RNA–Protein interactions for RNA: ENST00000368463.7

PBXIP1-202, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBXIP1, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-202ENST00000368463 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
PBXIP1-202ENST00000368463 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
PBXIP1-202ENST00000368463 FYCO1Q9BQS8 1478 aa19.31■□□□□ 0.68
PBXIP1-202ENST00000368463 CARD11Q9BXL7 1154 aa19.3■□□□□ 0.68
PBXIP1-202ENST00000368463 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
PBXIP1-202ENST00000368463 CC2D1BQ5T0F9 858 aaKnown RBP19.29■□□□□ 0.68
PBXIP1-202ENST00000368463 FBLN2P98095 1184 aa19.29■□□□□ 0.68
PBXIP1-202ENST00000368463 PKD2Q13563 968 aa19.29■□□□□ 0.68
PBXIP1-202ENST00000368463 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
PBXIP1-202ENST00000368463 MAP3K1Q13233 1512 aa19.28■□□□□ 0.68
PBXIP1-202ENST00000368463 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
PBXIP1-202ENST00000368463 KDM6BO15054 1643 aa19.26■□□□□ 0.67
PBXIP1-202ENST00000368463 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
PBXIP1-202ENST00000368463 ARXQ96QS3 562 aa19.23■□□□□ 0.67
PBXIP1-202ENST00000368463 EIF5BO60841 1220 aaKnown RBP19.23■□□□□ 0.67
PBXIP1-202ENST00000368463 PDE4AP27815 886 aa19.22■□□□□ 0.67
PBXIP1-202ENST00000368463 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
PBXIP1-202ENST00000368463 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
PBXIP1-202ENST00000368463 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
PBXIP1-202ENST00000368463 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
PBXIP1-202ENST00000368463 PNISRQ8TF01 805 aaKnown RBP19.21■□□□□ 0.67
PBXIP1-202ENST00000368463 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
PBXIP1-202ENST00000368463 USP47Q96K76 1375 aa19.21■□□□□ 0.67
PBXIP1-202ENST00000368463 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
PBXIP1-202ENST00000368463 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
PBXIP1-202ENST00000368463 DENND4BO75064 1496 aaPredicted RBP19.2■□□□□ 0.66
PBXIP1-202ENST00000368463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■■■■□ 21
PBXIP1-202ENST00000368463 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
PBXIP1-202ENST00000368463 DAXXQ9UER7 740 aaPredicted RBP19.19■□□□□ 0.66
PBXIP1-202ENST00000368463 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
PBXIP1-202ENST00000368463 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
PBXIP1-202ENST00000368463 RRP1P56182 461 aaKnown RBP19.17■□□□□ 0.66
PBXIP1-202ENST00000368463 RGS3P49796 1198 aa19.17■□□□□ 0.66
PBXIP1-202ENST00000368463 BRPF3Q9ULD4 1205 aa19.16■□□□□ 0.66
PBXIP1-202ENST00000368463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.66
PBXIP1-202ENST00000368463 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
PBXIP1-202ENST00000368463 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
PBXIP1-202ENST00000368463 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
PBXIP1-202ENST00000368463 SMG6Q86US8 1419 aaKnown RBP19.12■□□□□ 0.65
PBXIP1-202ENST00000368463 C20orf194Q5TEA3 1177 aa19.12■□□□□ 0.65
PBXIP1-202ENST00000368463 CRBNQ96SW2 442 aa19.12■□□□□ 0.65
PBXIP1-202ENST00000368463 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
PBXIP1-202ENST00000368463 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
PBXIP1-202ENST00000368463 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.64
PBXIP1-202ENST00000368463 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
PBXIP1-202ENST00000368463 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
PBXIP1-202ENST00000368463 NUP155O75694 1391 aa19.04■□□□□ 0.64
PBXIP1-202ENST00000368463 BACH2Q9BYV9 841 aa19.04■□□□□ 0.64
PBXIP1-202ENST00000368463 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
PBXIP1-202ENST00000368463 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
PBXIP1-202ENST00000368463 TCERG1O14776 1098 aaKnown RBP19.02■□□□□ 0.63
PBXIP1-202ENST00000368463 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
PBXIP1-202ENST00000368463 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
PBXIP1-202ENST00000368463 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
PBXIP1-202ENST00000368463 RPRD2Q5VT52 1461 aaKnown RBP19■□□□□ 0.63
PBXIP1-202ENST00000368463 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
PBXIP1-202ENST00000368463 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
PBXIP1-202ENST00000368463 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
PBXIP1-202ENST00000368463 SPATA31E1Q6ZUB1 1445 aa18.98■□□□□ 0.63
PBXIP1-202ENST00000368463 ABCC5O15440 1437 aa18.97■□□□□ 0.63
PBXIP1-202ENST00000368463 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
PBXIP1-202ENST00000368463 DAPK1P53355 1430 aa18.97■□□□□ 0.63
PBXIP1-202ENST00000368463 THOC2Q8NI27 1593 aaKnown RBP18.97■□□□□ 0.63
PBXIP1-202ENST00000368463 ROCK2O75116 1388 aaKnown RBP18.97■□□□□ 0.63
PBXIP1-202ENST00000368463 UGGT2Q9NYU1 1516 aa18.97■□□□□ 0.63
PBXIP1-202ENST00000368463 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
PBXIP1-202ENST00000368463 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
PBXIP1-202ENST00000368463 NFKBIBQ15653 356 aa18.96■□□□□ 0.63
PBXIP1-202ENST00000368463 PANK3Q9H999 370 aa18.96■□□□□ 0.63
PBXIP1-202ENST00000368463 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
PBXIP1-202ENST00000368463 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
PBXIP1-202ENST00000368463 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
PBXIP1-202ENST00000368463 TEX14Q8IWB6 1497 aa18.94■□□□□ 0.62
PBXIP1-202ENST00000368463 KIF15Q9NS87 1388 aa18.94■□□□□ 0.62
PBXIP1-202ENST00000368463 NEUROD2Q15784 382 aa18.94■□□□□ 0.62
PBXIP1-202ENST00000368463 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
PBXIP1-202ENST00000368463 TSPY4P0CV99 314 aa18.93■□□□□ 0.62
PBXIP1-202ENST00000368463 TSPY10P0CW01 314 aa18.93■□□□□ 0.62
PBXIP1-202ENST00000368463 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
PBXIP1-202ENST00000368463 FRAT2O75474 233 aaPredicted RBP18.93■□□□□ 0.62
PBXIP1-202ENST00000368463 ADAMTS8Q9UP79 889 aa18.92■□□□□ 0.62
PBXIP1-202ENST00000368463 SLKQ9H2G2 1235 aaPredicted RBP18.91■□□□□ 0.62
PBXIP1-202ENST00000368463 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
PBXIP1-202ENST00000368463 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
PBXIP1-202ENST00000368463 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
PBXIP1-202ENST00000368463 PRDM2Q13029 1718 aa18.89■□□□□ 0.62
PBXIP1-202ENST00000368463 KTN1Q86UP2 1357 aaKnown RBP18.89■□□□□ 0.62
PBXIP1-202ENST00000368463 GSE1Q14687 1217 aa18.89■□□□□ 0.61
PBXIP1-202ENST00000368463 RALBP1Q15311 655 aa18.89■□□□□ 0.61
PBXIP1-202ENST00000368463 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
PBXIP1-202ENST00000368463 CTTNBP2Q8WZ74 1663 aa18.88■□□□□ 0.61
PBXIP1-202ENST00000368463 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
PBXIP1-202ENST00000368463 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
PBXIP1-202ENST00000368463 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
PBXIP1-202ENST00000368463 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
PBXIP1-202ENST00000368463 HECW1Q76N89 1606 aa18.83■□□□□ 0.6
PBXIP1-202ENST00000368463 BCAR3O75815 825 aa18.82■□□□□ 0.6
PBXIP1-202ENST00000368463 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
PBXIP1-202ENST00000368463 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
PBXIP1-202ENST00000368463 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms