RNA–Protein interactions for RNA: ENST00000359345.5

SLFNL1-202, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 4,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-202ENST00000359345 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
SLFNL1-202ENST00000359345 NUDCQ9Y266 331 aa16.52■□□□□ 0.24
SLFNL1-202ENST00000359345 KTN1Q86UP2 1357 aaKnown RBP16.52■□□□□ 0.23
SLFNL1-202ENST00000359345 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
SLFNL1-202ENST00000359345 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
SLFNL1-202ENST00000359345 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
SLFNL1-202ENST00000359345 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
SLFNL1-202ENST00000359345 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
SLFNL1-202ENST00000359345 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
SLFNL1-202ENST00000359345 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
SLFNL1-202ENST00000359345 MYOM3Q5VTT5 1437 aa16.5■□□□□ 0.23
SLFNL1-202ENST00000359345 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
SLFNL1-202ENST00000359345 RALBP1Q15311 655 aa16.49■□□□□ 0.23
SLFNL1-202ENST00000359345 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
SLFNL1-202ENST00000359345 DEKP35659 375 aaKnown RBP16.46■□□□□ 0.23
SLFNL1-202ENST00000359345 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
SLFNL1-202ENST00000359345 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
SLFNL1-202ENST00000359345 NCOA2Q15596 1464 aa16.44■□□□□ 0.22
SLFNL1-202ENST00000359345 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
SLFNL1-202ENST00000359345 USP47Q96K76 1375 aa16.43■□□□□ 0.22
SLFNL1-202ENST00000359345 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
SLFNL1-202ENST00000359345 BICRAQ9NZM4 1560 aa16.42■□□□□ 0.22
SLFNL1-202ENST00000359345 BECN1Q14457 450 aa16.42■□□□□ 0.22
SLFNL1-202ENST00000359345 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
SLFNL1-202ENST00000359345 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
SLFNL1-202ENST00000359345 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
SLFNL1-202ENST00000359345 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
SLFNL1-202ENST00000359345 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
SLFNL1-202ENST00000359345 NESP48681 1621 aa16.39■□□□□ 0.21
SLFNL1-202ENST00000359345 TIAM1Q13009 1591 aa16.39■□□□□ 0.21
SLFNL1-202ENST00000359345 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.21
SLFNL1-202ENST00000359345 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
SLFNL1-202ENST00000359345 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.21
SLFNL1-202ENST00000359345 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
SLFNL1-202ENST00000359345 GGT6Q6P531 493 aa16.36■□□□□ 0.21
SLFNL1-202ENST00000359345 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
SLFNL1-202ENST00000359345 KANK1Q14678 1352 aa16.36■□□□□ 0.21
SLFNL1-202ENST00000359345 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
SLFNL1-202ENST00000359345 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
SLFNL1-202ENST00000359345 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
SLFNL1-202ENST00000359345 POGKQ9P215 609 aa16.35■□□□□ 0.21
SLFNL1-202ENST00000359345 PANK3Q9H999 370 aa16.35■□□□□ 0.21
SLFNL1-202ENST00000359345 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
SLFNL1-202ENST00000359345 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
SLFNL1-202ENST00000359345 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
SLFNL1-202ENST00000359345 ANP32BQ92688 251 aaKnown RBP16.34■□□□□ 0.21
SLFNL1-202ENST00000359345 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
SLFNL1-202ENST00000359345 KIF3BO15066 747 aa16.33■□□□□ 0.2
SLFNL1-202ENST00000359345 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
SLFNL1-202ENST00000359345 PLIN1O60240 522 aa16.33■□□□□ 0.2
SLFNL1-202ENST00000359345 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.2
SLFNL1-202ENST00000359345 NBPF8Q3BBV2 869 aa16.32■□□□□ 0.2
SLFNL1-202ENST00000359345 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
SLFNL1-202ENST00000359345 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
SLFNL1-202ENST00000359345 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
SLFNL1-202ENST00000359345 IPO9Q96P70 1041 aaKnown RBP16.31■□□□□ 0.2
SLFNL1-202ENST00000359345 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
SLFNL1-202ENST00000359345 HFM1A2PYH4 1435 aa16.31■□□□□ 0.2
SLFNL1-202ENST00000359345 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
SLFNL1-202ENST00000359345 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
SLFNL1-202ENST00000359345 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
SLFNL1-202ENST00000359345 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
SLFNL1-202ENST00000359345 STK26Q9P289 416 aa16.29■□□□□ 0.2
SLFNL1-202ENST00000359345 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
SLFNL1-202ENST00000359345 PLEKHG5O94827 1062 aa16.27■□□□□ 0.19
SLFNL1-202ENST00000359345 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.19
SLFNL1-202ENST00000359345 PTPRGP23470 1445 aa16.26■□□□□ 0.19
SLFNL1-202ENST00000359345 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
SLFNL1-202ENST00000359345 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
SLFNL1-202ENST00000359345 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
SLFNL1-202ENST00000359345 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
SLFNL1-202ENST00000359345 NAIPQ13075 1403 aa16.24■□□□□ 0.19
SLFNL1-202ENST00000359345 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
SLFNL1-202ENST00000359345 PEG3Q9GZU2 1588 aa16.23■□□□□ 0.19
SLFNL1-202ENST00000359345 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
SLFNL1-202ENST00000359345 SPRYD3Q8NCJ5 442 aa16.21■□□□□ 0.19
SLFNL1-202ENST00000359345 CLUAP1Q96AJ1 413 aa16.21■□□□□ 0.19
SLFNL1-202ENST00000359345 PDE4AP27815 886 aa16.21■□□□□ 0.19
SLFNL1-202ENST00000359345 C14orf37Q86TY3 774 aa16.21■□□□□ 0.18
SLFNL1-202ENST00000359345 CRBNQ96SW2 442 aa16.21■□□□□ 0.18
SLFNL1-202ENST00000359345 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
SLFNL1-202ENST00000359345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
SLFNL1-202ENST00000359345 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
SLFNL1-202ENST00000359345 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
SLFNL1-202ENST00000359345 MS4A1P11836 297 aa16.19■□□□□ 0.18
SLFNL1-202ENST00000359345 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
SLFNL1-202ENST00000359345 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
SLFNL1-202ENST00000359345 MLECQ14165 292 aa16.18■□□□□ 0.18
SLFNL1-202ENST00000359345 C11orf95C9JLR9 678 aaPredicted RBP16.17■□□□□ 0.18
SLFNL1-202ENST00000359345 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
SLFNL1-202ENST00000359345 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
SLFNL1-202ENST00000359345 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
SLFNL1-202ENST00000359345 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
SLFNL1-202ENST00000359345 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
SLFNL1-202ENST00000359345 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
SLFNL1-202ENST00000359345 APAF1O14727 1248 aa16.16■□□□□ 0.18
SLFNL1-202ENST00000359345 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
SLFNL1-202ENST00000359345 SOX12O15370 315 aa16.15■□□□□ 0.18
SLFNL1-202ENST00000359345 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
SLFNL1-202ENST00000359345 UNC13AQ9UPW8 1703 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms