DDX20-201ENST00000369702 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
DDX20-201ENST00000369702 GSE1Q14687 1217 aa18.81■□□□□ 0.6
DDX20-201ENST00000369702 CHGAP10645 457 aaKnown RBP18.8■□□□□ 0.6
DDX20-201ENST00000369702 CUL7Q14999 1698 aa18.8■□□□□ 0.6
DDX20-201ENST00000369702 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
DDX20-201ENST00000369702 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
DDX20-201ENST00000369702 ANKRD50Q9ULJ7 1429 aa18.79■□□□□ 0.6
DDX20-201ENST00000369702 KIAA1107Q9UPP5 1409 aa18.79■□□□□ 0.6
DDX20-201ENST00000369702 GOLGA2Q08379 1002 aa18.79■□□□□ 0.6
DDX20-201ENST00000369702 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
DDX20-201ENST00000369702 CDCA8Q53HL2 280 aa18.77■□□□□ 0.6
DDX20-201ENST00000369702 SLKQ9H2G2 1235 aaPredicted RBP18.77■□□□□ 0.6
DDX20-201ENST00000369702 ABCC5O15440 1437 aa18.77■□□□□ 0.6
DDX20-201ENST00000369702 NFKBIBQ15653 356 aa18.77■□□□□ 0.59
DDX20-201ENST00000369702 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.59
DDX20-201ENST00000369702 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
DDX20-201ENST00000369702 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
DDX20-201ENST00000369702 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
DDX20-201ENST00000369702 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
DDX20-201ENST00000369702 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
DDX20-201ENST00000369702 ROCK1Q13464 1354 aa18.75■□□□□ 0.59
DDX20-201ENST00000369702 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
DDX20-201ENST00000369702 BRPF3Q9ULD4 1205 aa18.75■□□□□ 0.59
DDX20-201ENST00000369702 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
DDX20-201ENST00000369702 PRG4Q92954 1404 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms