RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 CUL7Q14999 1698 aa12.82□□□□□ -0.36
CACNA1S-202ENST00000367338 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
CACNA1S-202ENST00000367338 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
CACNA1S-202ENST00000367338 NUP155O75694 1391 aa12.81□□□□□ -0.36
CACNA1S-202ENST00000367338 TMF1P82094 1093 aa12.81□□□□□ -0.36
CACNA1S-202ENST00000367338 FOXD1Q16676 465 aa12.81□□□□□ -0.36
CACNA1S-202ENST00000367338 AQRO60306 1485 aaKnown RBP eCLIP12.81□□□□□ -0.36
CACNA1S-202ENST00000367338 KANK1Q14678 1352 aa12.81□□□□□ -0.36
CACNA1S-202ENST00000367338 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
CACNA1S-202ENST00000367338 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
CACNA1S-202ENST00000367338 RALBP1Q15311 655 aa12.79□□□□□ -0.36
CACNA1S-202ENST00000367338 HECW1Q76N89 1606 aa12.77□□□□□ -0.37
CACNA1S-202ENST00000367338 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
CACNA1S-202ENST00000367338 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
CACNA1S-202ENST00000367338 KTN1Q86UP2 1357 aaKnown RBP12.76□□□□□ -0.37
CACNA1S-202ENST00000367338 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
CACNA1S-202ENST00000367338 LAMC3Q9Y6N6 1575 aa12.76□□□□□ -0.37
CACNA1S-202ENST00000367338 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
CACNA1S-202ENST00000367338 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
CACNA1S-202ENST00000367338 HFM1A2PYH4 1435 aa12.74□□□□□ -0.37
CACNA1S-202ENST00000367338 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
CACNA1S-202ENST00000367338 MRC2Q9UBG0 1479 aa12.74□□□□□ -0.37
CACNA1S-202ENST00000367338 MYH16Q9H6N6 1097 aa12.74□□□□□ -0.37
CACNA1S-202ENST00000367338 NESP48681 1621 aa12.74□□□□□ -0.37
CACNA1S-202ENST00000367338 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
CACNA1S-202ENST00000367338 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
CACNA1S-202ENST00000367338 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
CACNA1S-202ENST00000367338 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
CACNA1S-202ENST00000367338 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
CACNA1S-202ENST00000367338 CC2D1BQ5T0F9 858 aaKnown RBP12.7□□□□□ -0.38
CACNA1S-202ENST00000367338 ARID4BQ4LE39 1312 aaPredicted RBP12.7□□□□□ -0.38
CACNA1S-202ENST00000367338 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
CACNA1S-202ENST00000367338 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
CACNA1S-202ENST00000367338 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNA1S-202ENST00000367338 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
CACNA1S-202ENST00000367338 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
CACNA1S-202ENST00000367338 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
CACNA1S-202ENST00000367338 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
CACNA1S-202ENST00000367338 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
CACNA1S-202ENST00000367338 PTPRGP23470 1445 aa12.67□□□□□ -0.38
CACNA1S-202ENST00000367338 CNTLNQ9NXG0 1405 aa12.67□□□□□ -0.38
CACNA1S-202ENST00000367338 BECN1Q14457 450 aa12.66□□□□□ -0.38
CACNA1S-202ENST00000367338 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
CACNA1S-202ENST00000367338 USP47Q96K76 1375 aa12.66□□□□□ -0.38
CACNA1S-202ENST00000367338 NBR1Q14596 966 aa12.66□□□□□ -0.38
CACNA1S-202ENST00000367338 ZBED9Q6R2W3 1325 aa12.65□□□□□ -0.38
CACNA1S-202ENST00000367338 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
CACNA1S-202ENST00000367338 PDE3BQ13370 1112 aa12.65□□□□□ -0.39
CACNA1S-202ENST00000367338 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
CACNA1S-202ENST00000367338 MYBBP1AQ9BQG0 1328 aaKnown RBP12.64□□□□□ -0.39
CACNA1S-202ENST00000367338 NOP58Q9Y2X3 529 aaKnown RBP12.63□□□□□ -0.39
CACNA1S-202ENST00000367338 IQGAP2Q13576 1575 aa12.63□□□□□ -0.39
CACNA1S-202ENST00000367338 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
CACNA1S-202ENST00000367338 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
CACNA1S-202ENST00000367338 WDR97A6NE52 1622 aa12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 ANKRD50Q9ULJ7 1429 aa12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 RCAN3Q9UKA8 241 aa12.61□□□□□ -0.39
CACNA1S-202ENST00000367338 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
CACNA1S-202ENST00000367338 NAIPQ13075 1403 aa12.6□□□□□ -0.39
CACNA1S-202ENST00000367338 SPAG9O60271 1321 aaKnown RBP12.6□□□□□ -0.39
CACNA1S-202ENST00000367338 KIAA0586Q9BVV6 1533 aa12.6□□□□□ -0.39
CACNA1S-202ENST00000367338 MS4A1P11836 297 aa12.6□□□□□ -0.39
CACNA1S-202ENST00000367338 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
CACNA1S-202ENST00000367338 DAPK1P53355 1430 aa12.59□□□□□ -0.39
CACNA1S-202ENST00000367338 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
CACNA1S-202ENST00000367338 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
CACNA1S-202ENST00000367338 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
CACNA1S-202ENST00000367338 ST20-MTHFSA0A0A6YYL1 179 aa12.57□□□□□ -0.4
CACNA1S-202ENST00000367338 SNAPC4Q5SXM2 1469 aa12.57□□□□□ -0.4
CACNA1S-202ENST00000367338 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
CACNA1S-202ENST00000367338 SYNJ2O15056 1496 aa12.57□□□□□ -0.4
CACNA1S-202ENST00000367338 WASHC2AQ641Q2 1341 aa12.57□□□□□ -0.4
CACNA1S-202ENST00000367338 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
CACNA1S-202ENST00000367338 MAPK8IP3Q9UPT6 1336 aa12.56□□□□□ -0.4
CACNA1S-202ENST00000367338 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
CACNA1S-202ENST00000367338 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
CACNA1S-202ENST00000367338 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
CACNA1S-202ENST00000367338 KIAA1107Q9UPP5 1409 aa12.56□□□□□ -0.4
CACNA1S-202ENST00000367338 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
CACNA1S-202ENST00000367338 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
CACNA1S-202ENST00000367338 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
CACNA1S-202ENST00000367338 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
CACNA1S-202ENST00000367338 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
CACNA1S-202ENST00000367338 POGKQ9P215 609 aa12.54□□□□□ -0.4
CACNA1S-202ENST00000367338 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
CACNA1S-202ENST00000367338 TRIM44Q96DX7 344 aaPredicted RBP12.53□□□□□ -0.4
CACNA1S-202ENST00000367338 AKNAQ7Z591 1439 aa12.52□□□□□ -0.41
CACNA1S-202ENST00000367338 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
CACNA1S-202ENST00000367338 KIF3BO15066 747 aa12.51□□□□□ -0.41
CACNA1S-202ENST00000367338 C9orf84Q5VXU9 1444 aa12.51□□□□□ -0.41
CACNA1S-202ENST00000367338 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
CACNA1S-202ENST00000367338 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
CACNA1S-202ENST00000367338 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
CACNA1S-202ENST00000367338 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
CACNA1S-202ENST00000367338 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
CACNA1S-202ENST00000367338 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms