RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
PHTF1-204ENST00000369604 RNF123Q5XPI4 1314 aa19.21■□□□□ 0.67
PHTF1-204ENST00000369604 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
PHTF1-204ENST00000369604 TCERG1O14776 1098 aaKnown RBP19.21■□□□□ 0.67
PHTF1-204ENST00000369604 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
PHTF1-204ENST00000369604 EIF5BO60841 1220 aaKnown RBP19.19■□□□□ 0.66
PHTF1-204ENST00000369604 BRPF3Q9ULD4 1205 aa19.15■□□□□ 0.66
PHTF1-204ENST00000369604 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
PHTF1-204ENST00000369604 RRP1P56182 461 aaKnown RBP19.14■□□□□ 0.65
PHTF1-204ENST00000369604 DAXXQ9UER7 740 aaPredicted RBP19.14■□□□□ 0.65
PHTF1-204ENST00000369604 NESP48681 1621 aa19.13■□□□□ 0.65
PHTF1-204ENST00000369604 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
PHTF1-204ENST00000369604 BACH2Q9BYV9 841 aa19.13■□□□□ 0.65
PHTF1-204ENST00000369604 PNISRQ8TF01 805 aaKnown RBP19.12■□□□□ 0.65
PHTF1-204ENST00000369604 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
PHTF1-204ENST00000369604 DENND4BO75064 1496 aaPredicted RBP19.1■□□□□ 0.65
PHTF1-204ENST00000369604 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
PHTF1-204ENST00000369604 GSE1Q14687 1217 aa19.09■□□□□ 0.65
PHTF1-204ENST00000369604 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.65
PHTF1-204ENST00000369604 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.64
PHTF1-204ENST00000369604 DDRGK1Q96HY6 314 aa19.08■□□□□ 0.64
PHTF1-204ENST00000369604 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
PHTF1-204ENST00000369604 SNAPC4Q5SXM2 1469 aa19.07■□□□□ 0.64
PHTF1-204ENST00000369604 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
PHTF1-204ENST00000369604 MS4A1P11836 297 aa19.06■□□□□ 0.64
PHTF1-204ENST00000369604 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
PHTF1-204ENST00000369604 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
PHTF1-204ENST00000369604 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
PHTF1-204ENST00000369604 ANKRD30BQ9BXX2 1392 aa19.04■□□□□ 0.64
PHTF1-204ENST00000369604 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
PHTF1-204ENST00000369604 NFKBIBQ15653 356 aa19.03■□□□□ 0.64
PHTF1-204ENST00000369604 KDM6BO15054 1643 aa19.02■□□□□ 0.64
PHTF1-204ENST00000369604 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
PHTF1-204ENST00000369604 USP47Q96K76 1375 aa19.02■□□□□ 0.64
PHTF1-204ENST00000369604 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
PHTF1-204ENST00000369604 PLIN1O60240 522 aa19.01■□□□□ 0.63
PHTF1-204ENST00000369604 FRAT1Q92837 279 aaPredicted RBP19■□□□□ 0.63
PHTF1-204ENST00000369604 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
PHTF1-204ENST00000369604 UBE2Q2Q8WVN8 375 aa18.98■□□□□ 0.63
PHTF1-204ENST00000369604 TEX14Q8IWB6 1497 aa18.96■□□□□ 0.63
PHTF1-204ENST00000369604 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
PHTF1-204ENST00000369604 MIA2Q96PC5 1412 aa18.95■□□□□ 0.62
PHTF1-204ENST00000369604 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
PHTF1-204ENST00000369604 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
PHTF1-204ENST00000369604 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
PHTF1-204ENST00000369604 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
PHTF1-204ENST00000369604 MYBBP1AQ9BQG0 1328 aaKnown RBP18.94■□□□□ 0.62
PHTF1-204ENST00000369604 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
PHTF1-204ENST00000369604 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
PHTF1-204ENST00000369604 KIF15Q9NS87 1388 aa18.93■□□□□ 0.62
PHTF1-204ENST00000369604 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
PHTF1-204ENST00000369604 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
PHTF1-204ENST00000369604 RALBP1Q15311 655 aa18.91■□□□□ 0.62
PHTF1-204ENST00000369604 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
PHTF1-204ENST00000369604 CTTNBP2Q8WZ74 1663 aa18.9■□□□□ 0.62
PHTF1-204ENST00000369604 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
PHTF1-204ENST00000369604 BRD4O60885 1362 aaPredicted RBP18.9■□□□□ 0.62
PHTF1-204ENST00000369604 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
PHTF1-204ENST00000369604 PDE3BQ13370 1112 aa18.89■□□□□ 0.62
PHTF1-204ENST00000369604 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-204ENST00000369604 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
PHTF1-204ENST00000369604 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
PHTF1-204ENST00000369604 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-204ENST00000369604 LRPPRCP42704 1394 aaKnown RBP18.88■□□□□ 0.61
PHTF1-204ENST00000369604 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
PHTF1-204ENST00000369604 FBLN2P98095 1184 aa18.87■□□□□ 0.61
PHTF1-204ENST00000369604 LRRIQ1Q96JM4 1722 aa18.87■□□□□ 0.61
PHTF1-204ENST00000369604 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-204ENST00000369604 FRAT2O75474 233 aaPredicted RBP18.86■□□□□ 0.61
PHTF1-204ENST00000369604 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
PHTF1-204ENST00000369604 PKD2Q13563 968 aa18.85■□□□□ 0.61
PHTF1-204ENST00000369604 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
PHTF1-204ENST00000369604 CUL7Q14999 1698 aa18.84■□□□□ 0.61
PHTF1-204ENST00000369604 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.61
PHTF1-204ENST00000369604 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
PHTF1-204ENST00000369604 RGS3P49796 1198 aa18.82■□□□□ 0.6
PHTF1-204ENST00000369604 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
PHTF1-204ENST00000369604 ARHGEF11O15085 1522 aa18.82■□□□□ 0.6
PHTF1-204ENST00000369604 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
PHTF1-204ENST00000369604 DAPK1P53355 1430 aa18.81■□□□□ 0.6
PHTF1-204ENST00000369604 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
PHTF1-204ENST00000369604 RSPH6AQ9H0K4 717 aa18.8■□□□□ 0.6
PHTF1-204ENST00000369604 C20orf194Q5TEA3 1177 aa18.8■□□□□ 0.6
PHTF1-204ENST00000369604 ZNF777Q9ULD5 760 aaPredicted RBP18.8■□□□□ 0.6
PHTF1-204ENST00000369604 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
PHTF1-204ENST00000369604 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
PHTF1-204ENST00000369604 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
PHTF1-204ENST00000369604 SAMD9Q5K651 1589 aa18.79■□□□□ 0.6
PHTF1-204ENST00000369604 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
PHTF1-204ENST00000369604 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
PHTF1-204ENST00000369604 CDK13Q14004 1512 aaKnown RBP18.77■□□□□ 0.6
PHTF1-204ENST00000369604 ABCC5O15440 1437 aa18.77■□□□□ 0.6
PHTF1-204ENST00000369604 FAM43AQ8N2R8 423 aa18.76■□□□□ 0.59
PHTF1-204ENST00000369604 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
PHTF1-204ENST00000369604 EPRSP07814 1512 aaKnown RBP18.76■□□□□ 0.59
PHTF1-204ENST00000369604 DCAF11Q8TEB1 546 aa18.76■□□□□ 0.59
PHTF1-204ENST00000369604 CENPQQ7L2Z9 268 aaPredicted RBP18.75■□□□□ 0.59
PHTF1-204ENST00000369604 ARXQ96QS3 562 aa18.73■□□□□ 0.59
PHTF1-204ENST00000369604 KIAA1107Q9UPP5 1409 aa18.73■□□□□ 0.59
PHTF1-204ENST00000369604 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms